prot_F-serratus_M_contig110.947.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig110.947.1
Unique Nameprot_F-serratus_M_contig110.947.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length534
Homology
BLAST of mRNA_F-serratus_M_contig110.947.1 vs. uniprot
Match: A0A6H5L0W0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L0W0_9PHAE)

HSP 1 Score: 424 bits (1089), Expect = 3.100e-140
Identity = 247/537 (46.00%), Postives = 336/537 (62.57%), Query Frame = 0
Query:    6 TTSSSG--EWWESISAYENSYVPDSFTPSSSVEANHDLLAGLRDNDFDITNQDYTYGLLTLALVFLVAGVLACCLLPCIYTCLSKSHKERLAERLRIGHSSNTKLRGNIIMVVAVVAAIGTAAGAVWGLAETDHGLTVIENDTQEITDDLREVLNLPNDTSNALDGLSTSYDSLVENLDVCSYTTTISGYQISSSLGSDLVPSSEVEDFITNVEDTVDSLDSETLDELADDVQAVSDAVETTKGVRKGVVWPVLSLSILMIIIFLVISLGVYGIIAWQMHNCTPIANWVSPCSIFLAVIIWLSAASAVTLSALTGDFCIDPDTNVDTLLVADETNDAMDETLTGLIDYYTGDCTSENVAIDVIVEAQTIAISFINSTLPSLYELADACPDISSFVQDVDDSMRDLWTVLQNAGELTSCENLNAPYQDAVYTELCTSLPAGLLGFWVSCVILTVLLLLLAVLWSNMLKQVRTDDHAAVIEEEQRRWTSGTWHSGGRVPSLQSGTRDSRRTETGAP----------VQRAVEMSNPQRA 530
            TTS++G   W++ IS Y + Y P +FTP  SVEANHDLL GLR+NDFD+ +  Y+ GL+TL +VFLVAG+L           L  S +ERL ER++ G    T   GNI+MV+A VAAI +AAGA+WGL   D GLT IE+ TQ +  D+  +LNL NDTS ALD ++ SY++L E++D C           + ++ S L+ + ++     +V+  +D +  +   ELADDVQA+SDAV  T+G RKG++WPVL LS++    F+ +S+  Y  +A+   +C P +  ++PC+IF+AV+IW+ AA AV+LSALTGDFCIDPD N + L+      D  D  +  LI YYTGDCTSEN A+D I+ AQ +A+  I S +P+LY+L  AC D++  VQ +D+S+   WT+L++AGEL+SCENLN  YQ AVY ELC  LP GLLGFWVSC  LTVLLL+LA+ W  ML+Q  T++ A+  E   R+          R   L    R SRR     P          VQR V +  PQ A
Sbjct:    3 TTSTTGGDAWYDKISVYSSDYEPATFTPGPSVEANHDLLDGLRENDFDVEDAQYSAGLVTLIIVFLVAGLLXXXXXXXXXXXLGTSRQERLRERMKFG--KQTHYGGNILMVLASVAAIASAAGAIWGLQRADSGLTNIEDATQNMATDMLTILNLANDTSVALDQVTASYEALQESVDGCD----------NGAILSSLLDAFDINSLTASVQAEIDDVSEDNFGELADDVQAISDAVSDTEGARKGLLWPVLILSLMFTAFFVAVSVSTYECVAFGYRDCAPASCCINPCTIFVAVVIWICAALAVSLSALTGDFCIDPDANANELIT-----DNTDGEIADLITYYTGDCTSENAAVDAIITAQEVAVPIIQSVVPTLYQLEAACSDLAEPVQTLDNSLESFWTILEDAGELSSCENLNGLYQAAVYDELCKGLPQGLLGFWVSCAFLTVLLLILAIQWGRMLRQQTTEEDASTAEAMNRQ----------RAGWLVVSKRFSRRNFVANPPAPPHGASSHVQRPVALERPQHA 512          
BLAST of mRNA_F-serratus_M_contig110.947.1 vs. uniprot
Match: D7FQM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM7_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 4.480e-33
Identity = 88/256 (34.38%), Postives = 145/256 (56.64%), Query Frame = 0
Query:   60 GLLTLALVFLVAGVLACCLLPCIYTCLSKSHKERLAERLRIGHSSNTKLRGNIIMVVAVVAAIGTAAGAVWGLAETDHGLTVIENDTQEITDDLREVLNLPNDTSNALDGLSTSYDSLVENLDVCSYTTTISGYQISSSLGSDLVPSSEVEDFITNVEDTVDSLDSETLDELADDVQAVSDAVETTKGVRKGVVWPVLSLSILMIIIFLVISLGVYGIIAWQMHNC-TPIANWVSPCSIFLAVIIWLSAASAVTLS 314
            GLLTLA +F+ AG+LAC +LPC+Y C  KS +  L  RL  G   +    G ++MV+   AA+   + A+ GL + D G+ VIE+ T+ I  D+ E++ LP DT+  L  +S SYD L  ++  C           +  +   +V   +     + V+  +D +D  +L ++A  VQ +SDA+ TTK +R+ +VWP + L+++ + +F++IS   Y  +A    +C  P     +P  +FLAV+++L AAS ++LS
Sbjct:    7 GLLTLASIFVAAGLLACAVLPCLYCCFRKSRQAHLVTRLENG--PHRHCAGGLLMVLVSWAALACCSSAIAGLEKADSGMLVIEDRTEAIAKDVLEIIGLPADTAVGLGLVSDSYDVLEASVGDCE----------NPDIAQAIVAGLDFGSLASEVQTAIDEIDRTSLADIAKQVQDISDAMYTTKVLRRTIVWPTIILALVFVALFILISCTTYEAVACARPSCRAPCTGGFAPFVVFLAVVVYLCAASVISLS 250          
BLAST of mRNA_F-serratus_M_contig110.947.1 vs. uniprot
Match: A0A835Z969_9STRA (Tweety-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z969_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 2.860e-7
Identity = 121/529 (22.87%), Postives = 208/529 (39.32%), Query Frame = 0
Query:   14 WESISAYE-NSYVPDSFTPSSSVEANHDLLAGLRDNDFDITNQDYTYGLLTLALVFLVAGVLACCLLPCIYTCLSKSHKERLAERLRIGHSSNTKLRGNIIMVVAVVAAIGTAAGAVWGLAETDHGLTVIENDTQEITDDLRE----VLNLPNDTSNALDGLST---SYDSLVENLDVCSYTTTISGYQISSSLGSDLVPSSEVEDFITNVEDTVDSL----DSETLDELADDVQAVSDAVETTKGVRKGVVWPVLSLSILMIIIF-----LVISLGVYGIIAWQMHNCTPIANWVSPCSIFLAVIIWLSAASAVTLSALTGDFCIDPDTNVDTLLVADETNDAMDETLTGLIDYYTGDCTSENVAIDVIVEAQTIAISFINSTLPSLYEL-------ADACPD-ISSFVQDVDDSMRDLWTVLQNAGELTSCENLNAPYQDAVYTELCTSLPAGLLGFWVSCVILTVLLLLLAVLWSNMLKQVRT-----------DDHAAVIEEEQRRWTSGTWHSGGRVPSLQSGT 506
            WES      + Y    ++P+S  E NHD  +G+R+N FD +N+DYT G++                                      G +   +  GN   +   V  +  AAGA   L     G   + +   + +D + E    V  + N   NA    +T   + D+L+EN   C +                 V    + D  T +ED +  L     S  L +++  +  V+  V+ T   R+ +V  + +  +  ++ F     LV+  G       +   C  +   V P ++F+AV  W   A+A   + L GDFC +P+ NV  ++V D            L+ +Y   CT +N     +  AQ   +    S  P   +L       +  C   +++F+ +  ++   L+ VL  A    SC  +N  + DAV+   C  L   +   ++  ++L+V L+L  ++W  M+ Q              +D  AV + E     SG   +GG+V  +QS T
Sbjct:   55 WESAQVVPVDDYQAPVYSPNSVAEINHDGFSGIRENQFDPSNKDYTDGIIW-------------------------------------GKAKRKEPGGNGAKICFWVLWLIAAAGAGVSLG----GFIDLNSQVNDASDIMVEAAGIVTGVQNLAYNAFGTATTIIDTIDNLLENAQQCVFAQ---------------VDVQHLTDLRTQLEDIIARLLQVQQSTALQDISTKLLHVNQQVDNTVVWRRNLVIVIFTFDLACLLAFAALGYLVVKSGGRTSDMSKRTKCC-VTCVVVPLAMFIAVGSWGVLAAASAGAMLDGDFCQNPNANV-LVMVKDNP----------LVTFYMT-CTGDNAVYTALEVAQEAMLQAATSLAPKAAQLETLAQRASPTCETLVTTFLTNFHNASYQLFNVLGEAQTALSCRTINGLFVDAVHQTACDDLNNSIGLLFLGLLMLSVPLMLAVLVWRLMVAQAEALEKRYQEEEDLNDAEAVAKTEGMPLKSG---AGGKVMQMQSDT 511          
BLAST of mRNA_F-serratus_M_contig110.947.1 vs. uniprot
Match: D7FQM8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM8_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 1.460e-6
Identity = 23/45 (51.11%), Postives = 31/45 (68.89%), Query Frame = 0
Query:   13 WWESISAYENSYVPDSFTPSSSVEANHDLLAGLRDNDFDITNQDY 57
            WW+ I  +E+ +VP +FTP  SVEANH LL   R+ DFDI + +Y
Sbjct:    7 WWQEIELFESDFVPATFTPGESVEANHALLRAFREQDFDIRDLNY 51          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig110.947.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L0W0_9PHAE3.100e-14046.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FQM7_ECTSI4.480e-3334.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z969_9STRA2.860e-722.87Tweety-domain-containing protein n=1 Tax=Tribonema... [more]
D7FQM8_ECTSI1.460e-651.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006990TweetyPFAMPF04906Tweetycoord: 47..471
e-value: 8.1E-9
score: 34.6
IPR006990TweetyPANTHERPTHR12424TWEETY-RELATEDcoord: 23..514
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 445..465
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 88..107
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 108..133
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..58
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 288..307
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 252..276
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 277..287
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 466..533
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 308..444
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 134..251
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..87
NoneNo IPR availableTMHMMTMhelixcoord: 291..313
NoneNo IPR availableTMHMMTMhelixcoord: 444..466
NoneNo IPR availableTMHMMTMhelixcoord: 108..130
NoneNo IPR availableTMHMMTMhelixcoord: 65..87
NoneNo IPR availableTMHMMTMhelixcoord: 256..278

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig110contigF-serratus_M_contig110:390490..401716 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig110.947.1mRNA_F-serratus_M_contig110.947.1Fucus serratus malemRNAF-serratus_M_contig110 389001..401880 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig110.947.1 ID=prot_F-serratus_M_contig110.947.1|Name=mRNA_F-serratus_M_contig110.947.1|organism=Fucus serratus male|type=polypeptide|length=534bp
MSDGSTTSSSGEWWESISAYENSYVPDSFTPSSSVEANHDLLAGLRDNDF
DITNQDYTYGLLTLALVFLVAGVLACCLLPCIYTCLSKSHKERLAERLRI
GHSSNTKLRGNIIMVVAVVAAIGTAAGAVWGLAETDHGLTVIENDTQEIT
DDLREVLNLPNDTSNALDGLSTSYDSLVENLDVCSYTTTISGYQISSSLG
SDLVPSSEVEDFITNVEDTVDSLDSETLDELADDVQAVSDAVETTKGVRK
GVVWPVLSLSILMIIIFLVISLGVYGIIAWQMHNCTPIANWVSPCSIFLA
VIIWLSAASAVTLSALTGDFCIDPDTNVDTLLVADETNDAMDETLTGLID
YYTGDCTSENVAIDVIVEAQTIAISFINSTLPSLYELADACPDISSFVQD
VDDSMRDLWTVLQNAGELTSCENLNAPYQDAVYTELCTSLPAGLLGFWVS
CVILTVLLLLLAVLWSNMLKQVRTDDHAAVIEEEQRRWTSGTWHSGGRVP
SLQSGTRDSRRTETGAPVQRAVEMSNPQRAERA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006990Tweety