prot_F-serratus_M_contig11.908.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig11.908.1
Unique Nameprot_F-serratus_M_contig11.908.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length114
Homology
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BLAST of mRNA_F-serratus_M_contig11.908.1 vs. uniprot
Match: D7G1H6_ECTSI (cwf21 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1H6_ECTSI)

HSP 1 Score: 179 bits (453), Expect = 2.660e-51
Identity = 93/113 (82.30%), Postives = 104/113 (92.04%), Query Frame = 0 
Query:    1 MYNNIGLRTPRGSGTSGHVMSNRSHVRGQAFRMGVSRNQGKLQSQNWDEPAQRKANGELLDHQQKRKVEAKIFELQEAMAERGYSDAEIEAKVAEVRKEVEERKNSGQKASLL 113
            MYNN+G+RTPRGSGTSGHVMSNRSHVR QAFRMG+ RN GKLQ+++W+EP  RKAN ELLDHQ+KRKVEAKIFELQEAMA+RGYSDAEIE KVAEVRK +EER+ SGQKASLL
Sbjct:   32 MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNTGKLQARDWEEPPPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEEREGSGQKASLL 144
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BLAST of mRNA_F-serratus_M_contig11.908.1 vs. uniprot
Match: A0A6H5KXT9_9PHAE (cwf21 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXT9_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 4.340e-50
Identity = 92/112 (82.14%), Postives = 103/112 (91.96%), Query Frame = 0 
Query:    1 MYNNIGLRTPRGSGTSGHVMSNRSHVRGQAFRMGVSRNQGKLQSQNWDEPAQRKANGELLDHQQKRKVEAKIFELQEAMAERGYSDAEIEAKVAEVRKEVEERKNSGQKASL 112
            MYNN+G+RTPRGSGTSGHVMSNRSHVR QAFRMG+ RN GKLQ+++W+EP  RKAN ELLDHQ+KRKVEAKIFELQEAMA+RGYSDAEIE KVAEVRK +EER+ SGQKASL
Sbjct:    1 MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNTGKLQARDWEEPPPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEEREGSGQKASL 112
[Close]
BLAST of mRNA_F-serratus_M_contig11.908.1 vs. uniprot
Match: A0A836CB89_9STRA (cwf21 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB89_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.460e-30
Identity = 73/106 (68.87%), Postives = 83/106 (78.30%), Query Frame = 0 
Query:    1 MYNNIGLRTPRGSGTSGHVMSNRSHVRGQAFRMGVSRNQGKLQS-QNWDEP--AQRKANGELLDHQQKRKVEAKIFELQEAMAERGYSDAEIEAKVAEVRKEVEER 103
            MYN IGL TPRGSGTSGHVMSNRSHV+    R  + RNQ    S Q W  P  A +KAN ELL+H ++RKVEAKIFELQEAMAERGYSDA+IEAKVAEVR+E++ R
Sbjct:    1 MYNGIGLTTPRGSGTSGHVMSNRSHVKADRMRERMGRNQTVGGSDQAWAHPQGALKKANDELLEHARRRKVEAKIFELQEAMAERGYSDADIEAKVAEVRRELDVR 106
[Close]
BLAST of mRNA_F-serratus_M_contig11.908.1 vs. uniprot
Match: A0A7S3Y519_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y519_HETAK)

HSP 1 Score: 90.5 bits (223), Expect = 1.400e-20
Identity = 50/100 (50.00%), Postives = 70/100 (70.00%), Query Frame = 0 
Query:    1 MYNNIGLRTPRGSGTSGHVMSNRSHVRGQAFRMGVSRNQGKLQSQNWDEPAQRKANGELLDHQQKRKVEAKIFELQEAMAERGYSDAEIEAKVAEVRKEV 100
            MYN IGL T RGS T+G+V  N SHVR Q  R  V++N+G LQ   WD P Q++AN  +L+HQQKR++EAK+FELQ  + + G ++ EI+ K   +RK++
Sbjct:    1 MYNGIGLATVRGSSTNGYVQRNLSHVRTQQVRNQVAQNKGGLQD--WDAPKQKQANKAILEHQQKRQIEAKVFELQVQLEDEGLNEEEIDKKCQALRKKL 98
[Close]
BLAST of mRNA_F-serratus_M_contig11.908.1 vs. uniprot
Match: A0A061QRJ0_9CHLO (Serine/arginine repetitive matrix protein 2 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QRJ0_9CHLO)

HSP 1 Score: 89.0 bits (219), Expect = 2.280e-18
Identity = 52/103 (50.49%), Postives = 75/103 (72.82%), Query Frame = 0 
Query:    1 MYNNIGLRTPRGSGTSGHVMSNRSHVRGQAFRMGVSRNQG--KLQSQNWDEPAQRKANGELLDHQQKRKVEAKIFELQEAMAERGYSDAEIEAKVAEVRKEVE 101
            MYNNIGL TPRGSGTSG+V +N+ +++    R  V + Q      S N + P Q+KAN E+++H +KR++EAKIFELQ+ + E+GY+ AEIE +VAE+R ++E
Sbjct:    1 MYNNIGLLTPRGSGTSGYVSTNKFNLK----RTPVQQQQQPPNYDSLNAEGPQQKKANMEIVEHNRKREIEAKIFELQDTLEEKGYTPAEIEQEVAELRSQME 99
[Close]
BLAST of mRNA_F-serratus_M_contig11.908.1 vs. uniprot
Match: A0A8J9W4F0_BRALA (SRRM2 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9W4F0_BRALA)

HSP 1 Score: 85.9 bits (211), Expect = 3.260e-17
Identity = 49/107 (45.79%), Postives = 70/107 (65.42%), Query Frame = 0 
Query:    1 MYNNIGLRTPRGSGTSGHVMSNRSHVRGQAFRMGVSRNQGKLQSQNWDEPAQRKANGELLDHQQKRKVEAKIFELQEAMAERGYSDAEIEAKVAEVRKEVEERKNSG 107
            MYN IGL TPRGSGT+G+V  N +H+RG+  ++     +   + +  D    +K N E+LDH++KRKVE K  E+QE M E+GYS+ EIE KVA  R+ + E++  G
Sbjct:    1 MYNGIGLNTPRGSGTNGYVTRNWAHIRGRKEKVNYKTEE---EMKKLDAAMSKKPNQEILDHERKRKVELKCMEMQELMEEQGYSEEEIERKVATFRRMLMEKEGVG 104
[Close]
BLAST of mRNA_F-serratus_M_contig11.908.1 vs. uniprot
Match: A0A6P5AXA5_BRABE (serine/arginine repetitive matrix protein 2-like isoform X2 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5AXA5_BRABE)

HSP 1 Score: 85.9 bits (211), Expect = 3.260e-17
Identity = 49/107 (45.79%), Postives = 70/107 (65.42%), Query Frame = 0 
Query:    1 MYNNIGLRTPRGSGTSGHVMSNRSHVRGQAFRMGVSRNQGKLQSQNWDEPAQRKANGELLDHQQKRKVEAKIFELQEAMAERGYSDAEIEAKVAEVRKEVEERKNSG 107
            MYN IGL TPRGSGT+G+V  N +H+RG+  ++     +   + +  D    +K N E+LDH++KRKVE K  E+QE M E+GYS+ EIE KVA  R+ + E++  G
Sbjct:    1 MYNGIGLNTPRGSGTNGYVTRNWAHIRGRKEKVNYKTEE---EMKKLDAAMSKKPNQEILDHERKRKVELKCMEMQELMEEQGYSEEEIERKVATFRRMLMEKEGVG 104
[Close]
BLAST of mRNA_F-serratus_M_contig11.908.1 vs. uniprot
Match: A0A6P5AKB4_BRABE (serine/arginine repetitive matrix protein 2-like isoform X1 n=6 Tax=Branchiostoma TaxID=7737 RepID=A0A6P5AKB4_BRABE)

HSP 1 Score: 85.9 bits (211), Expect = 3.270e-17
Identity = 49/107 (45.79%), Postives = 70/107 (65.42%), Query Frame = 0 
Query:    1 MYNNIGLRTPRGSGTSGHVMSNRSHVRGQAFRMGVSRNQGKLQSQNWDEPAQRKANGELLDHQQKRKVEAKIFELQEAMAERGYSDAEIEAKVAEVRKEVEERKNSG 107
            MYN IGL TPRGSGT+G+V  N +H+RG+  ++     +   + +  D    +K N E+LDH++KRKVE K  E+QE M E+GYS+ EIE KVA  R+ + E++  G
Sbjct:    1 MYNGIGLNTPRGSGTNGYVTRNWAHIRGRKEKVNYKTEE---EMKKLDAAMSKKPNQEILDHERKRKVELKCMEMQELMEEQGYSEEEIERKVATFRRMLMEKEGVG 104
[Close]
BLAST of mRNA_F-serratus_M_contig11.908.1 vs. uniprot
Match: C3YB28_BRAFL (cwf21 domain-containing protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YB28_BRAFL)

HSP 1 Score: 84.7 bits (208), Expect = 8.410e-17
Identity = 48/107 (44.86%), Postives = 70/107 (65.42%), Query Frame = 0 
Query:    1 MYNNIGLRTPRGSGTSGHVMSNRSHVRGQAFRMGVSRNQGKLQSQNWDEPAQRKANGELLDHQQKRKVEAKIFELQEAMAERGYSDAEIEAKVAEVRKEVEERKNSG 107
            MYN IGL TPRGSGT+G+V  N +H+RG+  ++     +   + +  D    +K N E+LDH++KRKVE K  E+QE M E+GYS+ EI+ KVA  R+ + E++  G
Sbjct:    1 MYNGIGLNTPRGSGTNGYVTRNWAHIRGRKEKVNYKTEE---EMKKLDAAMSKKPNQEILDHERKRKVELKCMEMQELMEEQGYSEEEIDRKVATFRRMLMEKEGVG 104
[Close]
BLAST of mRNA_F-serratus_M_contig11.908.1 vs. uniprot
Match: UPI0015944EC1 (hypothetical protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI0015944EC1)

HSP 1 Score: 78.6 bits (192), Expect = 2.700e-16
Identity = 42/101 (41.58%), Postives = 69/101 (68.32%), Query Frame = 0 
Query:    1 MYNNIGLRTPRGSGTSGHVMSNRSHVRGQAFRMGVSRNQGKLQSQNWDEPAQRKANGELLDHQQKRKVEAKIFELQEAMAERGYSDAEIEAKVAEVRKEVE 101
            MYN IGL+TPRGSGT+GH+ +N+  V+ +  ++ V   +G  +S        RKAN ++L+H +KR+++ K+  L+E +A++GY+DAEI  K+ E R+ +E
Sbjct:    2 MYNGIGLQTPRGSGTNGHIQTNKFFVKSKTNKVLVDGGKG-YESGQGTAGVSRKANKDILEHDRKRQIQLKLLVLEEKLADQGYTDAEISEKLEEARRNLE 101
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig11.908.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1H6_ECTSI2.660e-5182.30cwf21 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KXT9_9PHAE4.340e-5082.14cwf21 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A836CB89_9STRA1.460e-3068.87cwf21 domain-containing protein n=1 Tax=Tribonema ... [more]
A0A7S3Y519_HETAK1.400e-2050.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A061QRJ0_9CHLO2.280e-1850.49Serine/arginine repetitive matrix protein 2 n=1 Ta... [more]
A0A8J9W4F0_BRALA3.260e-1745.79SRRM2 protein n=1 Tax=Branchiostoma lanceolatum Ta... [more]
A0A6P5AXA5_BRABE3.260e-1745.79serine/arginine repetitive matrix protein 2-like i... [more]
A0A6P5AKB4_BRABE3.270e-1745.79serine/arginine repetitive matrix protein 2-like i... [more]
C3YB28_BRAFL8.410e-1744.86cwf21 domain-containing protein n=1 Tax=Branchiost... [more]
UPI0015944EC12.700e-1641.58hypothetical protein n=1 Tax=Escherichia coli TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 84..104
NoneNo IPR availablePANTHERPTHR36562FAMILY NOT NAMEDcoord: 1..108
NoneNo IPR availablePANTHERPTHR36562:SF5SERINE/ARGININE REPETITIVE MATRIX 2coord: 1..108
IPR013170mRNA splicing factor Cwf21 domainSMARTSM01115cwf21_2coord: 60..105
e-value: 1.0E-6
score: 38.3
IPR013170mRNA splicing factor Cwf21 domainPFAMPF08312cwf21coord: 60..99
e-value: 2.8E-10
score: 40.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig11contigF-serratus_M_contig11:476717..483036 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig11.908.1mRNA_F-serratus_M_contig11.908.1Fucus serratus malemRNAF-serratus_M_contig11 473265..483036 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig11.908.1 ID=prot_F-serratus_M_contig11.908.1|Name=mRNA_F-serratus_M_contig11.908.1|organism=Fucus serratus male|type=polypeptide|length=114bp
MYNNIGLRTPRGSGTSGHVMSNRSHVRGQAFRMGVSRNQGKLQSQNWDEP
AQRKANGELLDHQQKRKVEAKIFELQEAMAERGYSDAEIEAKVAEVRKEV
EERKNSGQKASLLG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013170mRNA_splic_Cwf21_dom