prot_F-serratus_M_contig11.906.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig11.906.1
Unique Nameprot_F-serratus_M_contig11.906.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length318
Homology
BLAST of mRNA_F-serratus_M_contig11.906.1 vs. uniprot
Match: D7G1F1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1F1_ECTSI)

HSP 1 Score: 419 bits (1077), Expect = 9.220e-143
Identity = 215/294 (73.13%), Postives = 251/294 (85.37%), Query Frame = 0
Query:    1 MRVQVSTTKMSSYIDARGEVTAQSDWTVGRLKEEVEKKFPGKIPASLQRLFKGTQLLPSSVTLEELSEGGEGPLVLLLDNAPPIDSSRFDPDTAVPSRRDGQVEAFSACLAAQATLEQSLLGTMRGASDEADSELTRSLRMKADFENTKALLQRTLEERPDTSVGQQPPQQAFGVLHEALRPLAHSLDVNWLQSAQYAIFVYICAQFGAHGAVRRALTLMLIPLIFLAQTRPARVGLKLARNLAGEIPVLTQLVLGLLQAPGQVILSLDADAYTRNLYGPEGPTFDEAFLDSRG 294
            M++ VSTTK+SSYIDARGEV A+SDWTVG+LKEE+EKKFPG+IPASLQRLFKGTQLLPSS+TLEE SEG EGPL LLLDNAPPID+SRFDPDTAVP  +DGQVEAFSACLAAQ+TL+++LL  MRG + E D+EL+RS++MKADFENTKALLQRTL+E PD +  ++   + FG+LHEALRPLAH LDVNW+Q+AQY IF YICAQFGA G +RR  TLMLIP++ LAQTR ARVG K+ RNL  E+PVLTQL LGLLQAP QVI+S+D  AYTR LYGP GP +D+ FLD  G
Sbjct:  150 MQILVSTTKISSYIDARGEVAARSDWTVGKLKEELEKKFPGRIPASLQRLFKGTQLLPSSMTLEEASEGAEGPLSLLLDNAPPIDASRFDPDTAVPFSKDGQVEAFSACLAAQSTLQETLLAVMRGENSEDDAELSRSVKMKADFENTKALLQRTLDEVPDKTGDEE---ETFGILHEALRPLAHRLDVNWMQTAQYTIFTYICAQFGATGTIRRLATLMLIPMMLLAQTRSARVGAKMVRNLVAEVPVLTQLFLGLLQAPTQVIISVDPKAYTRGLYGPGGPKYDKEFLDEGG 440          
BLAST of mRNA_F-serratus_M_contig11.906.1 vs. uniprot
Match: K0RKX3_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RKX3_THAOC)

HSP 1 Score: 67.4 bits (163), Expect = 7.070e-9
Identity = 51/143 (35.66%), Postives = 69/143 (48.25%), Query Frame = 0
Query:  174 GVLHEALRPLAHSLDVNWLQSAQYAIFVYICAQFGAHGAVRRALTLMLIPLIFLAQTRPARVGLKLARNLAGEIPVLTQLVLGLLQAPGQVILSLDADAYTRNLYGPEGPTFDEAFLDSRGGDDGI---EDVETSDDCGGEFD 313
            G      R L  +L+VNW  + + A+       FG   A  RA  L+  PL FL QTRP +V +K     AGE P    ++L LL AP Q I+S D      +LYG +    +E F   R   +G    E+V+T DD   E+D
Sbjct:  277 GAAMNVKRALQRNLNVNWADTTRNALLFLFFGYFGGRSAFSRAFLLLSAPLCFLIQTRPVKVAMKQLFYTAGEPP---GILLSLLPAPQQAIMSCDYAGIMVDLYGEDALEGEEWFEMDRAAREGRAVGEEVDTDDDDVEEYD 416          
BLAST of mRNA_F-serratus_M_contig11.906.1 vs. uniprot
Match: B8LDG8_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LDG8_THAPS)

HSP 1 Score: 61.2 bits (147), Expect = 1.170e-6
Identity = 36/99 (36.36%), Postives = 50/99 (50.51%), Query Frame = 0
Query:  181 RPLAHSLDVNWLQSAQYAIFVYICAQFGAHGAVRRALTLMLIPLIFLAQTRPARVGLKLARNLAGEIPVLTQLVLGLLQAPGQVILSLDADAYTRNLYG 279
            R L  +++VNW  + + ++       FG   +  R   L+  PL FL QTRP +V LK      GE P    ++L LL AP Q I+SLD     + LYG
Sbjct:  379 RALQRNMNVNWADTTRNSLLFLFFGYFGGRNSFSRTFLLLSSPLCFLIQTRPVKVALKQVFYTMGEPP---GILLSLLPAPQQAIMSLDYGGVMKGLYG 474          
BLAST of mRNA_F-serratus_M_contig11.906.1 vs. uniprot
Match: A0A7S0C9Q3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C9Q3_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 1.640e-5
Identity = 34/101 (33.66%), Postives = 50/101 (49.50%), Query Frame = 0
Query:  181 RPLAHSLDVNWLQSAQYAIFVYICAQFGAHGAVRRALTLMLIPLIFLAQTRPARVGLKLARNLAGEIPVLTQLVLGLLQAPGQVILSLDADAYTRNLYGPE 281
            R L  +L++NW  + +         QFG    + R L L+  PL F+ Q RP ++ +K      G  P    ++L LL AP Q I+SLD     R++YG E
Sbjct:  154 RSLQKNLNINWPTTIRNFFLFIFFGQFGGRDKISRTLMLLGAPLCFVVQARPVKIFIKQLFYAVGTPP---GILLSLLPAPEQAIMSLDVKKAMRDIYGVE 251          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig11.906.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G1F1_ECTSI9.220e-14373.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
K0RKX3_THAOC7.070e-935.66Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
B8LDG8_THAPS1.170e-636.36Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A7S0C9Q3_9STRA1.640e-533.66Hypothetical protein (Fragment) n=2 Tax=Proboscia ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 2..83
e-value: 6.1E-6
score: 27.9
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 20..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig11contigF-serratus_M_contig11:233580..261364 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig11.906.1mRNA_F-serratus_M_contig11.906.1Fucus serratus malemRNAF-serratus_M_contig11 233525..262046 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig11.906.1 ID=prot_F-serratus_M_contig11.906.1|Name=mRNA_F-serratus_M_contig11.906.1|organism=Fucus serratus male|type=polypeptide|length=318bp
MRVQVSTTKMSSYIDARGEVTAQSDWTVGRLKEEVEKKFPGKIPASLQRL
FKGTQLLPSSVTLEELSEGGEGPLVLLLDNAPPIDSSRFDPDTAVPSRRD
GQVEAFSACLAAQATLEQSLLGTMRGASDEADSELTRSLRMKADFENTKA
LLQRTLEERPDTSVGQQPPQQAFGVLHEALRPLAHSLDVNWLQSAQYAIF
VYICAQFGAHGAVRRALTLMLIPLIFLAQTRPARVGLKLARNLAGEIPVL
TQLVLGLLQAPGQVILSLDADAYTRNLYGPEGPTFDEAFLDSRGGDDGIE
DVETSDDCGGEFDDDVD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-like_domsf