mRNA_F-serratus_M_contig11.910.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig11.910.1
Unique NamemRNA_F-serratus_M_contig11.910.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig11.910.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig11contigF-serratus_M_contig11:487384..488536 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size1080
Cds size1077
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928959.5470462-CDS-F-serratus_M_contig11:487383..4882031622928959.5470462-CDS-F-serratus_M_contig11:487383..488203Fucus serratus maleCDSF-serratus_M_contig11 487384..488203 +
1690962646.666276-CDS-F-serratus_M_contig11:487383..4882031690962646.666276-CDS-F-serratus_M_contig11:487383..488203Fucus serratus maleCDSF-serratus_M_contig11 487384..488203 +
1622928959.5617027-CDS-F-serratus_M_contig11:488278..4885351622928959.5617027-CDS-F-serratus_M_contig11:488278..488535Fucus serratus maleCDSF-serratus_M_contig11 488279..488535 +
1690962646.675413-CDS-F-serratus_M_contig11:488278..4885351690962646.675413-CDS-F-serratus_M_contig11:488278..488535Fucus serratus maleCDSF-serratus_M_contig11 488279..488535 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig11.910.1prot_F-serratus_M_contig11.910.1Fucus serratus malepolypeptideF-serratus_M_contig11 487384..488535 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig11.910.1

>prot_F-serratus_M_contig11.910.1 ID=prot_F-serratus_M_contig11.910.1|Name=mRNA_F-serratus_M_contig11.910.1|organism=Fucus serratus male|type=polypeptide|length=359bp
GREFESFRGNERERGPERRRGHGEDEREPEQREERGVRARAVAEIGRANR
SPERGGGREVRVGRSSEGWEEGRKTREPAARRDSRENKDGEFAAGEEAAR
TGVDENDRWRADSDGDEEVERRRREAMGGASASGRKRKQSREDPVLPEEE
RIADARIDRGGGGSGSNSGEKRKRDAGRARDGGRANGSSPVAGVKKARNL
EAGGRGHGRDRDRDIEKDAGSRMDHNVDDGDGDDRAEARSKSRSSGGRDH
QSGKNDDGGRGGDKEKEDRLARGILVIILVCVVIIILICVIVIIIFCIVI
CVIIVFFLVRVRVRVLEPLFVFKFRVGFGVGVASALQEASFSQEVIALRA
RIDELYPPS
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mRNA from alignment at F-serratus_M_contig11:487384..488536+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig11.910.1 ID=mRNA_F-serratus_M_contig11.910.1|Name=mRNA_F-serratus_M_contig11.910.1|organism=Fucus serratus male|type=mRNA|length=1153bp|location=Sequence derived from alignment at F-serratus_M_contig11:487384..488536+ (Fucus serratus male)
GGAAGGGAGTTCGAAAGCTTTCGGGGAAACGAGCGGGAGCGGGGTCCAGA
GCGCAGGCGCGGGCACGGGGAAGACGAGAGGGAGCCTGAACAGCGTGAAG
AACGTGGCGTTCGCGCAAGGGCAGTCGCCGAGATTGGGCGGGCGAACCGT
TCTCCGGAACGTGGGGGTGGGCGTGAGGTACGTGTTGGTCGCTCGTCGGA
GGGTTGGGAGGAAGGACGTAAAACGCGTGAACCCGCGGCGCGGCGCGATT
CTCGCGAAAATAAGGATGGTGAGTTCGCCGCGGGAGAGGAAGCGGCGCGG
ACGGGAGTGGACGAGAACGACAGGTGGCGGGCCGACAGCGACGGTGACGA
GGAAGTCGAGAGGCGACGTCGCGAGGCGATGGGTGGCGCTTCAGCTTCTG
GGAGAAAGCGCAAGCAGTCGCGGGAGGACCCCGTACTGCCTGAAGAGGAG
AGGATAGCTGATGCGCGGATCGACCGGGGTGGTGGCGGTAGTGGAAGCAA
CAGTGGGGAAAAGCGCAAGCGGGACGCTGGCCGTGCCCGAGACGGCGGGC
GGGCGAACGGCAGCAGCCCCGTCGCTGGCGTGAAGAAGGCCAGGAATTTG
GAGGCGGGAGGTCGTGGCCATGGCCGTGACCGCGATCGGGACATTGAGAA
AGATGCGGGAAGCAGAATGGATCACAATGTGGATGATGGTGATGGAGACG
ACCGGGCGGAAGCGCGCTCCAAGTCGCGTTCCAGCGGCGGTCGCGATCAT
CAGTCTGGAAAAAACGACGATGGTGGACGAGGTGGCGACAAGGAGAAGGA
GGACAGGCTCGCGCGGGGAAGGGACCGACGCCGCAGATCTCTCAGCCGGG
AGTCGTCGTCGTCTTCCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC
GTCATCATCCTCGTCTGCGTCGTCATCATCATCCTCATCTGCGTCATCGT
CATCATCATCTTCTGCATCGTCATCTGCGTCATCATCGTCTTCTTCCTCG
TCCGCGTCCGCGTCCGCGTCCTCGAGCCGCTCTTCGTCTTCAAGTTCAGG
GTCGGATTCGGAGTCGGAGTCGCCTCCGCGCTCCAGGAAGCGTCCTTCTC
GCAGGAGGTGATCGCCCTCAGAGCTCGTATCGATGAACTATACCCCCCAT
CCC
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Coding sequence (CDS) from alignment at F-serratus_M_contig11:487384..488536+

>mRNA_F-serratus_M_contig11.910.1 ID=mRNA_F-serratus_M_contig11.910.1|Name=mRNA_F-serratus_M_contig11.910.1|organism=Fucus serratus male|type=CDS|length=2154bp|location=Sequence derived from alignment at F-serratus_M_contig11:487384..488536+ (Fucus serratus male)
GGAAGGGAGTTCGAAAGCTTTCGGGGAAACGAGCGGGAGCGGGGTCCAGA
GCGCAGGCGCGGGCACGGGGAAGACGAGAGGGAGCCTGAACAGCGTGAAG
AACGTGGCGTTCGCGCAAGGGCAGTCGCCGAGATTGGGCGGGCGAACCGT
TCTCCGGAACGTGGGGGTGGGCGTGAGGTACGTGTTGGTCGCTCGTCGGA
GGGTTGGGAGGAAGGACGTAAAACGCGTGAACCCGCGGCGCGGCGCGATT
CTCGCGAAAATAAGGATGGTGAGTTCGCCGCGGGAGAGGAAGCGGCGCGG
ACGGGAGTGGACGAGAACGACAGGTGGCGGGCCGACAGCGACGGTGACGA
GGAAGTCGAGAGGCGACGTCGCGAGGCGATGGGTGGCGCTTCAGCTTCTG
GGAGAAAGCGCAAGCAGTCGCGGGAGGACCCCGTACTGCCTGAAGAGGAG
AGGATAGCTGATGCGCGGATCGACCGGGGTGGTGGCGGTAGTGGAAGCAA
CAGTGGGGAAAAGCGCAAGCGGGACGCTGGCCGTGCCCGAGACGGCGGGC
GGGCGAACGGCAGCAGCCCCGTCGCTGGCGTGAAGAAGGCCAGGAATTTG
GAGGCGGGAGGTCGTGGCCATGGCCGTGACCGCGATCGGGACATTGAGAA
AGATGCGGGAAGCAGAATGGATCACAATGTGGATGATGGTGATGGAGACG
ACCGGGCGGAAGCGCGCTCCAAGTCGCGTTCCAGCGGCGGTCGCGATCAT
CAGTCTGGAAAAAACGACGATGGTGGACGAGGTGGCGACAAGGAGAAGGA
GGACAGGCTCGCGCGGGGAAGGAAGGGAGTTCGAAAGCTTTCGGGGAAAC
GAGCGGGAGCGGGGTCCAGAGCGCAGGCGCGGGCACGGGGAAGACGAGAG
GGAGCCTGAACAGCGTGAAGAACGTGGCGTTCGCGCAAGGGCAGTCGCCG
AGATTGGGCGGGCGAACCGTTCTCCGGAACGTGGGGGTGGGCGTGAGGTA
CGTGTTGGTCGCTCGTCGGAGGGTTGGGAGGAAGGACGTAAAACGCGTGA
ACCCGCGGCGCGGCGCGATTCTCGCGAAAATAAGGATGGTGAGTTCGCCG
CGGGAGAGGAAGCGGCGCGGACGGGAGTGGACGAGAACGACAGGTGGCGG
GCCGACAGCGACGGTGACGAGGAAGTCGAGAGGCGACGTCGCGAGGCGAT
GGGTGGCGCTTCAGCTTCTGGGAGAAAGCGCAAGCAGTCGCGGGAGGACC
CCGTACTGCCTGAAGAGGAGAGGATAGCTGATGCGCGGATCGACCGGGGT
GGTGGCGGTAGTGGAAGCAACAGTGGGGAAAAGCGCAAGCGGGACGCTGG
CCGTGCCCGAGACGGCGGGCGGGCGAACGGCAGCAGCCCCGTCGCTGGCG
TGAAGAAGGCCAGGAATTTGGAGGCGGGAGGTCGTGGCCATGGCCGTGAC
CGCGATCGGGACATTGAGAAAGATGCGGGAAGCAGAATGGATCACAATGT
GGATGATGGTGATGGAGACGACCGGGCGGAAGCGCGCTCCAAGTCGCGTT
CCAGCGGCGGTCGCGATCATCAGTCTGGAAAAAACGACGATGGTGGACGA
GGTGGCGACAAGGAGAAGGAGGACAGGCTCGCGCGGGGAATCCTCGTCAT
CATCCTCGTCTGCGTCGTCATCATCATCCTCATCTGCGTCATCGTCATCA
TCATCTTCTGCATCGTCATCTGCGTCATCATCGTCTTCTTCCTCGTCCGC
GTCCGCGTCCGCGTCCTCGAGCCGCTCTTCGTCTTCAAGTTCAGGGTCGG
ATTCGGAGTCGGAGTCGCCTCCGCGCTCCAGGAAGCGTCCTTCTCGCAGG
AGGTGATCGCCCTCAGAGCTCGTATCGATGAACTATACCCCCCATCCTCC
TCGTCATCATCCTCGTCTGCGTCGTCATCATCATCCTCATCTGCGTCATC
GTCATCATCATCTTCTGCATCGTCATCTGCGTCATCATCGTCTTCTTCCT
CGTCCGCGTCCGCGTCCGCGTCCTCGAGCCGCTCTTCGTCTTCAAGTTCA
GGGTCGGATTCGGAGTCGGAGTCGCCTCCGCGCTCCAGGAAGCGTCCTTC
TCGCAGGAGGTGATCGCCCTCAGAGCTCGTATCGATGAACTATACCCCCC
ATCC
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