mRNA_F-serratus_M_contig1095.873.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1095.873.1 vs. uniprot
Match: A0A6H5L3M0_9PHAE (PKD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3M0_9PHAE) HSP 1 Score: 262 bits (670), Expect = 4.700e-79 Identity = 110/204 (53.92%), Postives = 146/204 (71.57%), Query Frame = 2 Query: 350 GQWGDEEEDFIDKMGYNIDAVQLTKYAWRKGYLRLPEHCAAHED-------CTASCPEEIYKSRNMSVYDVLIDLNAPQWLAPGSGGMLYYDSENDVFEIAGHEDDEPFKAAFWRKMLESFCKPGQTGEMYTSAAPYDPLFWVVHPSADRFLAWRRMLARRDPDTWALDETWGYKNNWVIGKSGMVCDWTGVDENGLDMPNCVQ 940 G+W D EED K+GY LTK+ WRKGYLR PE C A ED C A CP E+Y++ M+ YDVL+D+ + W+A SGG++ YD +D F +AGHE+DE F++ W+ +L S C PG GE+YTS+APYDPLFWV+HP+A+RFL+WRR LA PD WALDETWGY + V+G++G+VCDW+GV ++ LDMP+CV+ Sbjct: 399 GEWNDPEEDMATKLGYTSAIPLLTKFLWRKGYLRTPESCTAEEDGVGDSSTCRAGCPAEVYENLGMTPYDVLMDIFSLHWIARLSGGIIVYDEAHDRFVVAGHEEDEAFQSVIWKTVLHSLCDPGHVGELYTSSAPYDPLFWVIHPTAERFLSWRRKLATERPDVWALDETWGYSHGHVVGETGVVCDWSGVGDDFLDMPSCVR 602
BLAST of mRNA_F-serratus_M_contig1095.873.1 vs. uniprot
Match: D7G0J8_ECTSI (Putative scytonemin-related tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J8_ECTSI) HSP 1 Score: 246 bits (628), Expect = 1.610e-72 Identity = 106/197 (53.81%), Postives = 139/197 (70.56%), Query Frame = 2 Query: 350 GQWGDEEEDFIDKMGYNIDAVQLTKYAWRKGYLRLPEHCAAHEDCTASCPEEIYKSRNMSVYDVLIDLNAPQWLAPGSGGMLYYDSENDVFEIAGHEDDEPFKAAFWRKMLESFCKPGQTGEMYTSAAPYDPLFWVVHPSADRFLAWRRMLARRDPDTWALDETWGYKNNWVIGKSGMVCDWTGVDENGLDMPNCVQ 940 G+W EEDFI K+GY +TK+ WRKGYL +P+ C C SCP ++Y+S+ M+ YDVL+D++A W A S ++Y +S+ D FE+ GHEDDE F+ AF++KML SFC PG GEMYTSAAPYDPLFWV+HP+ADR LAWRRML R+ + W DETWGY ++ V+G++G VC+W V DMP CV+ Sbjct: 403 GEWHAAEEDFIQKVGYYESVPLVTKFLWRKGYLSIPDTCDQGTPCQTSCPAKLYESKGMTPYDVLLDVHALMWTAHTSASLVY-NSKKDKFEVKGHEDDESFQQAFFKKMLNSFCNPGNVGEMYTSAAPYDPLFWVIHPTADRLLAWRRMLGRQGAEGWDFDETWGYAHSSVVGETGTVCNWDDVVPGSGDMPTCVK 598
BLAST of mRNA_F-serratus_M_contig1095.873.1 vs. uniprot
Match: A0A6H5LKB4_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LKB4_9PHAE) HSP 1 Score: 244 bits (623), Expect = 3.240e-72 Identity = 104/196 (53.06%), Postives = 136/196 (69.39%), Query Frame = 2 Query: 350 GQWGDEEEDFIDKMGYNIDAVQLTKYAWRKGYLRLPEHCAAHEDCTASCPEEIYKSRNMSVYDVLIDLNAPQWLAPGSGGMLYYDSENDVFEIAGHEDDEPFKAAFWRKMLESFCKPGQTGEMYTSAAPYDPLFWVVHPSADRFLAWRRMLARRDPDTWALDETWGYKNNWVIGKSGMVCDWTGVDENGLDMPNCV 937 G+W EEDFI K+GY +TK+ WRKGYL +P+ C E C SCP E+Y+S+ M+ YDVL+D++A W + + L Y S D FE+ G+EDDEPF+ A+++KML SFC PG GEM+TSAAPYDP+FWVVHP+ADR LAWRRML R+ + W DETWGY + V+G++G VC+W V DMP C+ Sbjct: 403 GEWHAAEEDFIQKVGYYESVPLVTKFLWRKGYLSIPDKCEVGESCQTSCPSELYESKGMTPYDVLMDVHALMWTSH-TASSLVYSSRKDKFEVKGYEDDEPFQRAYFKKMLNSFCNPGAVGEMFTSAAPYDPVFWVVHPTADRLLAWRRMLGRQGVEGWDFDETWGYTHTSVVGETGTVCNWDDVVPGSGDMPTCI 597
BLAST of mRNA_F-serratus_M_contig1095.873.1 vs. uniprot
Match: D7G0J9_ECTSI (PKD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J9_ECTSI) HSP 1 Score: 241 bits (614), Expect = 8.840e-71 Identity = 101/202 (50.00%), Postives = 132/202 (65.35%), Query Frame = 2 Query: 350 GQWGDEEEDFIDKMGYNIDAVQLTKYAWRKGYLRLPEHCAAHED-------CTASCPEEIYKSRNMSVYDVLIDLNAPQWLAPGSGGMLYYDSENDVFEIAGHEDDEPFKAAFWRKMLESFCKPGQTGEMYTSAAPYDPLFWVVHPSADRFLAWRRMLARRDPDTWALDETWGYKNNWVIGKSGMVCDWTGVDENGLDMPNC 934 G+W + EE+ + +GY + + K+ WRKGYLR+P C E C ASCP EIY++ M+ YDVL D + W+A SGG++ +D E + F IAGHEDD F+ FW ++L S C PG GE+YTS+APYDPLFWV+HP+A+RF+ WRR L PD W LDETW Y + WV+G++G VCDW V E LDMP C Sbjct: 404 GEWNNPEEELTNSLGYADEVPLMAKFLWRKGYLRMPTSCTEDEHGTGDDSTCRASCPSEIYENLGMTPYDVLYDALSIHWVAGKSGGVVVWDEEKEKFYIAGHEDDVEFEKFFWLRILNSLCDPGHVGELYTSSAPYDPLFWVIHPTAERFMGWRRKLGVEQPDMWPLDETWDYSHGWVVGETGTVCDWDDVREGSLDMPTC 605
BLAST of mRNA_F-serratus_M_contig1095.873.1 vs. uniprot
Match: D7FSP4_ECTSI (PKD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSP4_ECTSI) HSP 1 Score: 228 bits (581), Expect = 8.130e-66 Identity = 96/209 (45.93%), Postives = 134/209 (64.11%), Query Frame = 2 Query: 350 GQWGDEEEDFIDKMG-----YNIDAVQLTKYAWRKGYLRLPEHCAAHED-------CTASCPEEIYKSRNMSVYDVLIDLNAPQWLAPGSGGMLYYDSENDVFEIAGHEDDEPFKAAFWRKMLESFCKPGQTGEMYTSAAPYDPLFWVVHPSADRFLAWRRMLARRDPDTWALDETWGYKNNWVIGKSGMVCDWTGVDENGLDMPNCVQ 940 G+W D +E I +G Y ++KY WRKGYLR+P C+ + C +SCP E+Y+S+ M YDVL+D+ A W+A +GG++ +D+ + F +AGHE D F W K+L S C PG GE+Y+S+APYDPLFWV+HP+A+RF+ W+R LAR PD E WGY + V+G++GMVCDW+GV + LDMP CV+ Sbjct: 417 GEWNDPQEGIIQALGTLFGRYTNKVPLMSKYLWRKGYLRMPTSCSVESEGTGDASTCRSSCPAELYESKGMKPYDVLMDVYALHWIAESAGGIVVWDNNTEHFTVAGHEHDAEFMEGLWTKVLTSLCDPGHVGELYSSSAPYDPLFWVIHPTAERFMGWKRKLARERPDVHPFSEDWGYTHGNVVGETGMVCDWSGVRQGTLDMPTCVK 625
BLAST of mRNA_F-serratus_M_contig1095.873.1 vs. uniprot
Match: A0A6H5KFJ6_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ6_9PHAE) HSP 1 Score: 185 bits (469), Expect = 6.450e-51 Identity = 78/164 (47.56%), Postives = 107/164 (65.24%), Query Frame = 2 Query: 350 GQWGDEEEDFIDKMGYNIDAVQLTKYAWRKGYLRLPEHCAAHED-------CTASCPEEIYKSRNMSVYDVLIDLNAPQWLAPGSGGMLYYDSENDVFEIAGHEDDEPFKAAFWRKMLESFCKPGQTGEMYTSAAPYDPLFWVVHPSADRFLAWRRMLARRDPD 820 G+W + EE+ + +GY + + K+ WRKGYLR+P C E C ASCP EIY++ M+ YDVL D + W+A SGG++ +D E + F +AGHEDD F+ FW ++L S C PG GE+YTS+APYDPLFWV+HP+A+RF+ WRR L+ PD Sbjct: 350 GEWNNPEEELTNSLGYADEVPLMAKFLWRKGYLRIPTSCTVEEHGTGDDSTCRASCPSEIYENLGMTPYDVLYDALSIHWVAGKSGGVVVWDEEKEKFYVAGHEDDLEFEKFFWLRILNSLCDPGHVGELYTSSAPYDPLFWVIHPTAERFMGWRRKLSVEQPD 513
BLAST of mRNA_F-serratus_M_contig1095.873.1 vs. uniprot
Match: A0A7S2V1V1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1V1_9STRA) HSP 1 Score: 158 bits (400), Expect = 3.200e-40 Identity = 74/200 (37.00%), Postives = 118/200 (59.00%), Query Frame = 2 Query: 350 GQWGDEEEDFIDKMGYNIDAVQLTKYAWRKGYLRLPEHCAAHE--DCTASCPEEIYKSRNMSVYDVLIDLNAPQWLAPGSGGMLYYDSENDVFEIAGHEDDEPFKAAFWRKMLESFCKPGQTGEMYTSAAPYDPLFWVVHPSADRFLAWRRMLARRDPDTWALDETWGYKNN-WVIGKSGMVCDWTGVDENGLDMPNCVQ 940 G WG + ++ G+ ++ + + K WR GY R+PE C+ CT SCP E+Y+SR M+ DVL+ + +++ + YY E + + I G E + + W K+L + C PG GEMY+S +PYDPLFW++HP+ +RF +RR+L ++ L+E WGY + ++ +G +CDW+GV E+ LD+P C Q Sbjct: 394 GMWGSGDPKTANQYGFAVNQLLIFKNLWRMGYARVPESCSTDHPSSCTVSCPAELYQSRGMTARDVLVKTDVLRFMR-----VPYYGKEGN-YHIVGFEGNPEGERKEWEKILNAICNPGNVGEMYSSTSPYDPLFWLIHPTGERFQNYRRLLKYKNIKD--LEEPWGYTHETFIASDNGWMCDWSGV-EDFLDLPECSQ 584
BLAST of mRNA_F-serratus_M_contig1095.873.1 vs. uniprot
Match: D7G0K0_ECTSI (Tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0K0_ECTSI) HSP 1 Score: 155 bits (391), Expect = 6.340e-40 Identity = 72/204 (35.29%), Postives = 105/204 (51.47%), Query Frame = 2 Query: 350 GQWGDEEEDFIDKMGYNIDAVQLTKYAWRKGYLRLPEHCAAHED-------CTASCPEEIYKSRNMSVYDVLIDLNAPQWLAPGSGGMLYYDSENDVFEIAGHEDDEPFKAAFWRKMLESFCKPGQTGEMYTSAAPYDPLFWVVHPSADRFLAWRRMLARRDPDTWALDETWGYKNNWVIGKSGMVCDWTGVDENGLDMPNCVQ 940 G+W + EE+F ++GY+ L K WR+GYLR+P C +D C SCP E+Y+S M+ YDVL+D +A W+A +G + YD + D F + GHEDDE F+ FW ++L S C PG W+LD+TWGY + + G++ +VCDW+GV ++ L MP CV+ Sbjct: 257 GEWNNPEEEFTFRLGYSASVAILAKALWRQGYLRVPNTCLQGKDGPGNASTCITSCPAELYESLGMTPYDVLVDTSAAYWVAEAAGDAVMYDHDEDRFVVTGHEDDEDFQNEFWMRVLHSLCDPG----------------------------------------WSLDDTWGYLDGNMFGETRVVCDWSGVRDDPLAMPTCVE 420
BLAST of mRNA_F-serratus_M_contig1095.873.1 vs. uniprot
Match: A0A7S2AXN9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AXN9_9STRA) HSP 1 Score: 144 bits (363), Expect = 3.470e-36 Identity = 74/189 (39.15%), Postives = 101/189 (53.44%), Query Frame = 2 Query: 365 EEEDFIDKMGYNIDAVQLTKYAWRKGYLRLPEHCAAH---EDCTASCPEEIYKSRNMSVYDVLID-LNAPQWLAPGSGGMLYYDSENDVFEIAGHEDDEPFKAAFWRKMLESFCKPGQTGEMYTSAAPYDPLFWVVHPSADRFLAWRRMLARRDPDTWALDETWGYKNNWVIGKSGMVCDWTGVDENGL 919 E + + + G D + L K WRKGYLR PE C+ E C SCP E Y+ + Y++L+D W+ S G +YY+ D + I E + W ++L C PG GEMYTSAAPYDP FW++HPSA+R L+WRRML T ++TWGY + G +C+W V + GL Sbjct: 166 ENDHMVFQGGLAGDQLLLAKILWRKGYLRCPETCSKDTPAEKCLCSCPME-YR-HGATPYEILVDKAEVMHWVVETSRGGIYYNKTEDHYHIMNKTLAE--EEVLWNEILLVLCNPGHPGEMYTSAAPYDPTFWLIHPSAERMLSWRRMLDHLSVHT--FNQTWGYSHQGDPSDMGQICEWDDVSDFGL 348
BLAST of mRNA_F-serratus_M_contig1095.873.1 vs. uniprot
Match: A0A6V1TYR0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TYR0_HETAK) HSP 1 Score: 144 bits (364), Expect = 3.080e-35 Identity = 76/203 (37.44%), Postives = 114/203 (56.16%), Query Frame = 2 Query: 350 GQWG--DEEEDFIDKMG-YNIDAVQLTKYAWRKGYLRLPEHCAAHEDCTASCPEEIYKSRNMSVYDVLIDLNAPQWLAPGSGGMLYYDSENDVFEIAGHEDDEPFKAAFWRKMLESFCKPGQTGEMYTSAAPYDPLFWVVHPSADRFLAWRRMLARRDPDTWALDETWGYK---NNWVIGKSGMVCDWTGVDENGLDMPNCVQ 940 G+W DE F+D G + V + K WR G+ R P CA E C P E+ + ++ Y+ + ++ ++L+ + G Y S++ + I G ED + A W K+L++ PG GEMYTS+AP DP FW++HP+A+R L+ RR++ DT +LDETWGY NN +G VCDW+ V+ G +P+CVQ Sbjct: 393 GEWNVNDEMLSFMDAYGGFEYKLVLVFKILWRTGFARCPTTCAEGETCECYAPVEVLEEAGLTAYEAMKQIDVLKYLS--TDGDYVYTSDDGEYHIYGLEDSPEEEEAVWLKILQALANPGWVGEMYTSSAPTDPTFWILHPTAERLLSARRLVK----DTMSLDETWGYTHQDNN--PSDNGWVCDWSNVE--GWGLPDCVQ 585 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1095.873.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1095.873.1 >prot_F-serratus_M_contig1095.873.1 ID=prot_F-serratus_M_contig1095.873.1|Name=mRNA_F-serratus_M_contig1095.873.1|organism=Fucus serratus male|type=polypeptide|length=184bp MGYNIDAVQLTKYAWRKGYLRLPEHCAAHEDCTASCPEEIYKSRNMSVYDback to top mRNA from alignment at F-serratus_M_contig1095:270546..277467- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1095.873.1 ID=mRNA_F-serratus_M_contig1095.873.1|Name=mRNA_F-serratus_M_contig1095.873.1|organism=Fucus serratus male|type=mRNA|length=6922bp|location=Sequence derived from alignment at F-serratus_M_contig1095:270546..277467- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1095:270546..277467- >mRNA_F-serratus_M_contig1095.873.1 ID=mRNA_F-serratus_M_contig1095.873.1|Name=mRNA_F-serratus_M_contig1095.873.1|organism=Fucus serratus male|type=CDS|length=1104bp|location=Sequence derived from alignment at F-serratus_M_contig1095:270546..277467- (Fucus serratus male)back to top |