mRNA_F-serratus_M_contig108.760.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig108.760.1 vs. uniprot
Match: D8LTT7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTT7_ECTSI) HSP 1 Score: 182 bits (462), Expect = 1.590e-50 Identity = 90/144 (62.50%), Postives = 114/144 (79.17%), Query Frame = 1 Query: 10 VVWQILTQFSDLADVPYPSSYKRFLGMLDVFNFDISWPLSTMCVIGGINFYEKLIIVTLGPIITLGALGLSYVGAMQWHSG----ADRNAIECRQQAKVRHASTALLVLFLVFSSVSTTVFSTFACNYMEDYGVSMLRADYSIS 429 VVWQILTQFS LA++PYP SY+RFL +LDVFNFDI+WPL+ C++ I FY++L+ VTLGP++ L L L+YV A+ H + R + E RQ+A VRHAS ALL+LFLVFSSVST VFST++C+Y+ED GVS+LRADYSIS Sbjct: 1214 VVWQILTQFSHLAEIPYPPSYQRFLNILDVFNFDITWPLTAACIVDNITFYQRLVGVTLGPLVLLAFLSLTYVIALYVHRRRNYFSSRASAEARQRAVVRHASAALLILFLVFSSVSTAVFSTYSCDYLEDLGVSLLRADYSIS 1357
BLAST of mRNA_F-serratus_M_contig108.760.1 vs. uniprot
Match: A0A6H5JUJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUJ2_9PHAE) HSP 1 Score: 181 bits (458), Expect = 5.470e-50 Identity = 91/144 (63.19%), Postives = 112/144 (77.78%), Query Frame = 1 Query: 10 VVWQILTQFSDLADVPYPSSYKRFLGMLDVFNFDISWPLSTMCVIGGINFYEKLIIVTLGPIITLGALGLSYVGAMQWHSG----ADRNAIECRQQAKVRHASTALLVLFLVFSSVSTTVFSTFACNYMEDYGVSMLRADYSIS 429 VVWQILTQFS LA++PYP SY+RFL +LD+FNFDI+WPL+ C++ I FY +L+ VTLGP+ L L L+YV AM H + R + E RQ+A VRHAS ALL+LFLVFSSVSTTVFSTF+C+Y+ED VS+LRADYSIS Sbjct: 1220 VVWQILTQFSHLAEIPYPPSYQRFLNILDIFNFDITWPLTAACIVDNITFYHRLVWVTLGPLALLTFLSLTYVIAMHVHRRRNYFSSRASAEARQRAVVRHASAALLILFLVFSSVSTTVFSTFSCDYVEDLDVSLLRADYSIS 1363
BLAST of mRNA_F-serratus_M_contig108.760.1 vs. uniprot
Match: D7FRV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV1_ECTSI) HSP 1 Score: 127 bits (319), Expect = 2.760e-31 Identity = 70/139 (50.36%), Postives = 92/139 (66.19%), Query Frame = 1 Query: 10 VVWQILTQFSDLADVPYPSSYKRFLGMLDVFNFDISWPLSTMCVIGGINFYEKLIIVTLGPIITLGALGLSYVGAMQWHSGADRNAIECRQQAKVRHASTALLVLFLVFSSVSTTVFSTFACNYMEDYGVSMLRADYSI 426 VVWQILTQFSD+A+V YP Y+RFL ++DV NFDI W +S CV+ +F++ L+ T+GPII +G LG +Y A + G+D E + +H S LLV FLV+SSVS+TVF F C+ + D S LRADYSI Sbjct: 709 VVWQILTQFSDVANVTYPHIYQRFLDVIDVLNFDIGWVISAGCVVD-FDFHDHLLTATIGPIIVVGVLGATYAAASYRNRGSD----EAIARVFRKHVSAVLLVTFLVYSSVSSTVFRMFVCDPLADSN-SYLRADYSI 841
BLAST of mRNA_F-serratus_M_contig108.760.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE) HSP 1 Score: 121 bits (303), Expect = 4.090e-29 Identity = 61/140 (43.57%), Postives = 96/140 (68.57%), Query Frame = 1 Query: 10 VVWQILTQFSDLADVPYPSSYKRFLGMLDVFNFDISWPLSTMCVIGGINFYEKLIIVTLGPIITLGALGLSYVGAMQWHSGADRNAIECRQQAKVRHASTALLVLFLVFSSVSTTVFSTFACNYMEDYGVSMLRADYSIS 429 VVWQI+TQ+SD+A + YP +Y+ FL ++DV N D+ + LS CV NFY++L++ T+GP++ LG LG +YV A + +R+ E + + RH S L V+F+++++VS T+F TF C+ ++D G S LRADYS++ Sbjct: 706 VVWQIVTQYSDVAGIEYPGAYQDFLSVVDVVNLDLGFILSFACVYDT-NFYDRLLMATIGPVLVLGLLGCTYVVARR----RNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDD-GNSYLRADYSLT 839
BLAST of mRNA_F-serratus_M_contig108.760.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI) HSP 1 Score: 120 bits (301), Expect = 7.620e-29 Identity = 61/140 (43.57%), Postives = 96/140 (68.57%), Query Frame = 1 Query: 10 VVWQILTQFSDLADVPYPSSYKRFLGMLDVFNFDISWPLSTMCVIGGINFYEKLIIVTLGPIITLGALGLSYVGAMQWHSGADRNAIECRQQAKVRHASTALLVLFLVFSSVSTTVFSTFACNYMEDYGVSMLRADYSIS 429 VVWQI+TQ+SD+A V YP +Y+ FL ++DV N D+ + LS CV NFY++L++ T+GP++ LG LG +Y+ A + +R+ E + + RH S L V+F+++++VS T+F TF C+ ++D G S LRADYS++ Sbjct: 725 VVWQIVTQYSDVAGVEYPGAYQDFLSVVDVVNLDLGFILSFACVYDT-NFYDRLLMATIGPVLVLGLLGCTYLVARR----RNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDD-GNSYLRADYSLT 858
BLAST of mRNA_F-serratus_M_contig108.760.1 vs. uniprot
Match: D7FPF7_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF7_ECTSI) HSP 1 Score: 115 bits (289), Expect = 8.300e-28 Identity = 61/139 (43.88%), Postives = 91/139 (65.47%), Query Frame = 1 Query: 10 VVWQILTQFSDLADVPYPSSYKRFLGMLDVFNFDISWPLSTMCVIGGINFYEKLIIVTLGPIITLGALGLSYVGAMQWHSGADRNAIECRQQAKVRHASTALLVLFLVFSSVSTTVFSTFACNYMEDYGVSMLRADYSI 426 V WQI+TQFS + +V YP Y++FL +L++ NF+ + LS CV+ NFY +L+ T+GP++ LGAL L+Y + +R++ Q AK +H S AL ++F+V+SSVS +F TF C ++D GV LRADYS+ Sbjct: 69 VAWQIVTQFSSVVNVVYPDVYEKFLSILNLVNFNFGFILSASCVVDT-NFYGRLLFATIGPLVVLGALALTYAVSRS----RNRHSPAGIQTAKHKHLSIALFIMFVVYSSVSFNIFQTFVCETLDD-GVEYLRADYSL 201
BLAST of mRNA_F-serratus_M_contig108.760.1 vs. uniprot
Match: D7G1E0_ECTSI (EsV-1-12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1E0_ECTSI) HSP 1 Score: 117 bits (293), Expect = 8.910e-28 Identity = 62/140 (44.29%), Postives = 93/140 (66.43%), Query Frame = 1 Query: 10 VVWQILTQFSDLADVPYPSSYKRFLGMLDVFNFDISWPLSTMCVIGGINFYEKLIIVTLGPIITLGALGLSYVGAMQWHSGA-DRNAIECRQQAKVRHASTALLVLFLVFSSVSTTVFSTFACNYMEDYGVSMLRADYSI 426 VVWQILTQF+D A+V YP Y+ FL +DV NFDI L+ C+ ++F+++L++ T+GP++ +G L ++Y ++ HS + D +E + +H + LL+ FLV+SSVS+TVF TFAC ++D V LRADY I Sbjct: 981 VVWQILTQFADAANVTYPGVYQDFLSAIDVINFDIGSVLAAGCLWSDMDFHDRLLVTTIGPLVVVGFLAMTYGIVLRRHSASGDTGGVE---KIYHKHQTALLLLTFLVYSSVSSTVFQTFACEILDD-DVEYLRADYRI 1116
BLAST of mRNA_F-serratus_M_contig108.760.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 116 bits (291), Expect = 1.650e-27 Identity = 65/139 (46.76%), Postives = 88/139 (63.31%), Query Frame = 1 Query: 10 VVWQILTQFSDLADVPYPSSYKRFLGMLDVFNFDISWPLSTMCVIGGINFYEKLIIVTLGPIITLGALGLSYVGAMQWHSGADRNAIECRQQAKVRHASTALLVLFLVFSSVSTTVFSTFACNYMEDYGVSMLRADYSI 426 V WQILTQF+ +A+V YP YKRFL LDVFNFD+SW LS C+ I+F+++L+ T+ P+I L L +Y A+ + G E Q +H S LL+ FL++SSVS T+F F C +ED G + LRADY+I Sbjct: 921 VAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFD-IDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGK----AESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELED-GTNYLRADYTI 1053
BLAST of mRNA_F-serratus_M_contig108.760.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI) HSP 1 Score: 116 bits (290), Expect = 2.280e-27 Identity = 62/139 (44.60%), Postives = 90/139 (64.75%), Query Frame = 1 Query: 10 VVWQILTQFSDLADVPYPSSYKRFLGMLDVFNFDISWPLSTMCVIGGINFYEKLIIVTLGPIITLGALGLSYVGAMQWHSGADRNAIECRQQAKVRHASTALLVLFLVFSSVSTTVFSTFACNYMEDYGVSMLRADYSI 426 V WQI+TQF+++A+V YP Y+ FL L+VFNFD+SW LS CV+ ++F+++L++ T+GPI L +Y A++ H GA E + + +H LL+ F V+SSVS T+F TFAC +ED G + L ADY I Sbjct: 1276 VAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVD-VDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGAT----ETLENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLED-GKTYLLADYRI 1408
BLAST of mRNA_F-serratus_M_contig108.760.1 vs. uniprot
Match: A0A6H5J7J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J9_9PHAE) HSP 1 Score: 115 bits (287), Expect = 5.630e-27 Identity = 61/141 (43.26%), Postives = 95/141 (67.38%), Query Frame = 1 Query: 10 VVWQILTQFSDLADVPYPSSYKRFLGMLDVFNFDISWPLSTMCVIGGINFYEKLIIVTLGPIITLGALGLSYVGAMQWH--SGADRNAIECRQQAKVRHASTALLVLFLVFSSVSTTVFSTFACNYMEDYGVSMLRADYSI 426 VVWQILTQF+D+A++ YP +Y+ FL +DV NFD+ L+ C+ I+F+++L++ TLGP++ +G L ++Y A++ + +G A R +H S LL+ FL++SSVS+TVF TFAC ++D G+ LR DY+I Sbjct: 721 VVWQILTQFADVANITYPQAYQDFLSAIDVVNFDLGSALAAGCLWPDIDFHDRLLLGTLGPLVAVGFLVMTYRVAVRRNGTAGGQTPADNTRH----KHLSALLLLTFLIYSSVSSTVFQTFACETLDD-GIEYLRVDYTI 856 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig108.760.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig108.760.1 >prot_F-serratus_M_contig108.760.1 ID=prot_F-serratus_M_contig108.760.1|Name=mRNA_F-serratus_M_contig108.760.1|organism=Fucus serratus male|type=polypeptide|length=143bp DTSVVWQILTQFSDLADVPYPSSYKRFLGMLDVFNFDISWPLSTMCVIGGback to top mRNA from alignment at F-serratus_M_contig108:487757..489659- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig108.760.1 ID=mRNA_F-serratus_M_contig108.760.1|Name=mRNA_F-serratus_M_contig108.760.1|organism=Fucus serratus male|type=mRNA|length=1903bp|location=Sequence derived from alignment at F-serratus_M_contig108:487757..489659- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig108:487757..489659- >mRNA_F-serratus_M_contig108.760.1 ID=mRNA_F-serratus_M_contig108.760.1|Name=mRNA_F-serratus_M_contig108.760.1|organism=Fucus serratus male|type=CDS|length=858bp|location=Sequence derived from alignment at F-serratus_M_contig108:487757..489659- (Fucus serratus male)back to top |