mRNA_F-serratus_M_contig108.756.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig108.756.1 vs. uniprot
Match: D8LTT7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTT7_ECTSI) HSP 1 Score: 489 bits (1258), Expect = 1.120e-140 Identity = 300/691 (43.42%), Postives = 392/691 (56.73%), Query Frame = 2 Query: 2 GYWRGDVNRTIVQSCLLTEACKGGRGI---------------------------------ISLNSTSTENYLEDDRYCETGYVGPYCAVCAKDFRRLLGNE-CLDCQGHWGTATRAVLWVAIALAPVLLISLMMYLLGGTRSFKQLRKKVCGRCCPPEPVGVTQWSLGGGGDITAGEGGEI--EKRTSWKRMAKRLGALVLRAIPFQQIKIIIVVWQILTQCSDFADIPYPPAYKRFLGVLDAFNFDISRLLSTLCLMKAVNFYEKLVIVTLAPIIVLGILGLSYTAAM----RWFQGSDRNAIESRQQAKARHASASLLVLFLVFSSVSTTIFSTFSCHAVEDLEVYLLRADYSLTCYDNLHVLYQVYAGVMILMYPIGIPLIFTFLLLKHRDKINPPTAA-EVARRGPRARTFPGRQGHVSNPGDLPDMDDSAWTTSLTSRSLYRGQNSMGPVVSRARVKVAPRDVTAGDXXXXXXXXXXXXXXXXNDGARTVDLEGVEK-------EEEKTTLGPAFATDAHC------------------------EEVLRQRAQDLDLQPTKFLWEPYEPRIFYYETVECGRRCLLTGALVFVVPNTAAQMAGACIFAFLSLLVFELIRPHLSQTDSWMYRIGGILIFFSNFLGLMVKADVSGEDAQSQKLFSVLLIGVHVIMFVAIFSQACLSIQ 1858 GYWRGD+ +T ++ C AC GG G+ +N+T+ ED RYC G+ G YCAVCA +RR G + C+ C G W T RA LWV L+PV++++L+++L+GG + QL+ K+ C T +TA GG R S + A +G +LRA+PFQ++KI++VVWQILTQ S A+IPYPP+Y+RFL +LD FNFDI+ L+ C++ + FY++LV VTL P+++L L L+Y A+ R S R + E+RQ+A RHASA+LL+LFLVFSSVST +FST+SC +EDL V LLRADYS++C H Y+ YA +MIL+YPIG+P++F LLLK R+KINPPT ++A A T P VS S T+R G G + R R +GD + A +V EG + E E+ L + EEVL RAQD DLQ T+FLWEPYEP +YYETVECGRRCLLTGALVFV+PNTA Q AGA +FAF+ LL FEL+RPHLS TD+WMYRIG I IFFSNFLGLM KADVS E+AQSQ+ + +LLI VHV+M +AI +QA +S+Q Sbjct: 1012 GYWRGDITQTYIRECWNPSACAGGTGVNASSXXXXXXXXXXXXXXXXXXXXXXXXXXXTTADVNATAASFEYEDARYCIEGHRGAYCAVCADGYRRFSGGQLCVSCAGVWSTGARATLWVLGMLSPVVVVALVVFLIGGLTAVSQLQGKLS--LCLLGRRSKT---------VTASSGGSTLAPSRASRRAAAGTVGLRLLRAVPFQKLKILVVVWQILTQFSHLAEIPYPPSYQRFLNILDVFNFDITWPLTAACIVDNITFYQRLVGVTLGPLVLLAFLSLTYVIALYVHRRRNYFSSRASAEARQRAVVRHASAALLILFLVFSSVSTAVFSTYSCDYLEDLGVSLLRADYSISCDHPDHTFYEAYAALMILLYPIGVPMLFAVLLLKRREKINPPTQTLDLA-----AATGPVLMERVS---------------SDTARMENEGSGHPGAAAATPRATPTARGRDSGDIELAGMKDTSRGARRGS--AVSVASEGDSQYHRRCSGEGERRPLSNGSSGXXXXXXXXXXXXXXXXXXXXXXGLVQDREEVLENRAQDPDLQSTRFLWEPYEPDNYYYETVECGRRCLLTGALVFVLPNTAGQAAGASVFAFVGLLGFELLRPHLSHTDAWMYRIGCITIFFSNFLGLMAKADVSDEEAQSQEAYGLLLIAVHVLMVLAILAQAYVSMQ 1669
BLAST of mRNA_F-serratus_M_contig108.756.1 vs. uniprot
Match: A0A6H5JCK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK8_9PHAE) HSP 1 Score: 320 bits (820), Expect = 6.770e-87 Identity = 236/728 (32.42%), Postives = 351/728 (48.21%), Query Frame = 2 Query: 2 GYWRGDVNRTIVQSCLLTEACKGGRGIISLNSTSTENYLEDDRYCETGYVGPYCAVCAKDFRRLLGNECLDCQGHWGTATRAVLWVAIALAPVLLISL---MMYLLGGTRSFKQLRKKVCGRCCPPE--PVGVTQWSLGGGGDITAG--------------EGGEIEKRTS-------------------------WKRMAKR------LGALVLR---AIPFQQIKIIIVVWQILTQCSDFADIPYPPAYKRFLGVLDAFNFDISRLLSTLCLMKAVNFYEKLVIVTLAPIIVLGILGLSYTAAMRWFQGSDRNAIESRQQAKARHASASLLVLFLVFSSVSTTIFSTFSC--HAVEDLEVYLLRADYSLTCYDNLHVLYQVYAGVMILMYPIGIPLIFTFLLLKHRDKINPPTAAEVARRGPRARTFPGRQGHVSNPGDLPDMDDSAWTTSLTSRSLYRGQNSMGPVVSRARVKVAPRDVTAGDXXXXXXXXXXXXXXXXNDGARTVDLEGVEKEEEKTTLGPAFATDAHCEEVLRQRAQDLDLQPTKFLWEPYEPRIFYYETVECGRRCLLTGALVFVVPNTAAQMAGACIFAFLSLLVFELIRPHLSQTDSWMYRIGGILIFFSNFLGLMVKADVSGEDAQSQKLFSVLLIGVHVIMFVAIFSQACLSIQLQLEESASDDDGDDRVHGPVMNEKPSKLHQRRGSIVSRVGDVGRNIPAVARSSG 2020 GYWR V +C+ E+C G + STS D YC +GY GPYCA C + +GN C C G T R +++ V L+ L +++L+GG + + +R+ V P+G S+G G A E G E+ +S W++ ++ +G + R +P ++KI++VVWQILT +PPAY +FL ++D N DI + S C++ V+FY++L++ T+ PI + G+L L+YT A + G ++ +R+ A +RH +A LL+ FLVF+S ST +F TF+C AVE E YL RADYSL+C H Y+VYAGVMI++YPIGIPL++ F+L +R+ +NP PR + + P D D S W S+ SR G G VS+ T EE L++R Q+ DL P+ FLW+ ++P ++YYE +ECGRR LLTGAL+F+ P+TAAQ A AC+FAF SLL FEL+RPHL DSW+YR+G + IF SNFL L+ K D +GE +S + +LI V+V++ VA+ + + Q ++++ ++ + +E+ +R S D GR V +SG Sbjct: 412 GYWRSGKESATVLACIHAESCAGATHV----STS-------DDYCSSGYEGPYCASCQAGYGTGIGNTCHSCDG---TRFRWLIFAGSLFTLVTLLVLGLAVVFLIGGLDAVEGVRRTVSRSLSVTTRLPLGRRSASVGSGAAAAAEGAVPGFAHSFTPAFEEGRGERHSSQGKQXXXXXXXXXTAMDSFNRPGEGWRKEDEKSAACCGIGEKIKRWTARLPMDKLKILVVVWQILTVFPSITGAEFPPAYAQFLSIIDFINLDIGSIFSGTCILPRVSFYQRLLVTTVTPIGLAGVLLLTYTMA-KSRAGIGSASVVARKAAWSRHMAAGLLLTFLVFTSTSTVVFKTFACDDEAVEG-ESYL-RADYSLSCNTATHTWYKVYAGVMIVVYPIGIPLLYAFILWINRESLNPR---------PRPKATDDDVDETTVPAQ--DADASGW--SVASRKA--GGXXXGEYVSKE-------------------------------------------------------TPEELEERLQKRRQNPDLVPSMFLWKDFDPDMYYYEVIECGRRILLTGALIFIAPHTAAQAAMACMFAFASLLGFELLRPHLDPADSWLYRLGCVTIFLSNFLALLTKVDAAGESNRS--ILGGILIAVNVLLVVAVLASTWFATQQTVDDNREGENAFAVAKVMLTHEQVVAQSKRLEREESAQRDTGRREARVGGNSG 1050
BLAST of mRNA_F-serratus_M_contig108.756.1 vs. uniprot
Match: D7FRH4_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH4_ECTSI) HSP 1 Score: 302 bits (774), Expect = 8.180e-80 Identity = 222/683 (32.50%), Postives = 322/683 (47.14%), Query Frame = 2 Query: 2 GYWRGDVNRTIVQSCLLTEACKGGRGIISLNSTSTENYLEDDRYCETGYVGPYCAVCAKDFRRLLGNECLDCQGHWGTATRAVLWVAIALAPVLLISLMM---YLLGGTRSFKQLRKKVC------GRCCPPEPVGVTQWSLGGGGDITAGEGGEIEKRTSWKRMAKRLGALVL------------------------------------------------RAIPFQQIKIIIVVWQILTQCSDFADIPYPPAYKRFLGVLDAFNFDISRLLSTLCLMKAVNFYEKLVIVTLAPIIVLGILGLSYTAAMRWFQGSDRNAIESRQQAKARHASASLLVLFLVFSSVSTTIFSTFSC--HAVEDLEVYLLRADYSLTCYDNLHVLYQVYAGVMILMYPIGIPLIFTFLLLKHRDKINPPTAAEVARRGPRARTFPGRQGHVSNPGDLPDMDDSAWTTSLTSRSLYRGQNSMGPVVSRARVKVAPRDVTAGDXXXXXXXXXXXXXXXXNDGARTVDLEGVEKEEEKTTLGPAFATDAHCEEVLRQRAQDLDLQPTKFLWEPYEPRIFYYETVECGRRCLLTGALVFVVPNTAAQMAGACIFAFLSLLVFELIRPHLSQTDSWMYRIGGILIFFSNFLGLMVKADVSGEDAQSQKLFSVLLIGVHVIMFVAIFSQACLSIQLQLEE 1873 GYWR + C+ AC G I S YC GY GPYC VC + F R GN C C+G T +R ++ A V+L+ +++ YL+GG + + LR+ + GR VG + S+G A G E+E+R + A R G + +P ++KI++VVWQIL+ + +PPAY RFL +D +FD+ +LS C+ ++FY+ L++ TL P+ V +L L+Y A R ++ R+ A +RH +A LL+ FLVF + ST F TF+C AVE LRADYS+ C+ + H Y+VYAGVMI++YP+GIPL++ F+L ++R+ +NP R +T G V NP D S T R Y+ A + DLE E L +R ++ DL P+ FLW+ + P I+YYE VECGRR LLTG LVF+ PNTAAQ+A AC+FAF+SLL FEL+RPHL DSW+YR+G + IF SNFL L++K D SG D + +F ++IG+++ + +A+ + S+Q ++E Sbjct: 901 GYWRSSRESLSIHQCVHHTACVGATQISSAQD-----------YCGEGYQGPYCTVCTEGFGRGAGNTCHSCEG---TKSRLLIAAGSLFALVILLLVILAVVYLVGGLDAVEGLRRSLSTRSVLSGRDSSSHKVGSSGKSIG----RNALTGSEVEERRG-EGAASRKGVTSVPISEVDVSEMKSDASSDTDGEDDHAPPMARGGDQPGCCGQGEKIKRWAARLPMDKLKILVVVWQILSVFPSITAVDFPPAYARFLSWIDMLSFDLGHVLSASCVFPVMDFYQSLLLTTLGPLGVAMVLVLTYWIAKRRAGAGSAGSL-MRRAAWSRHMAAGLLLSFLVFIATSTMAFKTFACDDEAVEGKSY--LRADYSIQCHTDKHEWYKVYAGVMIMVYPVGIPLLYAFILWQNRESLNP-----------RVKT-----GAVVNPR----ADGS------TDRITYK--------------------------------------------ANSEDLE----------------------EKLEKRRRNPDLIPSMFLWKDFGPEIYYYEVVECGRRILLTGVLVFISPNTAAQVAAACMFAFVSLLGFELLRPHLDPVDSWLYRLGCLCIFLSNFLALLIKVD-SGVDG-NHDVFGAIMIGINMFLIMAVLLASWFSMQQTMDE 1467
BLAST of mRNA_F-serratus_M_contig108.756.1 vs. uniprot
Match: A0A6H5JUJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUJ2_9PHAE) HSP 1 Score: 299 bits (765), Expect = 1.520e-78 Identity = 180/433 (41.57%), Postives = 250/433 (57.74%), Query Frame = 2 Query: 2 GYWRGDVNRTIVQSCLLTEACKGGRGIISLNS--------------------------------TSTENYLEDDRYCETGYVGPYCAVCAKDFRRLLGNE-CLDCQGHWGTATRAVLWVAIALAPVLLISLMMYLLGGTRSFKQ---LRKKVCGRCCPPEPVGVTQWSLGGGGDITAGEGGEIEKRTSWKRMAKRLGALVLRAIPFQQIKIIIVVWQILTQCSDFADIPYPPAYKRFLGVLDAFNFDISRLLSTLCLMKAVNFYEKLVIVTLAPIIVLGILGLSYTAAMRWFQG----SDRNAIESRQQAKARHASASLLVLFLVFSSVSTTIFSTFSCHAVEDLEVYLLRADYSLTCYDNLHVLYQVYAGVMILMYPIGIPLIFTFLLLKHRDKINPPTAA-EVARRGPRARTFPGRQGHVSNPGDLPDMDD 1177 GYWRGD+ +T ++ C AC GG G+I+ +S T++ ED RYC G+ G YCAVCA +RR G + C+ C G W + RA WV ++ V++++L ++L+GG + + L+ K+ VT S G R S + A +G +LRA+PFQ++KI++VVWQILTQ S A+IPYPP+Y+RFL +LD FNFDI+ L+ C++ + FY +LV VTL P+ +L L L+Y AM + S R + E+RQ+A RHASA+LL+LFLVFSSVSTT+FSTFSC VEDL+V LLRADYS++C H Y+ YA +MIL+YPIG+P++F LLLK RDK+NPP ++A T P +G VS+ D M+D Sbjct: 1016 GYWRGDITQTYIRKCWNPSACAGGTGVITSSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATASSFEYEDTRYCIKGHRGAYCAVCADGYRRFSGGQLCVSCGGVWSSGARATFWVLGVVSLVVVMALAVFLIGGLTAVSRASALQGKLSSCLLGRRSKTVTASSSGST---------LAPSRASRRAAAGTVGLCLLRAVPFQKLKILVVVWQILTQFSHLAEIPYPPSYQRFLNILDIFNFDITWPLTAACIVDNITFYHRLVWVTLGPLALLTFLSLTYVIAMHVHRRRNYFSSRASAEARQRAVVRHASAALLILFLVFSSVSTTVFSTFSCDYVEDLDVSLLRADYSISCDHPDHTFYKAYAALMILLYPIGVPMLFAVLLLKRRDKLNPPVMTLDLA-----PETDPVLKGRVSS--DTARMED 1432
BLAST of mRNA_F-serratus_M_contig108.756.1 vs. uniprot
Match: D7FRH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH0_ECTSI) HSP 1 Score: 293 bits (749), Expect = 1.050e-76 Identity = 214/727 (29.44%), Postives = 321/727 (44.15%), Query Frame = 2 Query: 2 GYWRGDVNRTIVQSCLLTEACKGGRGIISLNSTSTENYLEDDRYCETGYVGPYCAVCAKDFRRLLGNECLDCQGHWGTATRAVLWVAIALAPVLLISLMMYLLGGTRSFKQLRKKVCGRCCPP-----------EPVGVT--------------------------------------------------------------------------------QWSLGGGG--------DITAGEGGEIEKRTSWKR-MAKRLGALVLRAIPFQQIKIIIVVWQILTQCSDFADIPYPPAYKRFLGVLDAFNFDISRLLSTLCLMKAVNFYEKLVIVTLAPIIVLGILGLSYTAAMRWFQGSDRNAIESRQQAKARHASASLLVLFLVFSSVSTTIFSTFSC--HAVEDLEVYLLRADYSLTCYDNLHVLYQVYAGVMILMYPIGIPLIFTFLLLKHRDKINPPTAAEVARRGPRARTFPGRQGHVSNPGDLPDMDDSAWTTSLTSRSLYRGQNSMGPVVSRARVKVAPRDVTAGDXXXXXXXXXXXXXXXXNDGARTVDLEGVEKEEEKTTLGPAFATDAHCEEVLRQRAQDLDLQPTKFLWEPYEPRIFYYETVECGRRCLLTGALVFVVPNTAAQMAGACIFAFLSLLVFELIRPHLSQTDSWMYRIGGILIFFSNFLGLMVKADVSGEDAQSQKLFSVLLIGVHVIMFVAIFSQACLSIQLQLEES 1876 G+WR ++ CL ++AC G I++ D YC+ GY GPYCAVCA+ + + +GN C C G A V +A ++L+GG + +R V P P G T ++S+GGGG D A + S R + +++ R +P ++KI++VVWQILT + YPP+Y RFL +D NFD+ + S C + + FYE+L++ TLAPI + G+L ++Y A R G + +R+ A +RH +A LL+ FLVF+S ST +F TF+C AVE LRADY ++C N H Y+VYAGVMI +YPIGIPL++ F+L ++RD +NP R+ Y S G ++L+G E GP T+ ++ L +R Q+ DL P+ FLW+ + P ++YYE +ECGRR LLTGAL+F+ P+T AQ A AC+FAF SLL FEL+RPHL DSW+YR+G ++IF SNFL L++KAD +GE ++S + +++ +++ + +A+ + Q +++S Sbjct: 934 GHWRSSEESLVIHGCLHSDACVGATEIVT-----------SDDYCDGGYEGPYCAVCAEGYGKGVGNTCHSCTGSKARLLIAAGSVFFLVAXXXXXXAAVFLIGGLDAVASVRGSVARSLRVPGKTTTRAEQPFPPPGPTLPERSASARNISASRQVDDPAVEFDSGEVGGPITGGGFDAPDDLFGYDNGEDKSDGSIDFSDANLVLPLAIAGKDAAFCERFSVGGGGGSHPPVDADADAAPAEAVAGGQSGSRGLGEKIKGWASR-VPLDKLKILVVVWQILTVFPSITGVDYPPSYSRFLSWIDVVNFDVGHIFSASCALPFLTFYERLLLTTLAPIGLGGVLVVTYWMAKRT-AGIGSAGVLARRAAWSRHMAAGLLLTFLVFTSSSTIVFKTFACDDEAVEGES--FLRADYGISCKTNKHAWYEVYAGVMIAVYPIGIPLLYAFILWRNRDSLNP-------------------------------------------RAYY----STG-----------------------------------------LELDGEMSE------GPR-ETEEELQDRLEKRRQNPDLVPSMFLWKDFGPDMYYYEVIECGRRILLTGALIFIAPHTVAQAAIACMFAFASLLGFELLRPHLDPADSWLYRLGCVVIFLSNFLALLIKADTAGEGSRS--VLGGIMVAINIFLILAVLFSTWFATQQSVDDS 1548
BLAST of mRNA_F-serratus_M_contig108.756.1 vs. uniprot
Match: D7FRH1_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH1_ECTSI) HSP 1 Score: 276 bits (705), Expect = 5.890e-72 Identity = 214/717 (29.85%), Postives = 317/717 (44.21%), Query Frame = 2 Query: 2 GYWRGDVNRTIVQSCLLTEACKGGRGIISLNSTSTENYLEDDRYCETGYVGPYCAVCAKDFRRLLGNECLDCQGHWGTATRAVLWVAIALAPVLLISL---MMYLLGGTRSFKQLRKKVC----------GRCCPPEPVGVTQWS---------LGG----------GGDITAGEGGEIEKRTSWKRMA----------KRLGALVLRA---------------------------------------IPFQQIKIIIVVWQILTQCSDFADIPYPPAYKRFLGVLDAFNFDISRLLSTLCLMKAVNFYEKLVIVTLAPIIVLGILGLSYTAAMRWFQGSDRNAIES-----RQQAKARHASASLLVLFLVFSSVSTTIFSTFSC--HAVEDLEVYLLRADYSLTCYDNLHVLYQVYAGVMILMYPIGIPLIFTFLLLKHRDKINPPTAAEVARRGPRARTFPGRQGHVSNPGDLPDMDDSAWTTSLTSRSLYRGQNSMGPVVSRARVKVAPRDVTAGDXXXXXXXXXXXXXXXXNDGARTVDLEGVEKEEEKTTLGPAFATDAHCEEVLRQRAQDLDLQPTKFLWEPYEPRIFYYETVECGRRCLLTGALVFVVPNTAAQMAGACIFAFLSLLVFELIRPHLSQTDSWMYRIGGILIFFSNFLGLMVKADVSGEDAQSQKLFSVLLIGVHVIMFVAIFSQACLSIQLQLEESASDD 1888 GYWR +V CL ++AC G I S D YC+ Y GPYCAVCA+ + C C G +R +++ I +++ L +++L+GG + +R + G G + S GG G G E++T +A +RL A A +P ++KI++VVWQILT + +PP+Y RFL +D N D+ + + CL+ +V+FY++L++ TL PI GL + + +R I S R+ A +RH +A LL+ FLVF+S ST F TF C AVE E YL RADYSL+C + H+ Y++YAG+MI++YPIGIPL++ F+L +RD +NP R R + P+ A VEK K +L PA D +E L QR ++ DL P+ FLW+ + P ++YYE +ECGRR LLTG L+F TAAQ A ACIFAF+SLL FEL+RPHL D W+YR+G ++IF SNFL L++K D +GE ++ +LI V+V + +A+ S + + Q ++++ +++ Sbjct: 558 GYWRSSQESLVVHGCLHSDACAGATQISS-----------SDDYCKDCYEGPYCAVCAEGCCEGSSHTCHRCSG---IKSRLLMFAGIVFGVTIVLFLGVAIVFLIGGLDAVDSVRLSMSRKLSISGKPRGGISRSHHEGTSSISSKRPSGRSNFGGDXXXXXXXXRGRSAAVGNAAVDEEKTRTAAVAGLGPGDYSPERRLSAAATAAAIDRARILEAGARMSDAGGESARTGCCGLGGRIKRWVSLLPMDKLKILVVVWQILTVFPSITGVQFPPSYSRFLSWIDVVNLDVGHVFTASCLLPSVSFYQRLLLTTLTPI------GLGCVLVLTHWMAKERAGIGSASVLARKAAWSRHMAAGLLLTFLVFTSASTMAFKTFPCDDEAVEG-ESYL-RADYSLSCKTDKHMYYRIYAGIMIVVYPIGIPLLYAFILWINRDSLNP----------------------------------------------------------RVRSEAIPQPTGA-----------------------------VEK---KVSLVPANYGDG-LQERLDQRRRNPDLVPSMFLWKDFGPDMYYYEVIECGRRILLTGVLIFFAAGTAAQAAMACIFAFVSLLGFELLRPHLDPADMWLYRLGCVIIFLSNFLALLIKVDAAGEG--NRAALGGILIAVNVFLILAVLSTSWFATQQMVDDNRNEE 1159
BLAST of mRNA_F-serratus_M_contig108.756.1 vs. uniprot
Match: A0A6H5JS31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS31_9PHAE) HSP 1 Score: 277 bits (708), Expect = 9.500e-72 Identity = 214/709 (30.18%), Postives = 324/709 (45.70%), Query Frame = 2 Query: 2 GYWRGDVNRTIVQSCLLTEACKGGRGIISLNSTSTENYLEDDRYCETGYVGPYCAVCAKDFRRLLGNECLDCQGHWGTATRAVLWVAIALAPVLLISL---MMYLLGGTRSFKQLR----------------------------KKVCGR----------------------CCPPEPVGVTQWSLG-GGGDI-------TAGEGGEIEKRTSWKRMAKR--------------LGALVLR---AIPFQQIKIIIVVWQILTQCSDFADIPYPPAYKRFLGVLDAFNFDISRLLSTLCLMKAVNFYEKLVIVTLAPIIVLGILGLSYTAAMRWFQGSDRNAIESRQQAKARHASASLLVLFLVFSSVSTTIFSTFSC--HAVEDLEVYLLRADYSLTCYDNLHVLYQVYAGVMILMYPIGIPLIFTFLLLKHRDKINPPTAAEVARRGPRARTFPGRQGHVSNPGDLPDMDDSAWTTSLTSRSLYRGQNSMGPVVSRARVKVAPRDVTAGDXXXXXXXXXXXXXXXXNDGARTVDLEGVEKEEEKTTLGPAFATDAHCEEVLRQRAQDLDLQPTKFLWEPYEPRIFYYETVECGRRCLLTGALVFVVPNTAAQMAGACIFAFLSLLVFELIRPHLSQTDSWMYRIGGILIFFSNFLGLMVKADVSGEDAQSQKLFSVLLIGVHVIMFVAIFSQACLSIQLQLEESASDD 1888 GYWR +V CL ++AC GG I S D YC+ Y GPYCAVCA+ + C C G +R +++ I +++ L +++L+GG + +R KK GR E T +G G GD TA +++ + A+ LG + R +P ++KI++VVWQILT + +PP+Y RFL +D N D+ ++ + CL+ +V+FY++L++ TL PI + +L L++ A + G ++ +R+ A +RH +A LL+ FLVF+S ST F TF C AVE E YL RADYSL+C + H+ +++YAG+MIL+YPIGIPL++ F+L +R+ +NP R R + P+ GVE + L PA D EE L QR + DL P+ FLW+ + P ++YYE +ECGRR LLTG L+F TAAQ A ACIFAF+SLL FEL+RPHL D+W+YR+G ++IF SNFL L++K D +GE ++ +LI V+V + +A+ S + + Q ++++ +++ Sbjct: 903 GYWRSSQESLVVHGCLNSDACAGGTQISS-----------SDDYCKDCYEGPYCAVCAEGCCEGSSHTCYRCSG---IKSRLLMFAGIVFGVTIVLFLGLAIVFLIGGLDAVNSMRLSMSRKLSVSGKIRGSISRSYHEGSSTSKKPSGRSNFGEDDXXXXXXXXXSAAVGDAAVDEEKTRTAAVIGLGPGDYSPERPLSTAATAAAVDRARILEVGARMSDAGGESSRTGCCGLGGRIKRWVSLLPMDKLKILVVVWQILTVFPSITGVQFPPSYSRFLSWVDVVNLDVGQVFTASCLLPSVSFYQRLLLTTLTPIGLGCVLVLTHWMAKQR-AGIGSASVLARRAAWSRHMAAGLLLTFLVFTSTSTMAFKTFPCDDEAVEG-ESYL-RADYSLSCKTDKHMYFRIYAGIMILVYPIGIPLLYAFILWINRESLNP----------------------------------------------------------RVRSEATPQPTG-----------------------------GVEMD---VALVPANYGD-DLEERLEQRRNNPDLVPSMFLWKDFGPDMYYYEVIECGRRILLTGVLIFFAAGTAAQAAMACIFAFVSLLGFELLRPHLDPADAWLYRLGCVIIFLSNFLALLIKVDAAGEG--NRAALGGILIAVNVFLILAVLSTSWFATQQMVDDNRNEE 1501
BLAST of mRNA_F-serratus_M_contig108.756.1 vs. uniprot
Match: A0A6H5K4A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A5_9PHAE) HSP 1 Score: 272 bits (696), Expect = 3.340e-70 Identity = 201/735 (27.35%), Postives = 299/735 (40.68%), Query Frame = 2 Query: 2 GYWRGDVNRTIVQSCLLTEACKGGRGIISLNSTSTENYLEDDRYCETGYVGPYCAVCAKDFRRLLGNECLDCQGHWGTATRAVLWVAIALAPVLLISLMMYLLGGTRSFKQ-------------------LRKKVC--------------GRCCPPEPVGVTQW-----------SLGGG-GDITAGEGGEIEKRTSWKRMAKRLGALVLRAIPFQQIKIIIVVWQILTQCSDFADIPYPPAYKRFLGVLDAFNFDISRLLSTLCLMKAVNFYEKLVIVTLAPIIVLGILGLSY------------------------------------------------------------TAAMRWFQGSDRNAIESRQQAK-ARHASASLLVLFLVFSSVSTTIFSTFSCHAVEDLEVYLLRADYSLTCYDNLHVLYQVYAGVMILMYPIGIPLIFTFLLLKHRDKINPPTAAEVARRGPRARTFPGRQGHVSNPGDLPDMDDSAWTTSLTSRSLYRGQNSMGPVVSRARVKVAPRDVTAGDXXXXXXXXXXXXXXXXNDGARTVDLEGVEKEEEKTTLGPAFATDAHCEEVLRQRAQDLDLQPTKFLWEPYEPRIFYYETVECGRRCLLTGALVFVVPNTAAQMAGACIFAFLSLLVFELIRPHLSQTDSWMYRIGGILIFFSNFLGLMVKADVSGEDAQSQKLFSVLLIGVHVIMFVAIFSQACLSIQLQLEESASDD 1888 GYWR V ++ CL EACKGG + E YC GYVGP CAVC F + + EC C + +L YL+GG + L +KV G V W S+GG G T G G + + R+A L AL P ++KI+IVVWQI + +D P+PP Y++FL ++ F+FD+ +LS CL ++FY+KL+IVT+ P++ L LG+++ +A+R G +N + R ARH + L+VL+LV++ +ST +F TF+C + ++ LRAD+ + C H LY+ YAGVM+ +YP+GIP +F + LL+ R +INPPT + +R R V R +T D +D + PT FLW Y P+ +YYE EC RR LLTG LVF+VP+T Q+A +CIFA LSL+VFEL+RPH++ D +YR G ++I F+NFL L++K+ + +D+ +SV L+ V+++ F++I+ AC + + S + D Sbjct: 1063 GYWRAKVTSLTIRECLNEEACKGGTTV-----------AEVQEYCNEGYVGPQCAVCGTGFGKGVAYECHPCTAGFQGGMYFLLAXXXXXXXXXXXXXXXYLVGGKSAVSSTVVSTKESALRIQHRGSVLLTRKVSSFGRARSDFGDLTEGPSVESSAVSTKAWGTEGKAAPTDVSVGGSRGQGTGGTGNDRDDDAPPTRVANLLAAL-----PLSKLKIVIVVWQITSAFADITKAPFPPIYEKFLSIIGIFSFDLGWILSAACLTTGIDFYDKLLIVTIGPLVPLCFLGITFFVGSRPAKETNMSPNATTADGGASGSGGRELEEGRVQGACSGSTTSVTANSGAAAREPSVRSALRAKSGDRKNPEQERLWGLFARHTTMMLIVLYLVYTQISTVVFQTFACEHLPEIGKRYLRADFGIECDTQRHTLYKAYAGVMMCIYPLGIPAVFLYFLLRQRSRINPPTDEALKKR-------------------------------------------------RGGRHVVERKMTVRD-------------------------------------------------------KDQSIAPTSFLWNAYFPKCYYYEVFECIRRLLLTGILVFLVPDTPGQVAFSCIFAILSLMVFELLRPHVNHIDRQLYRTGCLVILFTNFLALVIKSGAADKDSSGSAAYSVALVIVNIMFFLSIWFNACTTAKAMFSRSHAQD 1677
BLAST of mRNA_F-serratus_M_contig108.756.1 vs. uniprot
Match: D7FRH3_ECTSI (Polymorphic membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH3_ECTSI) HSP 1 Score: 261 bits (666), Expect = 9.810e-67 Identity = 207/697 (29.70%), Postives = 307/697 (44.05%), Query Frame = 2 Query: 2 GYWRGDVNRTIVQSCLLTEACKGGRGIISLNSTSTENYLEDDRYCETGYVGPYCAVCAKDFRRLLGNECLDCQGHWGTATRAVLWVAIALAPVLLISLMM---YLLGGTRSFKQLRKKVC-----------GRCCPPEPVGVTQWSLGGG--GDITAGE---GGEIEKRTSWKRMAKRLGALVLRA------------------------------------------------IPFQQIKIIIVVWQILTQCSDFADIPYPPAYKRFLGVLDAFNFDISRLLSTLCLMKAVNFYEKLVIVTLAPIIVLGILGLSYTAAMRWFQGSDRNAIESRQQAKARHASASLLVLFLVFSSVSTTIFSTFSC--HAVEDLEVYLLRADYSLTCYDNLHVLYQVYAGVMILMYPIGIPLIFTFLLLKHRDKINPPTAAEVARRGPRARTFPGRQGHVSNPGDLPDMDDSAWTTSLTSRSLYRGQNSMGPVVSRARVKVAPRDVTAGDXXXXXXXXXXXXXXXXNDGARTVDLEGVEKEEEKTTLG--PAFATDAHCEEVLRQRAQDLDLQPTKFLWEPYEPRIFYYETVECGRRCLLTGALVFVVPNTAAQMAGACIFAFLSLLVFELIRPHLSQTDSWMYRIGGILIFFSNFLGLMVKADVSGEDAQSQKLFSVLLIGVHVIMFVAIFSQACLSIQLQLEESA 1879 GYWR + C + AC G I S YC GY GPYCAVCA+ F R GN C C+G T +R ++ A V+L+ +++ YL+GG + + LR+ + GR G + S+G D A E+E+R + + A R G + +P +IKI++VVWQIL+ + +PPAY RFL ++ +FD+ +LS C+ ++FY++L++ TL P+ V +L L+Y A R A+ R+ A +RH +A LL+ FLVF + ST F TF+C AVE E YL ADY + C+ + H Y+VYAG+MIL +NPP A +D SA +E KT P F ++ EE L +R ++ DL P+ FLW+ + P ++YYE VECGRR LLTG L+F+ PNTAAQ+A AC+FAF+SLL FEL+RPHL DSW+YR+G + IF SNFL L++K D +G+ ++ +F ++I +++++ +A+ + S+Q ++E A Sbjct: 894 GYWRSGGESLTIHQCSPSSACVGAAQISSAQD-----------YCGEGYQGPYCAVCAEGFGRGAGNSCHSCEG---TKSRLLIAAGSLFALVILLLIILTVAYLVGGLDAVEGLRRSLSTSFVGDRSVLSGRDSSSHKTGSSSKSIGRDRLADSVAPTFKVTSEVEERGA-EGAASRKGVTSVPVSEVDVSEMKSDASSDTDTEDDNAPPMVRGGGQPGCCGHGEKIKRWAARLPMDKIKILVVVWQILSVFPSITAVDFPPAYARFLSWINMLSFDLEHVLSASCVFPVMDFYQRLLVTTLVPLGVAMVLVLTYWMAKRRAGSGSAGAL-GRRAAWSRHVAAGLLLSFLVFIATSTMAFKTFACDDEAVEG-ESYL-GADYGIQCHTDKHTWYKVYAGIMIL-------------------SLNPPAEASTL------------------------VDSSA-------------------------------------------------------------------DERKTNKAYKPKFMSE-DLEEKLEKRRRNPDLVPSMFLWKDFGPDMYYYEVVECGRRILLTGVLIFISPNTAAQVAAACMFAFVSLLGFELLRPHLDPVDSWLYRLGCMCIFLSNFLALLIKVDSAGDS--NRDVFGWIMIVINLLLIMAVLLASWFSMQQTMDEYA 1459
BLAST of mRNA_F-serratus_M_contig108.756.1 vs. uniprot
Match: A0A6H5J7J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J9_9PHAE) HSP 1 Score: 258 bits (658), Expect = 1.280e-66 Identity = 179/619 (28.92%), Postives = 267/619 (43.13%), Query Frame = 2 Query: 2 GYWRGDVNRTIVQSCLLTEACKGGRGIISLNSTSTENYLEDDRYCETGYVGPY-----CAVCAKDFRRLLGNECLDCQGHWGTATRAVLWVAIALAPVLLISLMMYLLGGTRSFKQLRKKVCGRCCPPEPVGVTQWSLGGGGDITAGEGGEIEKRTSWKRMAKRLGALVLRAIPFQQIKIIIVVWQILTQCSDFADIPYPPAYKRFLGVLDAFNFDISRLLSTLCLMKAVNFYEKLVIVTLAPIIVLGILGLSYTAAMRWFQGSDRNAIESRQ----QAKARHASASLLVLFLVFSSVSTTIFSTFSCHAVEDLEVYLLRADYSLTCYDNLHVLYQVYAGVMILMYPIGIPLIFTFLLLKHRDKINPPTAAEVARRGPRARTFPGRQGHVSNPGDLPDMDDSAWTTSLTSRSLYRGQNSMGPVVSRARVKVAPRDVTAGDXXXXXXXXXXXXXXXXNDGARTVDLEGVEKEEEKTTLGPAFATDAHCEEVLRQRAQDLDLQPTKFLWEPYEPRIFYYETVECGRRCLLTGALVFVVPNTAAQMAGACIFAFLSLLVFELIRPHLSQTDSWMYRIGGILIFFSNFLGLMVKADVSGEDAQSQKLFSVLLIGVHVIMFVAI 1831 GYWR + +C T+AC GG+ D +C +GY+GP C+VC F L + C C AV +A +A ++++ YLL ++ G G +R +LRA+P Q +KII+VVWQILTQ +D A+I YP AY+ FL +D NFD+ L+ CL ++F+++L++ TL P++ +G L ++Y A+R RN Q + +H SA LL+ FL++SSVS+T+F TF+C ++D YL R DY++ C D H ++VYAG+M+++YP+GIPL++ LL + RD LG A RA QP LWEPY P FYYE +ECGRR +LTG + F+ PN AAQ+A + AF LVFE++ P+ S++D+W+ R G +++F S F L++K DVS E QSQ +F+ + + HV++ +AI Sbjct: 597 GYWRATSESDKILACYNTDACTGGQ-------------TGADSFCASGYMGPCEEGEDCSVCETGFAPSLAHTCTRCSSSRRQGLLAVAVIAALVAVFAIVTIFKYLLST--------------------------------EVDEGNAGCFHRR-------------ILRAVPVQTLKIIVVVWQILTQFADVANITYPQAYQDFLSAIDVVNFDLGSALAAGCLWPDIDFHDRLLLGTLGPLVAVGFLVMTYRVAVR------RNGTAGGQTPADNTRHKHLSALLLLTFLIYSSVSSTVFQTFACETLDDGIEYL-RVDYTIHCTDAKHKAFEVYAGIMVVVYPVGIPLLYAILLFQRRD----------------------------------------------------------------------------------------------------------------VLGDA-------------RADKTVAQPIAGLWEPYRPERFYYEVIECGRRIMLTGVVAFIFPNDAAQIAITMLVAFFFSLVFEVMSPYTSESDTWLSRGGHVIVFLSMFDALLLKVDVSSESEQSQDVFAGVFVAGHVLLILAI 1025 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig108.756.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig108.756.1 >prot_F-serratus_M_contig108.756.1 ID=prot_F-serratus_M_contig108.756.1|Name=mRNA_F-serratus_M_contig108.756.1|organism=Fucus serratus male|type=polypeptide|length=618bp MMYLLGGTRSFKQLRKKVCGRCCPPEPVGVTQWSLGGGGDITAGEGGEIEback to top mRNA from alignment at F-serratus_M_contig108:204206..215326+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig108.756.1 ID=mRNA_F-serratus_M_contig108.756.1|Name=mRNA_F-serratus_M_contig108.756.1|organism=Fucus serratus male|type=mRNA|length=11121bp|location=Sequence derived from alignment at F-serratus_M_contig108:204206..215326+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig108:204206..215326+ >mRNA_F-serratus_M_contig108.756.1 ID=mRNA_F-serratus_M_contig108.756.1|Name=mRNA_F-serratus_M_contig108.756.1|organism=Fucus serratus male|type=CDS|length=3708bp|location=Sequence derived from alignment at F-serratus_M_contig108:204206..215326+ (Fucus serratus male)back to top |