mRNA_F-serratus_M_contig1070.691.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1070.691.1 vs. uniprot
Match: A0A6H5JB66_9PHAE (Methylenetetrahydrofolate reductase (NAD(P)H) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JB66_9PHAE) HSP 1 Score: 405 bits (1042), Expect = 4.220e-134 Identity = 201/262 (76.72%), Postives = 224/262 (85.50%), Query Frame = 2 Query: 101 GFACALDLVKYMREKHGDYFGISVAGYPEGHPDRIKEVPGGLASLSEAEKGRCKIDKDDDGKEVVYVCSDADFEIEMKYIKEKVDAGADFIITQMFFDPAVYLSYVKACRDRGIKVPIVPGLMCINAWGGFKKMSGFCRTRVPPELMSKMELIKDDAKAVKAFGVEFGAEMCSTILEGGAPGLHFYTLNLEKVTVGILGRLGRLNDYVVADREEDTAQMIGMIKSSKKETE-----NGTTAQAPASAAVLQAHGE---LTPA 862 GF+CALDLVKY+R+ HGDYFGISVAGYPEGHP+RIKEVPGG+ SLSEAEKGRCKI +D +GKEVV VCSDADFEIEM YIKEKVDAGADFIITQMFFDPAVY SY+KACRDRGI+VP+VPGLMCINA+GGFKKM+GFC TRVPPELM+KME IK+D KAVKAFGV+ G EMC +L GAPGLHFYTLNLEKVTVGIL RL L DY +A+REEDTAQMIGMIKSSKK +E NG PA ++++Q H E LTPA Sbjct: 138 GFSCALDLVKYIRKNHGDYFGISVAGYPEGHPNRIKEVPGGVESLSEAEKGRCKISQDAEGKEVVTVCSDADFEIEMSYIKEKVDAGADFIITQMFFDPAVYASYIKACRDRGIEVPVVPGLMCINAYGGFKKMTGFCLTRVPPELMAKMEEIKEDEKAVKAFGVDHGEEMCKALLAAGAPGLHFYTLNLEKVTVGILDRLNLLADYKMAEREEDTAQMIGMIKSSKKSSEESGPENGAGVTPPAPSSLVQTHDEERVLTPA 399
BLAST of mRNA_F-serratus_M_contig1070.691.1 vs. uniprot
Match: A0A836CIM9_9STRA (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIM9_9STRA) HSP 1 Score: 281 bits (718), Expect = 4.470e-86 Identity = 136/225 (60.44%), Postives = 172/225 (76.44%), Query Frame = 2 Query: 101 GFACALDLVKYMREKHGDYFGISVAGYPEGHPDRIKEVPGGLASLSEAEKGRCKIDKDDDGKEVVYVCSDADFEIEMKYIKEKVDAGADFIITQMFFDPAVYLSYVKACRDRGIKVPIVPGLMCINAWGGFKKMSGFCRTRVPPELMSKMELIKDDAKAVKAFGVEFGAEMCSTILEGGAPGLHFYTLNLEKVTVGILGRLGRLNDYVVADREEDTAQMIGMIKS 775 GF CALDLV Y+R++HGD+F +SVAGYPEGHPDRI++ GGL +LSEAE+ RC + G VYVCSD DFE+E+ Y+K K +AGAD IITQMFFD +VY +V CR GI PIVPG+M INA+GGF++M+ FCRTRVPP L++++E+ KD+ A+K G+++G +MC +L+ GAPGLHFYTLNLEKVTVGIL R+G DY E DTAQM+ MIKS Sbjct: 140 GFKCALDLVHYIRQQHGDFFCVSVAGYPEGHPDRIRQRKGGLDALSEAERARCSVSP---GTGEVYVCSDKDFEVELAYLKAKCEAGADVIITQMFFDASVYGRFVAECRRVGITQPIVPGIMPINAYGGFQRMTSFCRTRVPPNLLARIEVNKDNEAAIKEIGLDYGEQMCRELLQLGAPGLHFYTLNLEKVTVGILRRMGLAGDYDEPPTE-DTAQMLDMIKS 360
BLAST of mRNA_F-serratus_M_contig1070.691.1 vs. uniprot
Match: A0A7S0A5S6_9DINO (Methylenetetrahydrofolate reductase (Fragment) n=2 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0A5S6_9DINO) HSP 1 Score: 269 bits (688), Expect = 1.180e-80 Identity = 125/210 (59.52%), Postives = 160/210 (76.19%), Query Frame = 2 Query: 101 GFACALDLVKYMREKHGDYFGISVAGYPEGHPDRIKEVPGGLASLSEAEKGRCKIDKDDDGKEVVYVCSDADFEIEMKYIKEKVDAGADFIITQMFFDPAVYLSYVKACRDRGIKVPIVPGLMCINAWGGFKKMSGFCRTRVPPELMSKMELIKDDAKAVKAFGVEFGAEMCSTILEGGAPGLHFYTLNLEKVTVGILGRLGRLNDYVVA 730 GF CALDLVKYMREK+GDYF ISVAGYPEGHPD I+ V GG+A+L+E+EK R ++ KD+ G EVV VC DA+F+ EM+Y+KEKVDAGA F+ITQMF D V+L +VK C++ GI VPIVPG+MC+N +GGF++M+ C+TR+P L+ + E A KAFG+E+G EMC +L+GGA GLHFYTLNLE+V VG L L + + A Sbjct: 132 GFTCALDLVKYMREKYGDYFSISVAGYPEGHPDNIEAVEGGVAALTESEKRRYRVAKDEHGAEVVSVCRDANFKKEMEYLKEKVDAGAQFVITQMFLDSQVFLDFVKTCKEYGINVPIVPGIMCLNNFGGFQRMTNLCKTRLPQGLLERAEAANTSDDAFKAFGIEYGTEMCKALLDGGAVGLHFYTLNLERVVVGTLKGLKLITEEQAA 341
BLAST of mRNA_F-serratus_M_contig1070.691.1 vs. uniprot
Match: A0A6V1V0A8_HETAK (Methylenetetrahydrofolate reductase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1V0A8_HETAK) HSP 1 Score: 275 bits (703), Expect = 4.080e-80 Identity = 125/203 (61.58%), Postives = 161/203 (79.31%), Query Frame = 2 Query: 101 GFACALDLVKYMREKHGDYFGISVAGYPEGHPDRIKEVPGGLASLSEAEKGRCKIDKDDDGKEVVYVCSDADFEIEMKYIKEKVDAGADFIITQMFFDPAVYLSYVKACRDRGIKVPIVPGLMCINAWGGFKKMSGFCRTRVPPELMSKMELIKDDAKAVKAFGVEFGAEMCSTILEGGAPGLHFYTLNLEKVTVGILGRLGR 709 GF+CALDLV+Y+R +GD+FGISVAGYPEGHP +IKEVPGGLA+LS +E+ RC++ + DG+E V VCSD F EM Y+K KVDAGADFIITQMFFDP VY+ +V CR GI P+VPG+MC+N +GG +KM+ C+TRVP ++ +E IK+D A+KA+GVEFG M ++EGGAPGLH+YTLNL+KVT+GI+ LG+ Sbjct: 461 GFSCALDLVRYIRATYGDFFGISVAGYPEGHPSKIKEVPGGLAALSPSERRRCRVARGGDGEETVLVCSDDHFRGEMAYLKAKVDAGADFIITQMFFDPEVYIDFVAECRKYGINCPVVPGIMCVNNYGGTRKMTDMCKTRVPQQVWDALEPIKNDVAALKAWGVEFGERMSRRLMEGGAPGLHYYTLNLDKVTLGIVDALGK 663
BLAST of mRNA_F-serratus_M_contig1070.691.1 vs. uniprot
Match: A0A7S0A6P5_9DINO (Serine hydroxymethyltransferase n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0A6P5_9DINO) HSP 1 Score: 276 bits (706), Expect = 1.830e-79 Identity = 127/210 (60.48%), Postives = 162/210 (77.14%), Query Frame = 2 Query: 101 GFACALDLVKYMREKHGDYFGISVAGYPEGHPDRIKEVPGGLASLSEAEKGRCKIDKDDDGKEVVYVCSDADFEIEMKYIKEKVDAGADFIITQMFFDPAVYLSYVKACRDRGIKVPIVPGLMCINAWGGFKKMSGFCRTRVPPELMSKMELIKDDAKAVKAFGVEFGAEMCSTILEGGAPGLHFYTLNLEKVTVGILGRLGRLNDYVVA 730 GF CALDLVKYMREK+GDYF ISVAGYPEGHPD I+ V GG+A+L+E+EK RC++ KD+ G EVV VC DA+F+ EM+Y+KEKVDAGA F+ITQMF DP V+L +VK C++ GI VPIVPG+MC+N +GGF++M+ C+TR+P L+ + E A KAFG+E+G EMC +L+GGA GLHFYTLNLE+V VG L L + + A Sbjct: 132 GFTCALDLVKYMREKYGDYFSISVAGYPEGHPDNIEAVEGGVAALTESEKRRCRVAKDEHGAEVVSVCRDANFKKEMEYLKEKVDAGAQFVITQMFLDPQVFLDFVKTCKEYGIDVPIVPGIMCLNNFGGFQRMTNLCKTRLPQGLLERAEAANTSDDAFKAFGIEYGTEMCKALLDGGAVGLHFYTLNLERVVVGTLKGLKLITEEQAA 341
BLAST of mRNA_F-serratus_M_contig1070.691.1 vs. uniprot
Match: A0A836C869_9STRA (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C869_9STRA) HSP 1 Score: 264 bits (675), Expect = 1.920e-79 Identity = 131/221 (59.28%), Postives = 157/221 (71.04%), Query Frame = 2 Query: 80 HVDGRGRGFACALDLVKYMREKHGDYFGISVAGYPEGHPDRIKEVPGGLASLSEAEKGRCKIDKDDDGKEVVYVCSDADFEIEMKYIKEKVDAGADFIITQMFFDPAVYLSYVKACRDRGIKVPIVPGLMCINAWGGFKKMSGFCRTRVPPELMSKMELIKDDAKAVKAFGVEFGAEMCSTILEGGAPGLHFYTLNLEKVTVGILGRLGRLNDYVVADREE 742 H + G CALDLV Y+RE +GDYF ISVAGYPEGHPDRIK GG+ SLSE+E R +D V VC D D+E E+ Y+K K DAGAD IITQMFFD +VY +V+ CR GI P++PG+MCINA+ GF +M+G C+TRVPPEL +ME IKDD A+KAFGVE+G E+C +L+ GAP LHFYTLNLEKVTVGIL RLG +Y A E Sbjct: 136 HWERSEGGLGCALDLVGYVREHYGDYFCISVAGYPEGHPDRIKVREGGVESLSESELTRYSVD----AAGQVQVCGDEDWEAELAYLKAKCDAGADVIITQMFFDASVYGRFVQECRRVGITAPVIPGIMCINAYAGFHRMTGLCKTRVPPELRKRMEAIKDDDAAIKAFGVEYGEELCRALLKHGAPVLHFYTLNLEKVTVGILRRLGLAGEYEAAPAAE 352
BLAST of mRNA_F-serratus_M_contig1070.691.1 vs. uniprot
Match: A0A7S2DLA9_9STRA (Methylenetetrahydrofolate reductase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DLA9_9STRA) HSP 1 Score: 266 bits (680), Expect = 6.960e-79 Identity = 126/202 (62.38%), Postives = 158/202 (78.22%), Query Frame = 2 Query: 101 GFACALDLVKYMREKHGDYFGISVAGYPEGHPDRIKEVPGGLASLSEAEKGRCKIDKDDDGKEVVYVCSDADFEIEMKYIKEKVDAGADFIITQMFFDPAVYLSYVKACRDRGIKVPIVPGLMCINAWGGFKKMSGFCRTRVPPELMSKMELIKDDAKAVKAFGVEFGAEMCSTILEGGAPGLHFYTLNLEKVTVGILGRLG 706 GF C DLVK++RE+HGDYFGISVAGYPEGHPD+I V A++SE+EKGR + + DG + + VCSDADF E+ Y+K KVDAGADFIITQMFFD VYL +V ACR +GI VP+VPG+MC+NA+GGF KM+ C+TRVP +L +M+ +++D AVKA G EFGAEM +L+GGAPGLH+Y+LNLE V +GIL RLG Sbjct: 174 GFNCGEDLVKFIREEHGDYFGISVAGYPEGHPDKIHAVKD-EATMSESEKGRSSLQTNADGTKTLSVCSDADFSDELDYLKAKVDAGADFIITQMFFDVQVYLDFVTACRAKGIMVPVVPGIMCLNAYGGFCKMTNMCKTRVPADLQKRMDAVQNDKDAVKALGAEFGAEMSEGLLKGGAPGLHYYSLNLEVVVMGILERLG 374
BLAST of mRNA_F-serratus_M_contig1070.691.1 vs. uniprot
Match: A0A7S3RM16_9SPIT (Methylenetetrahydrofolate reductase (Fragment) n=2 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RM16_9SPIT) HSP 1 Score: 260 bits (664), Expect = 1.840e-76 Identity = 126/223 (56.50%), Postives = 154/223 (69.06%), Query Frame = 2 Query: 101 GFACALDLVKYMREKHGDYFGISVAGYPEGHPDRIKEVPGGLASLSEAEKGRCKIDKDDDGKEVVYVCSDADFEIEMKYIKEKVDAGADFIITQMFFDPAVYLSYVKACRDRGIKVPIVPGLMCINAWGGFKKMSGFCRTRVPPELMSKMELIKDDAKAVKAFGVEFGAEMCSTILEGGAPGLHFYTLNLEKVTVGILGRLGRLNDYVVADREEDTAQMIGMI 769 GF+CALDLVKYMR++HGDYF ISVAGYPEGHPD IK V GG+A L+ +E R ++ KD DGKEVV VC DA+++IEM+Y+KEK DAGADFIITQMF D VY +VK C+ GI +P+VPG+MC+N GGF +M+ C+TR+PP K E A K +GVE +MC L GAPGLHFYTLNLEKV VG L LG + + A A M+ Sbjct: 132 GFSCALDLVKYMRKEHGDYFAISVAGYPEGHPDNIKVVEGGVAELTPSEARRARVVKDKDGKEVVTVCRDAEWKIEMQYMKEKADAGADFIITQMFLDAGVYAEFVKDCKAWGINIPVVPGIMCLNTLGGFYRMTELCKTRLPPGFAEKCEAANTSDDAFKKWGVEACIQMCKECLAAGAPGLHFYTLNLEKVVVGTLLGLGMITEAQAASCRSGDADAKTMV 354
BLAST of mRNA_F-serratus_M_contig1070.691.1 vs. uniprot
Match: A0A7S1C6C6_9STRA (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C6C6_9STRA) HSP 1 Score: 254 bits (649), Expect = 4.990e-76 Identity = 125/202 (61.88%), Postives = 155/202 (76.73%), Query Frame = 2 Query: 101 GFACALDLVKYMREKHGDYFGISVAGYPEGHPDRIKEVPGGLASLSEAEKGRCKIDKDDDGKEVVYVCSDADFEIEMKYIKEKVDAGADFIITQMFFDPAVYLSYVKACRDRGIKVPIVPGLMCINAWGGFKKMSGFCRTRVPPELMSKMELIKDDAKAVKAFGVEFGAEMCSTILEGGAPGLHFYTLNLEKVTVGILGRLG 706 GFACALDLVKY++EKHGD+FGISVAGYPEGHP I +V G A LS+AEKGR +D + YVCSDADF E+ Y+KEKVDAGA+ IITQMFFD V++S+V ACR GI VPI+PG+M I A+GGFK+M+ FC++RVP E+ ++++ +KDD++AVK GVE G EM +L G PGLHFY LNLEKV VGI+ LG Sbjct: 139 GFACALDLVKYIKEKHGDFFGISVAGYPEGHPSVINKVEEGRA-LSDAEKGRVVTMEDGE-----YVCSDADFAAEIAYLKEKVDAGAELIITQMFFDVDVFVSFVAACRAAGIAVPILPGIMVIQAYGGFKRMTAFCKSRVPKEVHARLDAVKDDSEAVKRVGVEIGTEMSRALLAAGVPGLHFYCLNLEKVVVGIMENLG 334
BLAST of mRNA_F-serratus_M_contig1070.691.1 vs. uniprot
Match: K0TG67_THAOC (Methylenetetrahydrofolate reductase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TG67_THAOC) HSP 1 Score: 255 bits (652), Expect = 1.120e-75 Identity = 127/223 (56.95%), Postives = 162/223 (72.65%), Query Frame = 2 Query: 101 GFACALDLVKYMREKHGDYFGISVAGYPEGHPDRIKEVPGG-LASLSEAEKGRCKIDKDDDGKEVVYVCSDADFEIEMKYIKEKVDAGADFIITQMFFDPAVYLSYVKACRDRGIKVPIVPGLMCINAWGGFKKMSGFCRTRVPPELMSKMELIKDDAKAVKAFGVEFGAEMCSTILEGGAPGLHFYTLNLEKVTVGILGRLGRLNDYVVADREEDTAQMIGM 766 GFACALDLV+Y+R++ GD FGISVAGYPEGHP+RI ++ A++S++EKGRC DG + YVC D D++ EM Y+KEKVDAG DFIITQMFFD V+ ++VK CR+ GI P+VPGLMCINA+ GFKKM+ FC+TRVP +L KM+ +KDD AVK FGV FG+E+C ++L+ G LHFYTLNLEKV GI LG + V E+D M+ + Sbjct: 142 GFACALDLVRYIRKEFGDSFGISVAGYPEGHPNRISQLTDEEAANMSDSEKGRCCTH---DG--ITYVCKDDDYKKEMDYLKEKVDAGGDFIITQMFFDAEVFKTFVKDCREWGINCPVVPGLMCINAYPGFKKMTKFCKTRVPKDLGEKMDAMKDDPDAVKKFGVTFGSEICRSLLDSGVEILHFYTLNLEKVVYGITDDLGITSGLVEKSDEKDAKDMVAV 359 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1070.691.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1070.691.1 >prot_F-serratus_M_contig1070.691.1 ID=prot_F-serratus_M_contig1070.691.1|Name=mRNA_F-serratus_M_contig1070.691.1|organism=Fucus serratus male|type=polypeptide|length=244bp MREKHGDYFGISVAGYPEGHPDRIKEVPGGLASLSEAEKGRCKIDKDDDGback to top mRNA from alignment at F-serratus_M_contig1070:12..10579+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1070.691.1 ID=mRNA_F-serratus_M_contig1070.691.1|Name=mRNA_F-serratus_M_contig1070.691.1|organism=Fucus serratus male|type=mRNA|length=10568bp|location=Sequence derived from alignment at F-serratus_M_contig1070:12..10579+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1070:12..10579+ >mRNA_F-serratus_M_contig1070.691.1 ID=mRNA_F-serratus_M_contig1070.691.1|Name=mRNA_F-serratus_M_contig1070.691.1|organism=Fucus serratus male|type=CDS|length=1464bp|location=Sequence derived from alignment at F-serratus_M_contig1070:12..10579+ (Fucus serratus male)back to top |