mRNA_F-serratus_M_contig1065.648.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1065.648.1 vs. uniprot
Match: A0A6H5KSM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM2_9PHAE) HSP 1 Score: 278 bits (711), Expect = 6.510e-88 Identity = 120/161 (74.53%), Postives = 140/161 (86.96%), Query Frame = 1 Query: 115 VSPQRQFIDEIKSNIKRSRKHENGRVRRISEFPYNDGWAHVPLPSLQKAGGLPSAEPFYLKRVFVWVPEYMWDDIEYIPCPHCGERGQPDGWNTDPRRVYLEEDVCYMIGFRYYCKRCAAANPTRKKEERTSTTFNAWDADVLARMDDFVSKEFPFVLTKK 597 +SPQ + I EIK NIK SRKHENG+V+RISEFPY DGWA PLPSLQ++ G+PS EPFYLK+VFVWVPEY+W++I+ IPCPHCGERGQPDGWNTD RRV+LE+DVCY+IG+RYYCKRC AN + E+RT+ TF AWD DVLARMDDFVSKEFPFVLT+K Sbjct: 2 LSPQNRSIYEIKGNIKASRKHENGKVKRISEFPYRDGWASPPLPSLQQSAGIPSVEPFYLKKVFVWVPEYIWNEIDCIPCPHCGERGQPDGWNTDARRVFLEQDVCYLIGYRYYCKRCTDANAMKNSEDRTTATFKAWDPDVLARMDDFVSKEFPFVLTRK 162
BLAST of mRNA_F-serratus_M_contig1065.648.1 vs. uniprot
Match: A0A6H5K4D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4D4_9PHAE) HSP 1 Score: 238 bits (607), Expect = 5.330e-69 Identity = 108/164 (65.85%), Postives = 128/164 (78.05%), Query Frame = 1 Query: 115 VSPQRQFIDEIKSNIKRSRKHENGRVRRISEFPYNDGWAHVPLPSLQKAGGLPSAEPFYLKRVFVWVPEYMWDDIEYIPCPHCGERGQPDG--WNTDPRRVYLEEDVCYMIGFRYYCKRCAAANPT-RKKEERTSTTFNAWDADVLARMDDFVSKEFPFVLTKK 597 V PQ FI+++K N++ RKHENG V+R FPYN GWA+ PLPSL G P EPFYLK+V VWVPEY+W+D+ +IPCPHCG R QPDG WNT+PRRV+LE+DVCYMIGFRY CK C AN R ++ERT+ TFNAWD VLARMDDFVS++FPFVLTKK Sbjct: 124 VPPQSAFIEQMKDNLRACRKHENGAVKRKGAFPYNGGWANPPLPSLYTGLGAPPLEPFYLKKVLVWVPEYIWEDV-HIPCPHCGARAQPDGDGWNTEPRRVFLEDDVCYMIGFRYECKECTRANKEDRSEDERTTQTFNAWDPAVLARMDDFVSEQFPFVLTKK 286
BLAST of mRNA_F-serratus_M_contig1065.648.1 vs. uniprot
Match: D7FIV2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV2_ECTSI) HSP 1 Score: 229 bits (583), Expect = 7.580e-65 Identity = 97/136 (71.32%), Postives = 112/136 (82.35%), Query Frame = 1 Query: 190 VRRISEFPYNDGWAHVPLPSLQKAGGLPSAEPFYLKRVFVWVPEYMWDDIEYIPCPHCGERGQPDGWNTDPRRVYLEEDVCYMIGFRYYCKRCAAANPTRKKEERTSTTFNAWDADVLARMDDFVSKEFPFVLTKK 597 +R EFPYN GWAH LPSL + GLP PFYLK+VFVWVPEY+WD+IEYIPCPHC +R QPDGWNT+PRRV+LE+DVCY+IG+RY CK C AN R ++ERT+ TFNAWDA VLA MDD+VSKEFPFVLTKK Sbjct: 1 MRITPEFPYNGGWAHPRLPSLHRGAGLPPLGPFYLKKVFVWVPEYLWDEIEYIPCPHCNKRAQPDGWNTEPRRVFLEDDVCYLIGYRYLCKGCTEANKGRPEDERTTQTFNAWDAGVLATMDDYVSKEFPFVLTKK 136
BLAST of mRNA_F-serratus_M_contig1065.648.1 vs. uniprot
Match: A0A6H5JE51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE51_9PHAE) HSP 1 Score: 177 bits (450), Expect = 1.840e-52 Identity = 72/97 (74.23%), Postives = 84/97 (86.60%), Query Frame = 1 Query: 307 VWVPEYMWDDIEYIPCPHCGERGQPDGWNTDPRRVYLEEDVCYMIGFRYYCKRCAAANPTRKKEERTSTTFNAWDADVLARMDDFVSKEFPFVLTKK 597 +WVPEYMWD+I+ +PCP CGERGQPDGWNTD RRV+LE+DVCY IG+RYYCKRC AN + E+RT+ TFNAWD DVL RM+DFVSKEFPFVLT+K Sbjct: 1 MWVPEYMWDEIDCVPCPRCGERGQPDGWNTDARRVFLEQDVCYFIGYRYYCKRCTDANAMKNNEDRTTVTFNAWDPDVLGRMNDFVSKEFPFVLTRK 97
BLAST of mRNA_F-serratus_M_contig1065.648.1 vs. uniprot
Match: A0A6H5JXN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN0_9PHAE) HSP 1 Score: 164 bits (415), Expect = 2.460e-43 Identity = 72/164 (43.90%), Postives = 107/164 (65.24%), Query Frame = 1 Query: 109 SKVSPQRQFIDEIKSNIKRSRKHENGRVRRISEFPYNDGWAHVPLPSLQKAGGLPSAEPFYLKRVFVWVPEYMWDDIEYIPCPHCGERGQPDGWNTD-PRRVYLEEDVCYMIGFRYYCKRCAAANPTRKKEERTSTTFNAWDADVLARMDDFVSKEFPFVLTKK 597 S S Q +F +E+K I RS HE G V+ FP+++ + Q + LP + FY K V VW+PE+++ +++ +PCP CG +G PDGWN PRRV++E DV Y++GFRY C +CA N +++ E+ T+FNAWDA L R+ +++SKEFPF+LTK+ Sbjct: 104 STSSAQERFFEEVKDKIDRSITHEGGGVK--GRFPFDNPLVRPKCATFQPSPDLPKLDRFYQKAVLVWIPEFLFPELQAVPCPGCGGKGAPDGWNPKGPRRVFMEHDVAYVMGFRYKCAKCAEFNKGKQEAEKRKTSFNAWDAGCLRRLPEYISKEFPFLLTKR 265
BLAST of mRNA_F-serratus_M_contig1065.648.1 vs. uniprot
Match: A0A6H5L7G9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7G9_9PHAE) HSP 1 Score: 160 bits (405), Expect = 1.250e-42 Identity = 68/159 (42.77%), Postives = 105/159 (66.04%), Query Frame = 1 Query: 124 QRQFIDEIKSNIKRSRKHENGRVRRISEFPYNDGWAHVPLPSLQKAGGLPSAEPFYLKRVFVWVPEYMWDDIEYIPCPHCGERGQPDGWNTD-PRRVYLEEDVCYMIGFRYYCKRCAAANPTRKKEERTSTTFNAWDADVLARMDDFVSKEFPFVLTKK 597 Q +F +E+K I +S HE G V+ FP+++ + Q + LP + FY K V VW+PE+++ +++ +PCP CG +G PDGWN PRRV+++ DV Y++GFRY C +CA N +++ E+ T+FNAWDA L R+ +++SKEFPF+LTK+ Sbjct: 45 QERFFEEVKDKIDQSITHEGGGVK--GRFPFDNPLVRPKCATFQPSPDLPKLDRFYQKAVLVWIPEFLFPELQAVPCPGCGGKGAPDGWNPQGPRRVFMDHDVAYVMGFRYKCAKCAEFNKGKQEAEKRKTSFNAWDAGCLRRLPEYISKEFPFLLTKR 201
BLAST of mRNA_F-serratus_M_contig1065.648.1 vs. uniprot
Match: A0A6H5JPP4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPP4_9PHAE) HSP 1 Score: 160 bits (404), Expect = 2.770e-42 Identity = 69/159 (43.40%), Postives = 104/159 (65.41%), Query Frame = 1 Query: 124 QRQFIDEIKSNIKRSRKHENGRVRRISEFPYNDGWAHVPLPSLQKAGGLPSAEPFYLKRVFVWVPEYMWDDIEYIPCPHCGERGQPDGWNTD-PRRVYLEEDVCYMIGFRYYCKRCAAANPTRKKEERTSTTFNAWDADVLARMDDFVSKEFPFVLTKK 597 Q +F +E+K I RS HE G V+ FP+++ + Q + LP + FY K V VW+PE+++ +++ +PCP CG +G PDGWN PRRV++E DV Y++GFRY C +CA N +++ E+ T+FNAW A L R+ +++SKEFPF+LTK+ Sbjct: 45 QERFFEEVKDKIDRSITHEGGGVK--GRFPFDNPLVRPKCATFQPSPDLPKLDRFYQKAVLVWIPEFLFPELQAVPCPGCGGKGAPDGWNPKGPRRVFMEHDVAYVMGFRYKCAKCAEFNKGKQEAEKRKTSFNAWGAGCLRRLPEYISKEFPFLLTKR 201
BLAST of mRNA_F-serratus_M_contig1065.648.1 vs. uniprot
Match: A0A6H5JQG2_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQG2_9PHAE) HSP 1 Score: 159 bits (402), Expect = 4.390e-40 Identity = 70/164 (42.68%), Postives = 106/164 (64.63%), Query Frame = 1 Query: 109 SKVSPQRQFIDEIKSNIKRSRKHENGRVRRISEFPYNDGWAHVPLPSLQKAGGLPSAEPFYLKRVFVWVPEYMWDDIEYIPCPHCGERGQPDGWNTD-PRRVYLEEDVCYMIGFRYYCKRCAAANPTRKKEERTSTTFNAWDADVLARMDDFVSKEFPFVLTKK 597 S S Q +F ++K I +S HE G V+ FP+++ + Q + GLP + FY K V VW+PE+++ +++ +PCP CG +G PDGWN PRRV++E DV Y++GFRY C +CA N +++ E+ T+FNAWDA L R+ +++SKEFP +LTK+ Sbjct: 40 STSSAQERFFQDVKVKIDQSITHEGGGVK--GRFPFDNPLVRPKCATFQPSPGLPEVDWFYQKAVLVWIPEFLFPELQAVPCPGCGGKGAPDGWNPKGPRRVFMEHDVAYIMGFRYKCAKCAKFNQGKEEAEKRKTSFNAWDAGCLQRLPEYISKEFPSLLTKR 201
BLAST of mRNA_F-serratus_M_contig1065.648.1 vs. uniprot
Match: A0A6H5L0E3_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0E3_9PHAE) HSP 1 Score: 147 bits (372), Expect = 1.000e-36 Identity = 64/162 (39.51%), Postives = 99/162 (61.11%), Query Frame = 1 Query: 124 QRQFIDEIKSNIKRSRKHENGRVRRISEFPYNDGWAHVPLPSLQKAGGLPSAEPFYLKRVFVWVPEYMWDDIEYIPCPHCGERGQPDGWNTD-PRRVYLEEDVCYMIGFRYYCKRCAAANPTRKKEERTSTTFNAWDADVLARMDDFVSKEFPFVLTKKLLY 606 Q +F +E+K I RS HE G V+ FP+++ + Q + LP + FY K V VW+PE+++ +++ +PCP CG +G PDGWN PRRV++E DV Y++GFRY C +CA N +++ E+ T+FNAWDA R+ +++S FV + + Y Sbjct: 45 QERFFEEVKDKIDRSITHEGGGVK--GRFPFDNPLVRPKCATFQPSPDLPKLDRFYQKAVLVWIPEFLFPELQAVPCPGCGGKGAPDGWNPKGPRRVFMEHDVAYVMGFRYKCAKCAEFNKGKQEAEKRKTSFNAWDAGCFRRLPEYISXSHVFVASDEFWY 204
BLAST of mRNA_F-serratus_M_contig1065.648.1 vs. uniprot
Match: A0A6H5KNK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNK9_9PHAE) HSP 1 Score: 139 bits (351), Expect = 1.920e-36 Identity = 57/120 (47.50%), Postives = 84/120 (70.00%), Query Frame = 1 Query: 241 LPSLQKAGGLPSAEPFYLKRVFVWVPEYMWDDIEYIPCPHCGERGQPDGWNTD-PRRVYLEEDVCYMIGFRYYCKRCAAANPTRKKEERTSTTFNAWDADVLARMDDFVSKEFPFVLTKK 597 LP + LP + FY K V VW+PE+++ +++ +PCP CG +G PDGWN PRRV++E DV Y++GFRY C +CA N +++ E+ T+FNAWDA L R+ +++SKEF F+LTK+ Sbjct: 8 LPHIYARPNLPKLDRFYQKAVLVWIPEFLFPELQAVPCPGCGGKGAPDGWNPKGPRRVFMEHDVAYVMGFRYKCAKCAEFNEGKQEAEKRKTSFNAWDAGCLRRLPEYMSKEFHFLLTKR 127 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1065.648.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1065.648.1 >prot_F-serratus_M_contig1065.648.1 ID=prot_F-serratus_M_contig1065.648.1|Name=mRNA_F-serratus_M_contig1065.648.1|organism=Fucus serratus male|type=polypeptide|length=99bp MWDDIEYIPCPHCGERGQPDGWNTDPRRVYLEEDVCYMIGFRYYCKRCAAback to top mRNA from alignment at F-serratus_M_contig1065:16140..17449+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1065.648.1 ID=mRNA_F-serratus_M_contig1065.648.1|Name=mRNA_F-serratus_M_contig1065.648.1|organism=Fucus serratus male|type=mRNA|length=1310bp|location=Sequence derived from alignment at F-serratus_M_contig1065:16140..17449+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1065:16140..17449+ >mRNA_F-serratus_M_contig1065.648.1 ID=mRNA_F-serratus_M_contig1065.648.1|Name=mRNA_F-serratus_M_contig1065.648.1|organism=Fucus serratus male|type=CDS|length=594bp|location=Sequence derived from alignment at F-serratus_M_contig1065:16140..17449+ (Fucus serratus male)back to top |