mRNA_F-serratus_M_contig1064.644.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1064.644.1 vs. uniprot
Match: A0A6H5LCY1_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCY1_9PHAE) HSP 1 Score: 150 bits (379), Expect = 5.540e-43 Identity = 83/128 (64.84%), Postives = 96/128 (75.00%), Query Frame = 1 Query: 1 MPSFDIEGTPVVFPFKPYDCQLTYIRGVVTALNESKNALLESPTGTGKTLCLLCASLAWQQKNASAMESQPPPPPATELAY-EQTVTDLSRPR---QPQQNRTAGVSGRPALPSVVIYASRTHSQLSQ 372 MP+ +I GT V FPF PYDCQL YI GV+ ALN SKNALLESPTGTGKTLCLL ASLAWQQ+N++ + S+P P T+LAY E+ VTDLSRPR QP Q + A+PSV+IYASRTHSQL Q Sbjct: 1 MPTLEIGGTSVAFPFNPYDCQLEYIGGVLEALNGSKNALLESPTGTGKTLCLLTASLAWQQRNSAMVASKPAP---TQLAYDERPVTDLSRPRHEQQPYQENKPTTAA--AMPSVIIYASRTHSQLGQ 123
BLAST of mRNA_F-serratus_M_contig1064.644.1 vs. uniprot
Match: A0A2H1BVS3_FASHE (Helicase ATP-binding domain-containing protein n=1 Tax=Fasciola hepatica TaxID=6192 RepID=A0A2H1BVS3_FASHE) HSP 1 Score: 103 bits (257), Expect = 5.770e-26 Identity = 58/125 (46.40%), Postives = 77/125 (61.60%), Query Frame = 1 Query: 1 MPSFDIEGTPVVFPFKPYDCQLTYIRGVVTALNESKNALLESPTGTGKTLCLLCASLAWQQKNASAMESQPPPPPATELAYEQTVTDLSRPRQPQQNRTAGVSGRPALPSVVIYASRTHSQLSQA 375 MP+ +I G + FP +PY CQ+ Y++ ++TALN S+NA+LESPTGTGKTLCLLC SLAW +S + + P T+ E T+L RP L + VI+ASRTHSQL+QA Sbjct: 1 MPTVNISGVGIEFPHEPYPCQVEYMKELLTALNNSQNAILESPTGTGKTLCLLCTSLAWISSISSGVSLRNPSRRETDPFVEVETTEL----------------RPPL-AKVIFASRTHSQLAQA 108
BLAST of mRNA_F-serratus_M_contig1064.644.1 vs. uniprot
Match: A0A183JF72_9TREM (Helicase ATP-binding domain-containing protein n=1 Tax=Schistosoma curassoni TaxID=6186 RepID=A0A183JF72_9TREM) HSP 1 Score: 105 bits (261), Expect = 1.570e-25 Identity = 60/133 (45.11%), Postives = 84/133 (63.16%), Query Frame = 1 Query: 1 MPSFDIEGTPVVFPFKPYDCQLTYIRGVVTALNESKNALLESPTGTGKTLCLLCASLAWQQKNASAMESQPPPPPATELAYEQTVTDLSRPRQPQQNRTAGVSGRPALPSV--------VIYASRTHSQLSQA 375 MP I+G + FP++PYDCQ+ Y+ V+ +LNE K+A+LESPTGTGKTLCLLCASLAW K A++++S T ++ T+ RP + T +S + L S+ +I+ASRTHSQL+QA Sbjct: 1 MPQIAIDGVEIDFPYQPYDCQIEYMTKVLLSLNEGKHAILESPTGTGKTLCLLCASLAWLNKQANSVQS------ITNAKHQNTMG--KRPTSDNVDNT--LSHQNFLASLGKVNNGCKIIFASRTHSQLAQA 123
BLAST of mRNA_F-serratus_M_contig1064.644.1 vs. uniprot
Match: A0A183RL02_9TREM (Helicase ATP-binding domain-containing protein n=2 Tax=Schistosoma TaxID=6181 RepID=A0A183RL02_9TREM) HSP 1 Score: 105 bits (261), Expect = 1.680e-25 Identity = 60/133 (45.11%), Postives = 82/133 (61.65%), Query Frame = 1 Query: 1 MPSFDIEGTPVVFPFKPYDCQLTYIRGVVTALNESKNALLESPTGTGKTLCLLCASLAWQQKNASAMESQPPPPPATELAYEQTVTDLSRPRQPQQNRTAGVSGRPALPSV--------VIYASRTHSQLSQA 375 MP I+G + FP++PYDCQ Y+ V+ +LNE K+A+LESPTGTGKTLCLLCASLAW K A++++ AT+ ++ T+ R N +S + L S+ +IYASRTHSQL+QA Sbjct: 1 MPHIAIDGVEIDFPYQPYDCQFEYMTKVLLSLNEGKHAILESPTGTGKTLCLLCASLAWLDKQANSVQLIS----ATDTKHQNTMGK----RPTSDNVDNALSHQNFLASLGKVNNGCKIIYASRTHSQLAQA 125
BLAST of mRNA_F-serratus_M_contig1064.644.1 vs. uniprot
Match: A0A3R6XJV3_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6XJV3_9STRA) HSP 1 Score: 104 bits (259), Expect = 4.040e-25 Identity = 60/124 (48.39%), Postives = 76/124 (61.29%), Query Frame = 1 Query: 1 MPSFDIEGTPVVFPFKPYDCQLTYIRGVVTALNESKNALLESPTGTGKTLCLLCASLAWQQKNASAMESQPPPPPATELAYEQTVTDLSRPRQPQQNRTAGVSGRPALPSVVIYASRTHSQLSQ 372 MP+ I G PV FPF PYD Q+ Y+ V+ +L +NALLESPTGTGKTLCLLCA+LAW+ + + P ++ YE T S+P N GV+ + LP + IYASRTHSQL Q Sbjct: 1 MPTLQIGGIPVSFPFTPYDSQVVYMEKVIQSLEFKQNALLESPTGTGKTLCLLCATLAWRLHRLKQLRAASNKP---KVQYETTT---SKPDDTDDNDDQGVADK--LPKI-IYASRTHSQLKQ 115
BLAST of mRNA_F-serratus_M_contig1064.644.1 vs. uniprot
Match: A0A6A4Z8D8_9STRA (Helicase ATP-binding domain-containing protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z8D8_9STRA) HSP 1 Score: 105 bits (262), Expect = 9.350e-25 Identity = 61/124 (49.19%), Postives = 76/124 (61.29%), Query Frame = 1 Query: 1 MPSFDIEGTPVVFPFKPYDCQLTYIRGVVTALNESKNALLESPTGTGKTLCLLCASLAWQQKNASAMESQPPPPPATELAYEQTVTDLSRPRQPQQNRTAGVSGRPALPSVVIYASRTHSQLSQ 372 MP+ I G PV FPF PYD Q+ Y+ V+ +L +NALLESPTGTGKTLCLLCA+LAW+ + + P ++ YE T SRP N GV+ + LP + IYASRTHSQL Q Sbjct: 1 MPTLQIGGIPVSFPFTPYDSQVVYMEKVIQSLEFKQNALLESPTGTGKTLCLLCATLAWRLHRLKQLRAASNKP---KVQYETTT---SRPDDTDDNDDQGVADK--LPKI-IYASRTHSQLKQ 115
BLAST of mRNA_F-serratus_M_contig1064.644.1 vs. uniprot
Match: A0A8J9RSI3_9CHLO (Regulator of telomere elongation helicase 1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RSI3_9CHLO) HSP 1 Score: 107 bits (267), Expect = 2.250e-24 Identity = 59/128 (46.09%), Postives = 80/128 (62.50%), Query Frame = 1 Query: 1 MPSFDIEGTPVVFPFKPYDCQLTYIRGVVTALNESKNALLESPTGTGKTLCLLCASLAWQQKNASAMESQPPPPPATELAYEQTVTDLSRPRQPQQNRTAGV----SGRPALPSVVIYASRTHSQLSQ 372 MP++ + G V FP + Y+CQ+TY+ V+TAL E KNALLESPTGTGKTLCLLCA+LAWQ+ + A ++ A++ +E V + Q G+ S P+ +IYASRTHSQL+Q Sbjct: 1 MPTYTLRGIEVQFPHEAYECQVTYMEKVITALQEGKNALLESPTGTGKTLCLLCATLAWQE-SLKAAKAAAAAQAASKTCFEGEVEPGHSNKSWAQMTAEGLASLHSSEPSAIPTIIYASRTHSQLAQ 127
BLAST of mRNA_F-serratus_M_contig1064.644.1 vs. uniprot
Match: D8RJV6_SELML (DNA helicase (Fragment) n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RJV6_SELML) HSP 1 Score: 105 bits (262), Expect = 1.020e-23 Identity = 59/124 (47.58%), Postives = 75/124 (60.48%), Query Frame = 1 Query: 1 MPSFDIEGTPVVFPFKPYDCQLTYIRGVVTALNESKNALLESPTGTGKTLCLLCASLAWQQKNASAMESQPPPPPATELAYEQTVTDLSRPRQPQQNRTAGVSGRPALPSVVIYASRTHSQLSQ 372 MPS+ ++G V FP+ YDCQL Y+ V+ AL + +NALLESPTGTGKTLCLLCA+LAW+ ES PP ++ +DL + N+ LP+V IYASRTHSQL Q Sbjct: 2 MPSYKLKGVDVRFPYDAYDCQLVYMESVIAALQKGQNALLESPTGTGKTLCLLCATLAWR-------ESLAPPDRGRRMSASSQSSDLDPTSSQEANK---------LPTV-IYASRTHSQLQQ 108
BLAST of mRNA_F-serratus_M_contig1064.644.1 vs. uniprot
Match: W4GAD9_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GAD9_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.040e-23 Identity = 61/124 (49.19%), Postives = 76/124 (61.29%), Query Frame = 1 Query: 1 MPSFDIEGTPVVFPFKPYDCQLTYIRGVVTALNESKNALLESPTGTGKTLCLLCASLAWQQKNASAMESQPPPPPATELAYEQTVTDLSRPRQPQQNRTAGVSGRPALPSVVIYASRTHSQLSQ 372 MP+ I G PV FPF PYD Q+ Y+ V+ +L +NALLESPTGTGKTLCLLCA+LAW+ + + P ++ YE T SRP N GV+ + LP + IYASRTHSQL Q Sbjct: 1 MPTLQIGGIPVSFPFTPYDSQVVYMEKVIQSLEFKQNALLESPTGTGKTLCLLCATLAWRLHRLKQLRAASNKP---KVQYETTT---SRPDDTDDNDDQGVADK--LPKI-IYASRTHSQLKQ 115
BLAST of mRNA_F-serratus_M_contig1064.644.1 vs. uniprot
Match: UPI00022DC59C (putative regulator of telomere elongation helicase 1 rtel1 n=1 Tax=Schistosoma mansoni TaxID=6183 RepID=UPI00022DC59C) HSP 1 Score: 105 bits (262), Expect = 1.060e-23 Identity = 60/133 (45.11%), Postives = 82/133 (61.65%), Query Frame = 1 Query: 1 MPSFDIEGTPVVFPFKPYDCQLTYIRGVVTALNESKNALLESPTGTGKTLCLLCASLAWQQKNASAMESQPPPPPATELAYEQTVTDLSRPRQPQQNRTAGVSGRPALPSV--------VIYASRTHSQLSQA 375 MP I+G + FP++PYDCQ Y+ V+ +LNE K+A+LESPTGTGKTLCLLCASLAW K A++++ AT+ ++ T+ R N +S + L S+ +IYASRTHSQL+QA Sbjct: 1 MPQIAIDGVEIDFPYQPYDCQFEYMTKVLLSLNEGKHAILESPTGTGKTLCLLCASLAWLDKQANSVQLIS----ATDAKHQNTMGK----RPTSDNVDNALSHQNFLASLGKVNNGCKIIYASRTHSQLAQA 125 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1064.644.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1064.644.1 >prot_F-serratus_M_contig1064.644.1 ID=prot_F-serratus_M_contig1064.644.1|Name=mRNA_F-serratus_M_contig1064.644.1|organism=Fucus serratus male|type=polypeptide|length=137bp MPSFDIEGTPVVFPFKPYDCQLTYIRGVVTALNESKNALLESPTGTGKTLback to top mRNA from alignment at F-serratus_M_contig1064:279788..281603+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1064.644.1 ID=mRNA_F-serratus_M_contig1064.644.1|Name=mRNA_F-serratus_M_contig1064.644.1|organism=Fucus serratus male|type=mRNA|length=1816bp|location=Sequence derived from alignment at F-serratus_M_contig1064:279788..281603+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1064:279788..281603+ >mRNA_F-serratus_M_contig1064.644.1 ID=mRNA_F-serratus_M_contig1064.644.1|Name=mRNA_F-serratus_M_contig1064.644.1|organism=Fucus serratus male|type=CDS|length=822bp|location=Sequence derived from alignment at F-serratus_M_contig1064:279788..281603+ (Fucus serratus male)back to top |