prot_F-serratus_M_contig1063.623.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1063.623.1
Unique Nameprot_F-serratus_M_contig1063.623.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length83
Homology
BLAST of mRNA_F-serratus_M_contig1063.623.1 vs. uniprot
Match: D7G312_ECTSI (50S ribosomal protein L28 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G312_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 1.380e-38
Identity = 66/82 (80.49%), Postives = 75/82 (91.46%), Query Frame = 0
Query:    1 MRSRQCDLLGKTPNRKARVVTFSHKRIHKVQHVNLQKRRLFWEEGNRWVRLRLSTKGIKTIDKYGLHGAAKKFGLNLVKFSA 82
            MR+R CDLLGK PNRKARVVTFSHKRIHKVQH+NLQ R+++WEEG R+VRLRLSTK IKTIDKYGL+ AAKKF L+LVKF+A
Sbjct:   48 MRARNCDLLGKKPNRKARVVTFSHKRIHKVQHLNLQWRKMYWEEGKRFVRLRLSTKAIKTIDKYGLNKAAKKFNLDLVKFTA 129          
BLAST of mRNA_F-serratus_M_contig1063.623.1 vs. uniprot
Match: A0A7R9U9Q4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9Q4_9STRA)

HSP 1 Score: 108 bits (270), Expect = 4.670e-28
Identity = 54/80 (67.50%), Postives = 65/80 (81.25%), Query Frame = 0
Query:    1 MRSRQCDLLGKTPNRKARVVTFSHKRIHKVQHVNLQKRRLFWEEGNRWVRLRLSTKGIKTIDKYGLHGAAKKFGLNLVKF 80
            MR+R CDL GK PNR A VVTFSHKR   VQ+VNLQ RR +WEEG+R+VR+R+STK IKTI KYGL  +AKK+G++L KF
Sbjct:  104 MRARNCDLTGKRPNRDAMVVTFSHKRNKTVQYVNLQNRRFWWEEGSRYVRMRVSTKAIKTIKKYGLEESAKKYGVDLSKF 183          
BLAST of mRNA_F-serratus_M_contig1063.623.1 vs. uniprot
Match: A0A1Z5K4G8_FISSO (Large subunit ribosomal protein L28 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K4G8_FISSO)

HSP 1 Score: 106 bits (265), Expect = 5.000e-28
Identity = 60/81 (74.07%), Postives = 67/81 (82.72%), Query Frame = 0
Query:    1 MRSRQCDLLGKTPNRKARVVTFSHKRIHKVQHVNLQKRRLFWEEGNRWVRLRLSTKGIKTIDKYG-LHGAAKKFGLNLVKF 80
            MR+R CDLLGKTPNR+ARVVTFSHKR  KVQ VNLQ +R F EE NR VRLRLSTKGIKT++KYG +  AAKKF L+L KF
Sbjct:   42 MRARVCDLLGKTPNRQARVVTFSHKRNKKVQEVNLQWKRFFSEELNRNVRLRLSTKGIKTVNKYGSIDKAAKKFELDLAKF 122          
BLAST of mRNA_F-serratus_M_contig1063.623.1 vs. uniprot
Match: A0A7S2REE2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2REE2_9STRA)

HSP 1 Score: 105 bits (261), Expect = 1.400e-27
Identity = 57/81 (70.37%), Postives = 66/81 (81.48%), Query Frame = 0
Query:    1 MRSRQCDLLGKTPNRKARVVTFSHKRIHKVQHVNLQKRRLFWEEGNRWVRLRLSTKGIKTIDKYG-LHGAAKKFGLNLVKF 80
            MR R CDLLGK  NRKARVVTFSHKRIHKVQ VNLQ +R + ++  R VR+RLSTKGIKT++KYG +  AAKKFGL+L KF
Sbjct:   29 MRERACDLLGKKANRKARVVTFSHKRIHKVQAVNLQWKRFYSDDLGRNVRVRLSTKGIKTVNKYGSIDAAAKKFGLDLTKF 109          
BLAST of mRNA_F-serratus_M_contig1063.623.1 vs. uniprot
Match: A0A7S2RVK4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RVK4_9STRA)

HSP 1 Score: 106 bits (264), Expect = 1.740e-27
Identity = 51/80 (63.75%), Postives = 66/80 (82.50%), Query Frame = 0
Query:    1 MRSRQCDLLGKTPNRKARVVTFSHKRIHKVQHVNLQKRRLFWEEGNRWVRLRLSTKGIKTIDKYGLHGAAKKFGLNLVKF 80
            MR+R CDL GK PNR+A  VTFSHKR  KVQ VNLQK++L+W EG+R+V LR+STKG++T++KYG+  AAKK+GL+L  F
Sbjct:   75 MRARFCDLTGKRPNRQAMAVTFSHKRNKKVQAVNLQKKKLWWPEGDRYVTLRISTKGLRTVEKYGIDKAAKKYGLDLASF 154          
BLAST of mRNA_F-serratus_M_contig1063.623.1 vs. uniprot
Match: A0A7S1E3X3_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E3X3_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.950e-27
Identity = 56/81 (69.14%), Postives = 67/81 (82.72%), Query Frame = 0
Query:    1 MRSRQCDLLGKTPNRKARVVTFSHKRIHKVQHVNLQKRRLFWEEGNRWVRLRLSTKGIKTIDKY-GLHGAAKKFGLNLVKF 80
            MR+R CDL GK PNR+ARVVTFSHKRI KVQHVNLQK++ + EE  R V+LR+STKGIKT+ KY G+  AAKKFG++L KF
Sbjct:   53 MRARICDLTGKRPNRQARVVTFSHKRIKKVQHVNLQKKKFYSEELGRNVKLRISTKGIKTVTKYNGIDAAAKKFGVDLSKF 133          
BLAST of mRNA_F-serratus_M_contig1063.623.1 vs. uniprot
Match: B5YNJ8_THAPS (RK28, ribosomal protein 28, 50S large ribosomal subunit, chloroplast (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNJ8_THAPS)

HSP 1 Score: 103 bits (256), Expect = 3.250e-27
Identity = 55/77 (71.43%), Postives = 64/77 (83.12%), Query Frame = 0
Query:    4 RQCDLLGKTPNRKARVVTFSHKRIHKVQHVNLQKRRLFWEEGNRWVRLRLSTKGIKTIDKYG-LHGAAKKFGLNLVK 79
            R CDLLGKT NRKARVVTFSHKRIHKVQ VNLQ +R + ++  R VRLRLSTKGIKT++KYG +  AAKKFG++L K
Sbjct:    1 RACDLLGKTANRKARVVTFSHKRIHKVQQVNLQWKRFYSDDLGRQVRLRLSTKGIKTVNKYGSIDAAAKKFGVDLAK 77          
BLAST of mRNA_F-serratus_M_contig1063.623.1 vs. uniprot
Match: A0A448ZBR3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZBR3_9STRA)

HSP 1 Score: 104 bits (259), Expect = 4.200e-27
Identity = 57/81 (70.37%), Postives = 67/81 (82.72%), Query Frame = 0
Query:    1 MRSRQCDLLGKTPNRKARVVTFSHKRIHKVQHVNLQKRRLFWEEGNRWVRLRLSTKGIKTIDKYG-LHGAAKKFGLNLVKF 80
            MR+R+CDLLGK  NRKARVVTFSHKRIHKVQ VNLQ +R F EE +R V+LRLSTKGIKT++K G +  AAKKF ++L KF
Sbjct:   43 MRARECDLLGKKANRKARVVTFSHKRIHKVQEVNLQTKRFFSEELDRKVKLRLSTKGIKTVNKLGGIDAAAKKFKVDLKKF 123          
BLAST of mRNA_F-serratus_M_contig1063.623.1 vs. uniprot
Match: A0A7S2A0S8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A0S8_TRICV)

HSP 1 Score: 103 bits (258), Expect = 1.410e-26
Identity = 55/81 (67.90%), Postives = 66/81 (81.48%), Query Frame = 0
Query:    1 MRSRQCDLLGKTPNRKARVVTFSHKRIHKVQHVNLQKRRLFWEEGNRWVRLRLSTKGIKTIDKYG-LHGAAKKFGLNLVKF 80
            MR+R CDLLGK PNR+ARVVTFSHKR  KVQHVNLQ ++ + ++  R V+LRLSTKGIKT+DKYG +  AA+KFGL L KF
Sbjct:   74 MRARVCDLLGKKPNRQARVVTFSHKRNKKVQHVNLQVKKFYSDDLGRTVKLRLSTKGIKTVDKYGGIDAAARKFGLELSKF 154          
BLAST of mRNA_F-serratus_M_contig1063.623.1 vs. uniprot
Match: A0A6U3T0T0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3T0T0_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.690e-26
Identity = 58/81 (71.60%), Postives = 66/81 (81.48%), Query Frame = 0
Query:    1 MRSRQCDLLGKTPNRKARVVTFSHKRIHKVQHVNLQKRRLFWEEGNRWVRLRLSTKGIKTIDKYG-LHGAAKKFGLNLVKF 80
            MR+R CDLLGK  NRKARVVTFSHKRIHKVQ VNLQ +R   +E  R VRLRLSTKGIKT++KYG +  AA+KFGL+L KF
Sbjct:   94 MRTRVCDLLGKKANRKARVVTFSHKRIHKVQEVNLQWKRYQSDELGRTVRLRLSTKGIKTVNKYGSIDAAARKFGLDLSKF 174          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1063.623.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G312_ECTSI1.380e-3880.4950S ribosomal protein L28 n=2 Tax=Ectocarpus TaxID... [more]
A0A7R9U9Q4_9STRA4.670e-2867.50Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A1Z5K4G8_FISSO5.000e-2874.07Large subunit ribosomal protein L28 n=2 Tax=Fistul... [more]
A0A7S2REE2_9STRA1.400e-2770.37Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2RVK4_9STRA1.740e-2763.75Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1E3X3_9STRA1.950e-2769.14Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
B5YNJ8_THAPS3.250e-2771.43RK28, ribosomal protein 28, 50S large ribosomal su... [more]
A0A448ZBR3_9STRA4.200e-2770.37Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2A0S8_TRICV1.410e-2667.90Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A6U3T0T0_9STRA1.690e-2671.60Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037147Ribosomal protein L28/L24 superfamilyGENE3D2.30.170.40coord: 3..80
e-value: 2.8E-21
score: 77.3
IPR001383Ribosomal protein L28TIGRFAMTIGR00009TIGR00009coord: 3..60
e-value: 2.0E-13
score: 48.6
IPR026569Ribosomal protein L28/L24PFAMPF00830Ribosomal_L28coord: 4..63
e-value: 8.3E-17
score: 61.1
IPR026569Ribosomal protein L28/L24PANTHERPTHR1352839S RIBOSOMAL PROTEIN L28, MITOCHONDRIALcoord: 3..79
NoneNo IPR availablePANTHERPTHR13528:SF8coord: 3..79
IPR034704L28p-likeSUPERFAMILY143800L28p-likecoord: 3..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1063contigF-serratus_M_contig1063:85691..86210 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1063.623.1mRNA_F-serratus_M_contig1063.623.1Fucus serratus malemRNAF-serratus_M_contig1063 85576..90669 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1063.623.1 ID=prot_F-serratus_M_contig1063.623.1|Name=mRNA_F-serratus_M_contig1063.623.1|organism=Fucus serratus male|type=polypeptide|length=83bp
MRSRQCDLLGKTPNRKARVVTFSHKRIHKVQHVNLQKRRLFWEEGNRWVR
LRLSTKGIKTIDKYGLHGAAKKFGLNLVKFSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037147Ribo_L28/L24_sf
IPR001383Ribosomal_L28
IPR026569Ribo_L28/L24
IPR034704L28p-like