mRNA_F-serratus_M_contig106.595.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Match: A0A6H5JIX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIX8_9PHAE) HSP 1 Score: 179 bits (453), Expect = 2.780e-55 Identity = 80/95 (84.21%), Postives = 88/95 (92.63%), Query Frame = 1 Query: 31 GGALNVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHCVCSEVTDDFLEYTKAQGNDLSTPRNPYFPGLKPGDRWCLCSSRWLQAQRAGRAP 315 G LNVLG PL++CSLPGGPTTGWRRDG+CSTDD+DRGQHCVCSEVT +FL+YTKAQGNDLSTP P+FPGLK GDRWCLCSSRWLQAQRAG+AP Sbjct: 29 GSPLNVLGTPLKACSLPGGPTTGWRRDGYCSTDDNDRGQHCVCSEVTQEFLDYTKAQGNDLSTPL-PHFPGLKAGDRWCLCSSRWLQAQRAGKAP 122
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Match: D7FXT4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXT4_ECTSI) HSP 1 Score: 170 bits (431), Expect = 4.790e-52 Identity = 75/87 (86.21%), Postives = 83/87 (95.40%), Query Frame = 1 Query: 55 KPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHCVCSEVTDDFLEYTKAQGNDLSTPRNPYFPGLKPGDRWCLCSSRWLQAQRAGRAP 315 +PLQ+CSLPGGPTTGWRRDG+CSTDD+DRGQHCVCSEVT +FL+YTKAQGNDLSTP P+FPGLK GDRWCLCSSRWLQAQRAG+AP Sbjct: 29 QPLQACSLPGGPTTGWRRDGYCSTDDNDRGQHCVCSEVTQEFLDYTKAQGNDLSTPL-PHFPGLKAGDRWCLCSSRWLQAQRAGKAP 114
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Match: F6DAF3_THICA (Uncharacterized protein n=2 Tax=Thiomicrospira TaxID=933 RepID=F6DAF3_THICA) HSP 1 Score: 133 bits (335), Expect = 7.260e-38 Identity = 57/92 (61.96%), Postives = 76/92 (82.61%), Query Frame = 1 Query: 43 NVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHCVCSEVTDDFLEYTKAQGNDLSTPRNPYFPGLKPGDRWCLCSSRWLQAQRAGRAPR 318 N+LG+PLQ+CS P TG+ RDG C TD+HDRG+H VC+++T+ FL+++KAQGNDLSTP P+FPGLKPGD WCLC+ RW++A +AG AP+ Sbjct: 4 NLLGEPLQTCSHM--PLTGFYRDGLCRTDEHDRGRHVVCAQMTEHFLDFSKAQGNDLSTPIQPHFPGLKPGDFWCLCALRWIEAYQAGLAPK 93
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Match: A0A2E7AEX7_9BACT (Uncharacterized protein n=8 Tax=Verrucomicrobiaceae TaxID=203557 RepID=A0A2E7AEX7_9BACT) HSP 1 Score: 132 bits (333), Expect = 2.160e-37 Identity = 61/95 (64.21%), Postives = 72/95 (75.79%), Query Frame = 1 Query: 34 GALNVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHCVCSEVTDDFLEYTKAQGNDLSTPRNPY-FPGLKPGDRWCLCSSRWLQAQRAGRAP 315 GA NV G+PL C P TG+ RDGFC T HDRG H VC+++T+DFL YT+AQGNDLSTP Y FPGLKPGDRWCLC++RW +A+RAG AP Sbjct: 13 GAQNVFGEPLHQCCTS--PLTGFERDGFCHTGPHDRGVHVVCAQMTEDFLAYTRAQGNDLSTPAPMYGFPGLKPGDRWCLCAARWAEAERAGVAP 105
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Match: A0A6P8H973_ACTTE (uncharacterized protein LOC116286862 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8H973_ACTTE) HSP 1 Score: 131 bits (330), Expect = 9.960e-37 Identity = 58/92 (63.04%), Postives = 70/92 (76.09%), Query Frame = 1 Query: 43 NVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHCVCSEVTDDFLEYTKAQGNDLSTPRNPYFPGLKPGDRWCLCSSRWLQAQRAGRAPR 318 NV G PLQ CS P TGW RDG+C TD +D G H VC+ +T +FL+YTK +GNDLSTP NPYFPGL+PGD WCLC+ RW +AQ AG+AP+ Sbjct: 5 NVFGAPLQPCSTD--PMTGWYRDGYCKTDMNDHGVHTVCANMTREFLQYTKTKGNDLSTP-NPYFPGLRPGDSWCLCALRWKEAQEAGKAPK 93
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Match: A0A835YP74_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP74_9STRA) HSP 1 Score: 130 bits (326), Expect = 2.500e-36 Identity = 65/98 (66.33%), Postives = 72/98 (73.47%), Query Frame = 1 Query: 25 SGGGALNVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHCVCSEVTDDFLEYTKAQGNDLSTPRNPY-FPGLKPGDRWCLCSSRWLQAQRAGRAP 315 SG G LNVLG PL+ CS P TG+ R+GFC D DRG H VC+ +TDDFLEYTKAQGNDLSTPR + FPGLK GD WCLC+SRW QA AG AP Sbjct: 7 SGAGDLNVLGSPLKVCSTS--PMTGFYRNGFCQCDGADRGVHSVCAILTDDFLEYTKAQGNDLSTPRPEFGFPGLKAGDGWCLCASRWKQAADAGHAP 102
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Match: A0A2T2RGJ0_9CYAN (DUF2237 domain-containing protein n=1 Tax=Cyanobacteria bacterium SW_9_44_58 TaxID=1919144 RepID=A0A2T2RGJ0_9CYAN) HSP 1 Score: 129 bits (324), Expect = 4.080e-36 Identity = 61/94 (64.89%), Postives = 75/94 (79.79%), Query Frame = 1 Query: 37 ALNVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHCVCSEVTDDFLEYTKAQGNDLSTPRNPY-FPGLKPGDRWCLCSSRWLQAQRAGRAP 315 A NVLG+PLQ C PTTG+ RDG+C+T D G H VC+E+T++FLEYTK+QGNDLSTPR + FPGLKPGDRWCLC+SRW +A++AG AP Sbjct: 4 AKNVLGEPLQLCC--NNPTTGFYRDGYCNTGGQDFGLHVVCAEMTEEFLEYTKSQGNDLSTPRPMFDFPGLKPGDRWCLCASRWEEARQAGVAP 95
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Match: A0A6T9YYR6_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A6T9YYR6_9RHOD) HSP 1 Score: 130 bits (328), Expect = 4.280e-36 Identity = 61/91 (67.03%), Postives = 68/91 (74.73%), Query Frame = 1 Query: 43 NVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHCVCSEVTDDFLEYTKAQGNDLSTPRNPYFPGLKPGDRWCLCSSRWLQAQRAGRAP 315 NVLG PL CS P TGW RDGFC T+ D GQHCVC+ +T FL+YTK+QGNDLSTPR FPGLKPGD+WCLC+SRW QA AG AP Sbjct: 61 NVLGTPLSLCSSD--PLTGWNRDGFCCTEVADFGQHCVCASLTKSFLDYTKSQGNDLSTPRGS-FPGLKPGDKWCLCTSRWKQAHAAGCAP 148
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Match: UPI00200477EA (DUF2237 domain-containing protein n=1 Tax=Lysobacter sp. CAU 1642 TaxID=2933270 RepID=UPI00200477EA) HSP 1 Score: 127 bits (320), Expect = 1.420e-35 Identity = 60/95 (63.16%), Postives = 70/95 (73.68%), Query Frame = 1 Query: 37 ALNVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHCVCSEVTDDFLEYTKAQGNDLSTPRNPY-FPGLKPGDRWCLCSSRWLQAQRAGRAPR 318 ALNVLG PLQ CSL P TGW RDG C +D HD G H VC+ +T +FLE+++ GNDLSTPR + FPGLKPGDRWCLC+ RW +A AG APR Sbjct: 3 ALNVLGTPLQPCSLD--PLTGWFRDGCCRSDPHDAGMHWVCAVMTSEFLEFSRQAGNDLSTPRPEFAFPGLKPGDRWCLCARRWQEAYVAGAAPR 95
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Match: A0A368CLR9_9SYNE (DUF2237 domain-containing protein n=1 Tax=Synechococcus sp. MED-G71 TaxID=2267256 RepID=A0A368CLR9_9SYNE) HSP 1 Score: 128 bits (321), Expect = 1.620e-35 Identity = 59/93 (63.44%), Postives = 67/93 (72.04%), Query Frame = 1 Query: 40 LNVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHCVCSEVTDDFLEYTKAQGNDLSTPRNPY-FPGLKPGDRWCLCSSRWLQAQRAGRAP 315 LNVLG PLQ C P TGW RDGFC TDD DRG H VC V++ FL Y+KAQGNDLSTP + FPGLKPGD WC+C++RWL+A G AP Sbjct: 9 LNVLGTPLQRCGCE--PMTGWYRDGFCRTDDADRGSHTVCCVVSESFLSYSKAQGNDLSTPMPQFQFPGLKPGDHWCVCAARWLEAHADGMAP 99 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig106.595.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig106.595.1 >prot_F-serratus_M_contig106.595.1 ID=prot_F-serratus_M_contig106.595.1|Name=mRNA_F-serratus_M_contig106.595.1|organism=Fucus serratus male|type=polypeptide|length=132bp MSSSATTASGGGALNVLGKPLQSCSLPGGPTTGWRRDGFCSTDDHDRGQHback to top mRNA from alignment at F-serratus_M_contig106:648401..654335- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig106.595.1 ID=mRNA_F-serratus_M_contig106.595.1|Name=mRNA_F-serratus_M_contig106.595.1|organism=Fucus serratus male|type=mRNA|length=5935bp|location=Sequence derived from alignment at F-serratus_M_contig106:648401..654335- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig106:648401..654335- >mRNA_F-serratus_M_contig106.595.1 ID=mRNA_F-serratus_M_contig106.595.1|Name=mRNA_F-serratus_M_contig106.595.1|organism=Fucus serratus male|type=CDS|length=792bp|location=Sequence derived from alignment at F-serratus_M_contig106:648401..654335- (Fucus serratus male)back to top |