prot_F-serratus_M_contig996.21247.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig996.21247.1
Unique Nameprot_F-serratus_M_contig996.21247.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length198
Homology
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BLAST of mRNA_F-serratus_M_contig996.21247.1 vs. uniprot
Match: D7G0J2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J2_ECTSI)

HSP 1 Score: 295 bits (754), Expect = 1.470e-93
Identity = 144/198 (72.73%), Postives = 158/198 (79.80%), Query Frame = 0 
Query:    1 MDRVRRVWKQRYPSWSNQEIAADMRAKLSSHLLKHVPRIVPRPEILLPRYDNVIETFKVVRDGATGDTLFTDRMHKAAALLRVHIDKGCLSDPNPDLVPLLQITGRTKDGLDLIRXXXXXXXXXXXXXXXXXXXXXXXASAIMAHYTMLLHNYRWNHRMAGLHRGMDPDLLGYYSHWEVEDIQAITKGWYDDVPLYPG 198
            MD VR VWK R PSW++QEIA+DMRAK +SHLLKHVPRIVP P+ILLPR+DN++ETFK VRD  TG+TLFTDRMHKA  LLR HI+KGCL DPNPDLV L +ITGRTKDGL+LIR                       ASA+MAH+TMLLHNYR NHRMAGLHRGMDPDLLGYYSHWEVEDIQAITKGWYDD PLYPG
Sbjct:  453 MDDVRSVWKLRNPSWNDQEIASDMRAKYASHLLKHVPRIVPSPDILLPRFDNLVETFKNVRD-VTGETLFTDRMHKATKLLRTHIEKGCLHDPNPDLVTLFEITGRTKDGLNLIRSIKGTNRIENFHQLLRLLMGSYHASALMAHFTMLLHNYRRNHRMAGLHRGMDPDLLGYYSHWEVEDIQAITKGWYDDEPLYPG 649
[Close]
BLAST of mRNA_F-serratus_M_contig996.21247.1 vs. uniprot
Match: A0A6H5JRJ6_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ6_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 2.910e-18
Identity = 58/168 (34.52%), Postives = 79/168 (47.02%), Query Frame = 0 
Query:   30 SHLLKHVPRIVPRPEILLPRYDNVIETFKVVRDGATGDTLFTDRMHKAAALLRVHIDKGCLSDPNPDLVPLLQITGRTKDGLDLIRXXXXXXXXXXXXXXXXXXXXXXXASAIMAHYTMLLHNYRWNHRMAGLHRGMDPDLLGYYSHWEVEDIQAITKGWYDDVPLYP 197
            S  L+   R+VPR ++LL R+D VIE F    D  +G+ L   +  KA   LR HI+  CLSDP  D + +    G+ K GL   R                       AS  +A   +L  NYRWN RM   +RG+   L G+Y+ + VE IQ  T  W    P++P
Sbjct:  568 SFFLRSSRRLVPRRDVLLKRFDRVIEEFGGCVDNTSGEVLLRPKAMKAVRQLRKHIENDCLSDP--DGMAMYFAIGKNKHGLTDYRCVRGTNDVEGYHRYLRTLLASYCASPSLAQSVLLEFNYRWNLRMMIKNRGLPAALGGHYNQYLVESIQRDTADWDSSHPVFP 733
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig996.21247.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0J2_ECTSI1.470e-9372.733'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JRJ6_9PHAE2.910e-1834.523'-5' exonuclease domain-containing protein n=1 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig996contigF-serratus_M_contig996:196200..197107 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig996.21247.1mRNA_F-serratus_M_contig996.21247.1Fucus serratus malemRNAF-serratus_M_contig996 196200..199356 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig996.21247.1 ID=prot_F-serratus_M_contig996.21247.1|Name=mRNA_F-serratus_M_contig996.21247.1|organism=Fucus serratus male|type=polypeptide|length=198bp
MDRVRRVWKQRYPSWSNQEIAADMRAKLSSHLLKHVPRIVPRPEILLPRY
DNVIETFKVVRDGATGDTLFTDRMHKAAALLRVHIDKGCLSDPNPDLVPL
LQITGRTKDGLDLIRSLKGTNRVENYHQLLRQLMGSYRASAIMAHYTMLL
HNYRWNHRMAGLHRGMDPDLLGYYSHWEVEDIQAITKGWYDDVPLYPG
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