mRNA_F-serratus_M_contig996.21247.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig996.21247.1
Unique NamemRNA_F-serratus_M_contig996.21247.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig996.21247.1 vs. uniprot
Match: D7G0J2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J2_ECTSI)

HSP 1 Score: 900 bits (2325), Expect = 0.000e+0
Identity = 468/655 (71.45%), Postives = 510/655 (77.86%), Query Frame = 1
Query:    1 RPKRQVGVASLGEIVPHLKALANRYLTQGFRPIQVYWTDLCCGDRSAVQSTLGPASEAVPDFTSSTYFGGEAERSLPSLEFPAHVSPILVRVTSENCEHCTRICFGLLKRARESTPAVLGIDIEWSVRPSEPRRQVSLLQLSARDGYTVLFHLKHDERRPGIMPKALKELLINDTVQLAGVSVRGDLKHILNSYGVQGTNPVDVGQLAGTHLGVKIGARSLQALTATLLRRRLAKGTVRTSNWEMDLSKEQVKYAGLDSYADVLLFCHIWARMDPIFTE*RPDVLSLPVNTPLRLYTSTNSRCVAEGTLVDYPQGSTWGSTGLTIGRVTGGATRMVIKLTARHIPGAFTLHPREDGGQVQALDELELGDLVLWNAINSRLPADPGPVSSLGVVGAGDVAGVTGTSSTSTLEPGG*VEGSASALGTTGVGGVTSAAGATYGPFCAALRDAFTIPDPEAMDRVRRVWKQRYPSWSNQEIAADMRAKLSSHLLKHVPRIVPRPEILLPRYDNVIETFKVVRDGATGDTLFTDRMHKAAALLRVHIDKGCLSDPNPDLVPLLQITGRTKDGLDLIRXXXXXXXXXXXXXXXXXXXXXXXASAIMAHYTMLLHNYRWNHRMAGLHRGMDPDLLGYYSHWEVEDIQAITKGWYDDVPLYPG 1965
            RPKRQVGVASLGEI PHLKALANRYLTQGFRPIQVYWTDLCCGD + +QSTLGPAS+ VPDF  STYF  EAER LP+LEFPA  SPILVRV SENCE  +RIC  LL+RAR S PAVLG DIEWSVRPS PRRQV+L+QLSARDGYTVLFHLK++ERR GI+P ALKELL+NDT+QLAGVSVRGDL H+ NSYGV GT PVD+GQLAG HL VK GARSLQALTA LL RRLAK  VRTSNWE  L+K+Q KYAGLDSYA VLLF  IWARMDPI TE RPDVLSLP NT LRLYTSTN+RCVAEGT+ +Y Q  TWGSTGLTIG VTGGATRMV++LT +H+PGAF LHP E GGQVQALDELELG LVLW+AINSRLP D        +VG G+ AG T TSS ST      V GSAS+ G  G G                           AMD VR VWK R PSW++QEIA+DMRAK +SHLLKHVPRIVP P+ILLPR+DN++ETFK VRD  TG+TLFTDRMHKA  LLR HI+KGCL DPNPDLV L +ITGRTKDGL+LIR                       ASA+MAH+TMLLHNYR NHRMAGLHRGMDPDLLGYYSHWEVEDIQAITKGWYDD PLYPG
Sbjct:    3 RPKRQVGVASLGEIAPHLKALANRYLTQGFRPIQVYWTDLCCGDGNIIQSTLGPASQHVPDFALSTYFAEEAERQLPNLEFPAGASPILVRVASENCELSSRICLQLLRRARASAPAVLGFDIEWSVRPSGPRRQVALVQLSARDGYTVLFHLKYEERRRGILPTALKELLVNDTIQLAGVSVRGDLTHLFNSYGVHGTKPVDIGQLAGVHLHVKNGARSLQALTAELLHRRLAKDAVRTSNWETTLTKDQEKYAGLDSYAGVLLFYRIWARMDPILTECRPDVLSLPANTHLRLYTSTNTRCVAEGTVEEYSQDGTWGSTGLTIGHVTGGATRMVVRLTVKHVPGAFVLHPGEGGGQVQALDELELGALVLWDAINSRLPTDAD------IVGGGN-AGTTATSSASTPGLEEQVGGSASSSGVAGCGXXXXXXXXXXXXXXXXXXXXXXXXPSSAMDDVRSVWKLRNPSWNDQEIASDMRAKYASHLLKHVPRIVPSPDILLPRFDNLVETFKNVRD-VTGETLFTDRMHKATKLLRTHIEKGCLHDPNPDLVTLFEITGRTKDGLNLIRSIKGTNRIENFHQLLRLLMGSYHASALMAHFTMLLHNYRRNHRMAGLHRGMDPDLLGYYSHWEVEDIQAITKGWYDDEPLYPG 649          
BLAST of mRNA_F-serratus_M_contig996.21247.1 vs. uniprot
Match: A0A6H5KSD7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSD7_9PHAE)

HSP 1 Score: 214 bits (545), Expect = 1.760e-57
Identity = 106/163 (65.03%), Postives = 130/163 (79.75%), Query Frame = 1
Query:  667 ALTATLLRRRLAKGTVRTSNWEMDLSKEQVKYAGLDSYADVLLFCHIWARMDPIFTE*RPDVLSLPVNTPLRLYTSTNSRCVAEGTLVDYPQGSTWGSTGLTIGRVTGGATRMVIKLTARHIPGAFTLHPREDGGQVQALDELELGDLVLWNAINSRLPADPG 1155
            ALTA LLRRRL KG VRTSNWE  L+KEQ+ YAGLDSYA VLL+ H+++RMDP++TE RPDVLSLP +T LRLYT TN+RCV EGTL  Y +  TWG+TGL IGR  GG TRMV++LT ++IPGA  L+P  DGG+ QAL+ELELG L+LW+A++   P+ PG
Sbjct:  422 ALTAGLLRRRLPKGQVRTSNWETSLTKEQITYAGLDSYAGVLLYYHVYSRMDPVYTEPRPDVLSLPADTTLRLYTVTNTRCVGEGTLAGYGE-QTWGNTGLAIGRREGGTTRMVVRLTKKYIPGALALYPCHDGGEPQALEELELGTLMLWDAVHMCSPSFPG 583          
BLAST of mRNA_F-serratus_M_contig996.21247.1 vs. uniprot
Match: A0A5C3NET4_9AGAM (3'-5' exonuclease domain-containing protein n=1 Tax=Heliocybe sulcata TaxID=5364 RepID=A0A5C3NET4_9AGAM)

HSP 1 Score: 98.6 bits (244), Expect = 1.790e-17
Identity = 164/635 (25.83%), Postives = 249/635 (39.21%), Query Frame = 1
Query:   37 EIVPHLKALANRYLTQGFRPIQVYWTDLCCGDRSAVQSTLGPASEAVP---DFTSSTYFGGEAERSLPSLEFPAHV--SPILVRVTSENCEHCTRICFGLLKRARESTPAVLGIDIEWSV-RPSEPRRQVSLLQLSARDGYTVLFHLKHDERRPGI-MPKALKELLINDTVQLAGVSVRGDLKHILNSY----GVQGT--NPVDVGQLAGTHLGVKIGARSLQALTATLLRRRLAKG-TVRTS-NWEMD-LSKEQVKYAGLDSYADVLLFCHIWARMDPIFTE*RPDVLSLPVNTPLRLYTSTNSRCVAEGTL-VDYPQGSTWGSTGLTIGRVTGGATRMVIKLTARHIPGAFTLHPREDGGQVQALDELELGDLVLW-----------NAINSRLPADPGPVSSLGVV----------------------------------GAGDVA------GVTGTSSTSTLEPGG*VEGSASALGTTGVGGV--------TSAAGATYGPFCAALRDAFTIPDPEAMDRVRRVWKQRYPSWSNQEIAADMRAKLSSH---LLKHVPRIVPRPEILLPRYDNVIETFKVVRDGATGDTLFTDRMHKAAALLRVHIDKGCLSDPNPDLVPLLQITGRTKDGL 1704
            + +P L A++      G  P+++ +TD   GD++A++  +    E V    DFT           +LP L  P+    + +L  V   N    T     ++          + +D+EWSV   S  R +V+++ + A DG  +L  L+   R   + +P  L   L   +V   GV +  D KH+  S     GV       V++G LA  H        SL  L A  +R  L K   +R S +W+ D +S  Q +YA LD+YA   +F  +  R         P   + P  TP+ L +S  S  VA+G + +D P        G+ +        R++I +T+  +PG          G+     E       L            N   +R  + P P SS   V                                  GA D A        + T   + L+P G +  +  +L T  +G V         S       PF  ALRDA  IPDP+    + R  ++R  +W          A L  H   L + V RIVP PEILLPR  +V++ F  ++D  TG  LF D+       +  +I +G  SDP    + L    G+ K GL
Sbjct:  615 QFMPALGAISRLLKMYGHDPVELAFTDNVRGDKAALEEVIPSLREGVTPVKDFT-----------TLPKLSVPSDEWNAVLLSSVYQINTRFNT-----IMADLAADAKLYVSLDMEWSVDTASGLRGRVAVISV-AYDGVILLVWLRCCLRNGCLNLPTGLLAFLRAPSVIKVGVKITADFKHLFASCDFREGVDDPFRGAVNLGALAKAHNPSIKATISLADLVAVYVRHHLPKDEAIRVSTDWDNDEMSHAQQEYAALDAYAGWAVFQALGQRESG-----GPVTATTPGATPVTLMSSDRSTAVAQGHIALDRPSKHD----GINVS-----PKRVLIVVTSVLVPGHLVPKELLSSGKDTPFSEFPAPPFKLLCKERHLRTRAANEAVTRPISPPTPASSAETVYLDPSTLPAAEPDTENEPDYLERDTDWDLMTEDPGAKDQAVESSDRDPSATVKAAALDPDG-LSDAWESLSTRVLGDVFHLMHEFKISVHHGLRRPFARALRDALFIPDPDDKVIIERFLEERQTTWD---------AMLLYHPCWLFRRVKRIVPPPEILLPRVRDVLQKFGPLKDSTTGQPLFNDKAWDICTNVLENIRRGYYSDPPG--IQLYFTRGQDKYGL 1206          
BLAST of mRNA_F-serratus_M_contig996.21247.1 vs. uniprot
Match: A0A6H5JRJ6_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ6_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 1.270e-15
Identity = 58/168 (34.52%), Postives = 79/168 (47.02%), Query Frame = 1
Query: 1459 SHLLKHVPRIVPRPEILLPRYDNVIETFKVVRDGATGDTLFTDRMHKAAALLRVHIDKGCLSDPNPDLVPLLQITGRTKDGLDLIRXXXXXXXXXXXXXXXXXXXXXXXASAIMAHYTMLLHNYRWNHRMAGLHRGMDPDLLGYYSHWEVEDIQAITKGWYDDVPLYP 1962
            S  L+   R+VPR ++LL R+D VIE F    D  +G+ L   +  KA   LR HI+  CLSDP  D + +    G+ K GL   R                       AS  +A   +L  NYRWN RM   +RG+   L G+Y+ + VE IQ  T  W    P++P
Sbjct:  568 SFFLRSSRRLVPRRDVLLKRFDRVIEEFGGCVDNTSGEVLLRPKAMKAVRQLRKHIENDCLSDP--DGMAMYFAIGKNKHGLTDYRCVRGTNDVEGYHRYLRTLLASYCASPSLAQSVLLEFNYRWNLRMMIKNRGLPAALGGHYNQYLVESIQRDTADWDSSHPVFP 733          
BLAST of mRNA_F-serratus_M_contig996.21247.1 vs. uniprot
Match: A0A3P3Y2D1_PLABS (3'-5' exonuclease domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y2D1_PLABS)

HSP 1 Score: 81.6 bits (200), Expect = 3.580e-12
Identity = 130/549 (23.68%), Postives = 212/549 (38.62%), Query Frame = 1
Query:   64 ANRYLTQGFRPIQVYWTDLCCGDRSAVQSTLGPASEAVPDFTSSTYFGGE--AERSLPSLEFPAHVSPILVRVTSENCEHCTRICFGLLKRARESTPAVLGIDIEWSV-------RPSEPRRQVSLLQLSARDGYTVLFHLKHDERRPGIMPKALKELLINDTVQLAGVSVRGDLKHILNSYGVQGTNPVDVGQLAGTHLGVKIGARSLQALTATLLRRRLAKGT-VRTS-NWEMDLSKEQVKYAGLDSYADVLLFCHIWARMDPIFTE*RPDVLSLPVNTP---LRL-YTSTNSRCVAEGTLVDYPQGSTWGSTGLTIGRVTGGATRMVIKLTARHIPGAFTLHPREDGGQVQALDELELGDLVLWNAINSRLPADPGPVSSLGVVGAGDV---AGVTGTSSTSTLEPGG*VEGSASALGTTGVGGVTSAAGATYGPFCAALRDAFTIPDPEAMDRVRRVWKQRYPSWSNQEIAADMRAKL--SSHLLKHVPRIVPRPEILLPRYDNVIETFKVVRDGATGDTLFTDRMHKAAALLRVHIDKGCLSDP 1650
            A R L +  R  Q    D      S V +  G   + V   + S    G   A+ ++PS  +P     +L    SE  +    +   LL  A +    V+G D EW V       R    R +V  +Q++  +G   L  +    ++   +P+A+  LL +  +   G  ++ D   +L  +GV   N VDV  L      +     SL+ L + +    L K   +R S +W   LS+ Q++YA  D++A + L+ +        FT+ +     +P+      LR+     NS+ VA GT+V+    S           VT     +++++     PG   +  R      Q + EL +   V   +I       P    S  VV   D+          +T+  +P                             F AA+RDA  + DPE  D VRR  ++        ++  D  A +  S      + R   RP  +      V++ ++  +D  T D L T+   K    +RVH+ KGCLSDP
Sbjct:  740 AQRILEESSRSSQT--VDFAAAVASFVSAVTGATDQLVSLRSISARQRGRDLADSAVPSFSWPPSDGRVL-STPSEINDVVDAVYRTLLSEAPDKR--VIGYDQEWDVVMTRLGGRFVSSRSRVRTIQIAMSNGEMYLVRVTDAMKQ---LPRAVVTLLADARIAKVGRQIQHDAAKLLKDFGVHLNNCVDVAVLGKRRGKLSTSKLSLERLMSLVFHVSLEKPPHIRVSEHWSGPLSRAQIRYANRDAFAGLALYHY--------FTQFQDCSTPIPLTDAAPGLRVDIVIGNSKRVASGTIVENSGTSR---------DVTASQHVLLVEVDELSAPG-LRIATRNGLPSFQTIKELPVRLPVRLQSIRRARQCLPLESQSDDVVVLKDIFHWLNDLPVKATNAYQP----------------------------AFLAAMRDAILVVDPEDKDMVRRKLEEAG------QLPDDFEAFIHNSRWARSRIKRATRRPVEMDEAVQAVVDAYRSAKDPMTNDPLLTEAGLKKIEAMRVHVRKGCLSDP 1228          
BLAST of mRNA_F-serratus_M_contig996.21247.1 vs. uniprot
Match: A0A3P3YF60_PLABS (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YF60_PLABS)

HSP 1 Score: 81.6 bits (200), Expect = 3.740e-12
Identity = 130/549 (23.68%), Postives = 212/549 (38.62%), Query Frame = 1
Query:   64 ANRYLTQGFRPIQVYWTDLCCGDRSAVQSTLGPASEAVPDFTSSTYFGGE--AERSLPSLEFPAHVSPILVRVTSENCEHCTRICFGLLKRARESTPAVLGIDIEWSV-------RPSEPRRQVSLLQLSARDGYTVLFHLKHDERRPGIMPKALKELLINDTVQLAGVSVRGDLKHILNSYGVQGTNPVDVGQLAGTHLGVKIGARSLQALTATLLRRRLAKGT-VRTS-NWEMDLSKEQVKYAGLDSYADVLLFCHIWARMDPIFTE*RPDVLSLPVNTP---LRL-YTSTNSRCVAEGTLVDYPQGSTWGSTGLTIGRVTGGATRMVIKLTARHIPGAFTLHPREDGGQVQALDELELGDLVLWNAINSRLPADPGPVSSLGVVGAGDV---AGVTGTSSTSTLEPGG*VEGSASALGTTGVGGVTSAAGATYGPFCAALRDAFTIPDPEAMDRVRRVWKQRYPSWSNQEIAADMRAKL--SSHLLKHVPRIVPRPEILLPRYDNVIETFKVVRDGATGDTLFTDRMHKAAALLRVHIDKGCLSDP 1650
            A R L +  R  Q    D      S V +  G   + V   + S    G   A+ ++PS  +P     +L    SE  +    +   LL  A +    V+G D EW V       R    R +V  +Q++  +G   L  +    ++   +P+A+  LL +  +   G  ++ D   +L  +GV   N VDV  L      +     SL+ L + +    L K   +R S +W   LS+ Q++YA  D++A + L+ +        FT+ +     +P+      LR+     NS+ VA GT+V+    S           VT     +++++     PG   +  R      Q + EL +   V   +I       P    S  VV   D+          +T+  +P                             F AA+RDA  + DPE  D VRR  ++        ++  D  A +  S      + R   RP  +      V++ ++  +D  T D L T+   K    +RVH+ KGCLSDP
Sbjct: 1697 AQRILEESSRSSQT--VDFAAAVASFVSAVTGATDQLVSLRSISARQRGRDLADSAVPSFSWPPSDGRVL-STPSEINDVVDAVYRTLLSEAPDKR--VIGYDQEWDVVMTRLGGRFVSSRSRVRTIQIAMSNGEMYLVRVTDAMKQ---LPRAVVTLLADARIAKVGRQIQHDAAKLLKDFGVHLNNCVDVAVLGKRRGKLSTSKLSLERLMSLVFHVSLEKPPHIRVSEHWSGPLSRAQIRYANRDAFAGLALYHY--------FTQFQDCSTPIPLTDAAPGLRVDIVIGNSKRVASGTIVENSGTSR---------DVTASQHVLLVEVDELSAPG-LRIATRNGLPSFQTIKELPVRLPVRLQSIRRARQCLPLESQSDDVVVLKDIFHWLNDLPVKATNAYQP----------------------------AFLAAMRDAILVVDPEDKDMVRRKLEEAG------QLPDDFEAFIHNSRWARSRIKRATRRPVEMDEAVQAVVDAYRSAKDPMTNDPLLTEAGLKKIEAMRVHVRKGCLSDP 2185          
BLAST of mRNA_F-serratus_M_contig996.21247.1 vs. uniprot
Match: A0A367KBH8_RHIAZ (3'-5' exonuclease domain-containing protein n=3 Tax=Rhizopus TaxID=4842 RepID=A0A367KBH8_RHIAZ)

HSP 1 Score: 71.2 bits (173), Expect = 1.130e-9
Identity = 56/199 (28.14%), Postives = 96/199 (48.24%), Query Frame = 1
Query:  220 RSLPSLEFPAHVSPILVRVTSENCEHCTRICFGLLKRARESTPAVLGIDIEW--SVRPSEPRRQVSLLQLSARDGYTVLFHLKHDERRPGIMPKALKELLINDTVQLAGVSVRGDLKHILNSYGVQGTNPVDVGQLAGTHL---GVKIGARSLQALTATLLRRRLAKGTVRTSNWEM-DLSKEQVKYAGLDSYADVLLF 798
            + LP L +P H      +V   N E   ++   L +  +     V G+D EW  +    +P +++SL+Q+ + +   ++        R    PK L+    +  +   GV++R D   +   +G++    V++   A         K   RSL+ALTA  L+RR+AKG VR SNW +  L+ +Q+ YA LD+YA   ++
Sbjct:   75 QDLPQLTYPKHY-----KVECINTED--KVNTTLREFLKSQQGDVFGVDFEWPPTFIKGQPEKKISLVQICSSNAILLV-----QTTRMKSFPKELQRFFEDRDLLKTGVNIRMDGLKLHRDFGIKTNGLVELMSFANASKLPEVKKYHMRSLRALTAFFLKRRMAKGDVRISNWAVRSLTPKQISYAALDAYASYQIY 261          
BLAST of mRNA_F-serratus_M_contig996.21247.1 vs. uniprot
Match: UPI001568D0F9 (exonuclease 3'-5' domain-containing protein 2 n=2 Tax=Maniola TaxID=111919 RepID=UPI001568D0F9)

HSP 1 Score: 72.4 bits (176), Expect = 1.410e-9
Identity = 55/151 (36.42%), Postives = 84/151 (55.63%), Query Frame = 1
Query:  355 LGIDIEWSVRPSEPRRQVSLLQLSARDGYTVLFHLKHDERRPGIMPKALKELLINDTVQLAGVSVRGDLKHILNSYGVQGTNPVDVGQLAGTHL-GVKIGARSLQALTATLLRRRLAKG-TVRTSNWEMD-LSKEQVKYAGLDSYADVLLF 798
            +G D EW V     R+ V+LLQLS  DGY  LF L   +     +PKAL++LL ++T+   GV+ + D +++   YGV     +DV  L   HL G + G   L +L+ +LL   L K   +R S+WE + LS+ Q+ YA  D++  + +F
Sbjct:   69 IGFDCEW-VTEQGRRQPVALLQLSTFDGYCALFRLNQIKT----IPKALQDLLQDETIYKVGVAPKDDARYLSQDYGVYMEGTLDVRHLV--HLCGYESGG--LASLSKSLLGIVLDKTWRIRCSDWEAEQLSERQINYAAADAHVAIRIF 210          
BLAST of mRNA_F-serratus_M_contig996.21247.1 vs. uniprot
Match: A0A5B1QYD9_9AGAM (Ribonuclease H-like protein (Fragment) n=1 Tax=Dentipellis sp. KUC8613 TaxID=1883078 RepID=A0A5B1QYD9_9AGAM)

HSP 1 Score: 70.5 bits (171), Expect = 2.570e-9
Identity = 50/156 (32.05%), Postives = 81/156 (51.92%), Query Frame = 1
Query:  355 LGIDIEWSV---RPSEPRRQVSLLQLSARDGYTVLFHLKHDERRPGIMPKALKELLINDTVQLAGVSVRGDLKHILNSYGVQGTNPVDVGQLAGT-----HLGVKIGARSLQALTATLLRRRLAKGTVRTSNWEMDLSKEQVKYAGLDSYADVLLF 798
            +G D+EW V   R     R+ +L+QL   D   +L       ++    P+ +KEL+ + TV   G ++R D   +   +G+  +N V++G +A           K    SL  + A  L R L KG VRTSNWE +LS+EQ++YA  D+Y  ++++
Sbjct:   35 VGFDLEWRVIMRRGPMIERRTALVQLC--DSSMILLLQVSAMKK---FPQKVKELIESPTVVKMGANIRNDGMKLYRDFGILASNLVELGGVARQADERFENAYKRSIVSLAKVVAFYLHRALEKGPVRTSNWEAELSREQMEYAANDAYCALMVY 185          
BLAST of mRNA_F-serratus_M_contig996.21247.1 vs. uniprot
Match: A0A365MLJ2_GIBIN (3'-5' exonuclease domain-containing protein n=6 Tax=Fusarium fujikuroi species complex TaxID=171627 RepID=A0A365MLJ2_GIBIN)

HSP 1 Score: 70.9 bits (172), Expect = 4.410e-9
Identity = 64/201 (31.84%), Postives = 95/201 (47.26%), Query Frame = 1
Query:  340 STPAVLGIDIEWSVR----PSEPRRQVSLLQLSARDGYTVLFHLKHDERRPGIMPKALKELLINDTVQLAGVSVRGDLKHILNSYGVQGTNPVDVGQL--------AGTHLGVKIGARSLQALTATLLRRRLAKGT-VRTSNWEMDLSKEQVKYAGLDSYADVLLFCHI-WARMDPIFTE*RPDVLSLPVNTPLRLYTSTN 900
            S   V+G D+EW V      S PRR VSL+Q+ A      LFH+    R   + P   K ++ +++V   GV+++GD   + N+ G+      ++  L        AG    +     SL   T  +L   L KG  VR+SNW M LS +QV Y+  D+YA + L+  +   RM    T  RP  +    N P+R  T+ N
Sbjct:  215 SNEKVIGFDLEWFVARGPASSNPRRNVSLIQI-ASPSRVGLFHVALFPRDDFVAP-TFKRIMEDESVTKVGVAIKGDCTRLKNNLGINSKGIFELSHLYKLVKYSKAGELDRINKVMVSLAVQTQEMLGLPLFKGDDVRSSNWMMRLSADQVAYSASDAYAGLQLYYVLEQERMKLQPTPPRPAFVEQ--NLPIRFLTADN 411          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig996.21247.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0J2_ECTSI0.000e+071.453'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KSD7_9PHAE1.760e-5765.03Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5C3NET4_9AGAM1.790e-1725.833'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JRJ6_9PHAE1.270e-1534.523'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A3P3Y2D1_PLABS3.580e-1223.683'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A3P3YF60_PLABS3.740e-1223.68DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A367KBH8_RHIAZ1.130e-928.143'-5' exonuclease domain-containing protein n=3 Ta... [more]
UPI001568D0F91.410e-936.42exonuclease 3'-5' domain-containing protein 2 n=2 ... [more]
A0A5B1QYD9_9AGAM2.570e-932.05Ribonuclease H-like protein (Fragment) n=1 Tax=Den... [more]
A0A365MLJ2_GIBIN4.410e-931.843'-5' exonuclease domain-containing protein n=6 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig996contigF-serratus_M_contig996:196200..199356 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score297.7
Seed ortholog evalue3.9e-78
Seed eggNOG ortholog2880.D7G0J2
Preferred nameWRN
KEGG koko:K10900,ko:K20777
Hectar predicted targeting categoryother localisation
GOsGO:0000018,GO:0000019,GO:0000217,GO:0000287,GO:0000400,GO:0000403,GO:0000405,GO:0000723,GO:0000724,GO:0000725,GO:0000731,GO:0000738,GO:0000781,GO:0001302,GO:0001325,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003684,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006281,GO:0006284,GO:0006302,GO:0006308,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007154,GO:0007275,GO:0007568,GO:0007569,GO:0008026,GO:0008094,GO:0008104,GO:0008150,GO:0008152,GO:0008156,GO:0008296,GO:0008297,GO:0008309,GO:0008310,GO:0008311,GO:0008408,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009267,GO:0009314,GO:0009378,GO:0009411,GO:0009416,GO:0009605,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010212,GO:0010225,GO:0010259,GO:0010332,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010941,GO:0015630,GO:0016043,GO:0016462,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022607,GO:0030145,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032200,GO:0032356,GO:0032357,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0033036,GO:0033365,GO:0033554,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0040008,GO:0040009,GO:0042162,GO:0042592,GO:0042594,GO:0042623,GO:0042802,GO:0042803,GO:0042981,GO:0042995,GO:0043005,GO:0043067,GO:0043085,GO:0043138,GO:0043140,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044464,GO:0044806,GO:0044877,GO:0045005,GO:0045910,GO:0045911,GO:0045934,GO:0045935,GO:0045950,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0046983,GO:0048478,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051276,GO:0051336,GO:0051345,GO:0051641,GO:0051716,GO:0051880,GO:0060249,GO:0060255,GO:0060542,GO:0061749,GO:0061820,GO:0061821,GO:0061849,GO:0062037,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070035,GO:0070336,GO:0070337,GO:0070727,GO:0071103,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071496,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090305,GO:0090329,GO:0090656,GO:0090657,GO:0090737,GO:0097159,GO:0097458,GO:0098530,GO:0098687,GO:0104004,GO:0120025,GO:0140097,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902570,GO:1905773,GO:2000104,GO:2000112,GO:2000113
EggNOG free text desc.3'-5' exonuclease activity
EggNOG OGsKOG4373@1,KOG4373@2759
EC3.1.11.1,3.6.4.12
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03032,ko03400
Exons8
Model size1965
Cds size594
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932794.0545492-CDS-F-serratus_M_contig996:196199..1963121622932794.0545492-CDS-F-serratus_M_contig996:196199..196312Fucus serratus maleCDSF-serratus_M_contig996 196200..196312 -
1690964478.7689776-CDS-F-serratus_M_contig996:196199..1963121690964478.7689776-CDS-F-serratus_M_contig996:196199..196312Fucus serratus maleCDSF-serratus_M_contig996 196200..196312 -
1622932794.0727265-CDS-F-serratus_M_contig996:196453..1967381622932794.0727265-CDS-F-serratus_M_contig996:196453..196738Fucus serratus maleCDSF-serratus_M_contig996 196454..196738 -
1690964478.7919762-CDS-F-serratus_M_contig996:196453..1967381690964478.7919762-CDS-F-serratus_M_contig996:196453..196738Fucus serratus maleCDSF-serratus_M_contig996 196454..196738 -
1622932794.0954623-CDS-F-serratus_M_contig996:196911..1971071622932794.0954623-CDS-F-serratus_M_contig996:196911..197107Fucus serratus maleCDSF-serratus_M_contig996 196912..197107 -
1690964478.8053546-CDS-F-serratus_M_contig996:196911..1971071690964478.8053546-CDS-F-serratus_M_contig996:196911..197107Fucus serratus maleCDSF-serratus_M_contig996 196912..197107 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932794.1119158-UTR-F-serratus_M_contig996:197107..1971661622932794.1119158-UTR-F-serratus_M_contig996:197107..197166Fucus serratus maleUTRF-serratus_M_contig996 197108..197166 -
1690964478.8207188-UTR-F-serratus_M_contig996:197107..1971661690964478.8207188-UTR-F-serratus_M_contig996:197107..197166Fucus serratus maleUTRF-serratus_M_contig996 197108..197166 -
1622932794.1312866-UTR-F-serratus_M_contig996:197259..1974461622932794.1312866-UTR-F-serratus_M_contig996:197259..197446Fucus serratus maleUTRF-serratus_M_contig996 197260..197446 -
1690964478.8319921-UTR-F-serratus_M_contig996:197259..1974461690964478.8319921-UTR-F-serratus_M_contig996:197259..197446Fucus serratus maleUTRF-serratus_M_contig996 197260..197446 -
1622932794.150199-UTR-F-serratus_M_contig996:197630..1980021622932794.150199-UTR-F-serratus_M_contig996:197630..198002Fucus serratus maleUTRF-serratus_M_contig996 197631..198002 -
1690964478.8430688-UTR-F-serratus_M_contig996:197630..1980021690964478.8430688-UTR-F-serratus_M_contig996:197630..198002Fucus serratus maleUTRF-serratus_M_contig996 197631..198002 -
1622932794.1691961-UTR-F-serratus_M_contig996:198189..1984081622932794.1691961-UTR-F-serratus_M_contig996:198189..198408Fucus serratus maleUTRF-serratus_M_contig996 198190..198408 -
1690964478.853889-UTR-F-serratus_M_contig996:198189..1984081690964478.853889-UTR-F-serratus_M_contig996:198189..198408Fucus serratus maleUTRF-serratus_M_contig996 198190..198408 -
1622932794.1951451-UTR-F-serratus_M_contig996:198614..1990461622932794.1951451-UTR-F-serratus_M_contig996:198614..199046Fucus serratus maleUTRF-serratus_M_contig996 198615..199046 -
1690964478.8651066-UTR-F-serratus_M_contig996:198614..1990461690964478.8651066-UTR-F-serratus_M_contig996:198614..199046Fucus serratus maleUTRF-serratus_M_contig996 198615..199046 -
1622932794.2151117-UTR-F-serratus_M_contig996:199254..1993561622932794.2151117-UTR-F-serratus_M_contig996:199254..199356Fucus serratus maleUTRF-serratus_M_contig996 199255..199356 -
1690964478.8759212-UTR-F-serratus_M_contig996:199254..1993561690964478.8759212-UTR-F-serratus_M_contig996:199254..199356Fucus serratus maleUTRF-serratus_M_contig996 199255..199356 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig996.21247.1prot_F-serratus_M_contig996.21247.1Fucus serratus malepolypeptideF-serratus_M_contig996 196200..197107 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig996.21247.1

>prot_F-serratus_M_contig996.21247.1 ID=prot_F-serratus_M_contig996.21247.1|Name=mRNA_F-serratus_M_contig996.21247.1|organism=Fucus serratus male|type=polypeptide|length=198bp
MDRVRRVWKQRYPSWSNQEIAADMRAKLSSHLLKHVPRIVPRPEILLPRY
DNVIETFKVVRDGATGDTLFTDRMHKAAALLRVHIDKGCLSDPNPDLVPL
LQITGRTKDGLDLIRSLKGTNRVENYHQLLRQLMGSYRASAIMAHYTMLL
HNYRWNHRMAGLHRGMDPDLLGYYSHWEVEDIQAITKGWYDDVPLYPG
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mRNA from alignment at F-serratus_M_contig996:196200..199356-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig996.21247.1 ID=mRNA_F-serratus_M_contig996.21247.1|Name=mRNA_F-serratus_M_contig996.21247.1|organism=Fucus serratus male|type=mRNA|length=3157bp|location=Sequence derived from alignment at F-serratus_M_contig996:196200..199356- (Fucus serratus male)
CGCCCCAAGCGGCAAGTCGGCGTCGCATCTCTGGGTGAGATCGTTCCTCA TCTAAAGGCGCTCGCCAACCGGTACCTGACTCAGGGGTTCCGCCCCATCC AGGTGGGTCGAAAGAGTGAGTTTTGCTTCGAGTGTTGTTTGGTCGGCGAT CTGAAACCCCGGCCTTTGTAACCGGATACATGGCAACATATATGCTTTTG TTTAGTACCAAAGCCGTTAATATATGTCCACCCGAAAGCCAAAAAATAGT CGCTGAACCGATCACAACACACTCAACATGTAAACATTTTTTTCCGGCAT TCTTTCGAAGGTATACTGGACAGACTTGTGCTGCGGGGATAGGAGCGCTG TCCAATCAACGCTTGGACCGGCATCTGAGGCTGTACCGGATTTTACGTCG TCCACATACTTCGGCGGCGAAGCTGAGCGGTCGCTCCCGAGTCTCGAGTT CCCTGCCCATGTCTCACCAATTTTAGTGCGCGTGACCAGCGAGAATTGCG AGCACTGTACCAGAATTTGCTTCGGGCTGTTGAAGCGCGCGCGAGAATCA ACTCCTGCGGTGCTCGGCATCGACATTGAGTGGAGTGTGCGCCCATCCGA GCCTCGTCGCCAAGTTTCACTTTTACAGTTGTCAGCACGCGACGGCTATA CGGTCCTCTTCCACCTTAAGCATGACGAGCGCCGACCAGGAATCATGCCC AAAGCTTTAAAAGAGCTGCTGATCAACGACACCGTTCAACTAGTAAGTTT GGTTTACTGTTTTAAAGCTCGAAGCGTGGCACGAAAACGTATAATTTGCC CCGACGACGTAAACAACACAAAAGAGAGCACGGACGTCAGCAAACGCAGT ATGTCGATGTTTTTTCTATCTTTCAACTTGTCAATGCCAATGTCTTATTC TGTCTACGATACTTCCCTGCGGTCTTCGTTGTCGTTGGTACTCTCCAGGC AGGAGTTTCGGTTCGTGGCGACCTCAAACACATTTTGAACAGCTACGGTG TTCAGGGCACAAACCCGGTCGATGTCGGTCAGTTGGCAGGGACGCATCTC GGTGTCAAGATCGGGGCACGCTCGCTCCAAGCCCTGACGGCAACACTACT CCGCCGACGACTTGCGAAGGGCACAGTTCGTACCAGCAATTGGGAGATGG ATCTATCGAAGGAGCAGGTATGCTGATATTTTTCCGCTACTTCCCATGTA GTATCGAGAAGCGGGATGATTCATGAGACGCGCTCAATTTTTTTCTTCTT ATTTCAAGGCCTTACCGTCCAGTCAGCTCTTGTTGCACTCCCTCTCTGTT GTTTTTGAATGCTCCCTGAAAAAACTATCTGTCCCAATGGTCTTGTCGTC GCAGGTGAAATATGCAGGGCTTGATTCTTACGCCGACGTTCTCCTCTTTT GCCATATTTGGGCACGAATGGACCCCATCTTCACGGAATGACGGCCGGAT GTGCTATCGCTTCCTGTCAACACCCCTCTGCGCCTGTACACGAGTACAAA TTCCCGCTGTGTGGCGGAGGGGACCCTTGTAGACTATCCTCAGGGATCCA CTTGGGGAAGCACTGGCCTGACGATTGGGCGCGTGACGGGGGGTGCTACA CGTATGGTGATAAAGTTGACGGCGAGGCATATCCCCGGAGCCTTCACGCT ACACCCTCGTGAGGATGGCGGCCAAGTACAAGCACTGGACGAGCTTGAGC TTGGGGATCTCGTTCTGTGGAATGCGGTAAGTTGGGATTGCTTTTGTGGG CCTGTTTCTCCTGACTTGACTTCAAAACACAAGACTAAGTGCCGCGGGTT GAGCATGATTCGCGATTGTGGAGCCAAAGGACGCTTTGCCGTGACCCATA ACCCTAATCTATAACCCTAATCTGCGACGTGCACTGACCTCTTTTTGTTT TCTTGGCCAGATTAATTCGAGACTACCGGCAGACCCTGGGCCAGTATCAT CTTTGGGTGTCGTGGGGGCGGGTGACGTTGCTGGCGTTACAGGAACTAGT TCGACGTCGACACTTGAGCCTGGAGGGTAAGTGGAAGGGTCGGCGTCCGC GTTGGGTACGACAGGGGTGGGTGGCGTCACTAGCGCCGCCGGAGCCAGTC CTTCAAATGACGGAGGCAAGCCAGTGACCAAGCTTGACATTTGGCACGGC GAGCATCGGGTCATCGTCTGTGCGTCGAAAAAAAACGGAGCGTATGGCCC TTTTTGCGCTGCTCTACGGGATGCTTTCACAATACCTGATCCTGAAGCCA TGGACCGCGTGAGGAGAGTATGGAAGCAGCGGTATCCTTCGTGGAGTAAC CAGGAGATCGCGGCGGACATGAGGGCGAAACTCTCGAGTCACCTCTTGAA ACATGTCCCACGGATAGTGCCTCGTCCGGAGATTCTTCTACCGCGATATG ACAACGTCATCGAGACTTTCAAGGTTGTTCGTGACGGCGCGACAGGTAAT ACTTGAGTTGGTTGTTCTTAATCGACCCGCTGGCTGTATTTCTTTCTTCA ATCGAGCGCCTGGCTGAGTTCTTGGCTTTCGTATTACGACCTGTTTCATA GTGGCATATTCAAACAATTAAACTCTTCTTCTCGTTTTTTTTTCGCGCGT TGATGTTTTCCTGATCAGGCGACACGCTTTTCACGGACCGCATGCACAAG GCCGCGGCTCTCCTCCGCGTCCACATCGACAAAGGGTGCTTGTCGGACCC AAATCCGGACCTCGTTCCGTTACTCCAGATCACGGGGCGCACGAAGGACG GTCTAGATTTGATTCGGTCACTAAAAGGCACCAACCGTGTGGAAAACTAC CACCAACTGCTGCGCCAGCTGATGGGATCCTATCGTGCTTCTGCCATCAT GGCACATTACACCATGCTCCTACATAACTACAGGTGGAACCATCGCATGG CCGGTACATCAAAGTTGTGAGGTCGCGCAGACGTTCTTCTGTTGTTGTTT TTTTAGCCAGAGCAGGCGGGAAGGTCTGCGAGGACGATTGCAGGAATGTA AAGTAACGTGGATTCCGTTACTATATTTTTGCTTCGATCTATAGGTTTGC ACAGGGGTATGGACCCCGACTTGCTCGGCTACTACAGCCACTGGGAAGTT GAGGACATCCAAGCTATCACCAAGGGGTGGTACGACGACGTGCCTCTCTA TCCTGGC
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Coding sequence (CDS) from alignment at F-serratus_M_contig996:196200..199356-

>mRNA_F-serratus_M_contig996.21247.1 ID=mRNA_F-serratus_M_contig996.21247.1|Name=mRNA_F-serratus_M_contig996.21247.1|organism=Fucus serratus male|type=CDS|length=1188bp|location=Sequence derived from alignment at F-serratus_M_contig996:196200..199356- (Fucus serratus male)
ATGGACCGCGTGAGGAGAGTATGGAAGCAGCGGTATCCTTCGTGGAGTAA
CCAGGAGATCGCGGCGGACATGAGGGCGAAACTCTCGAGTCACCTCTTGA
AACATGTCCCACGGATAGTGCCTCGTCCGGAGATTCTTCTACCGCGATAT
GACAACGTCATCGAGACTTTCAAGGTTGTTCGTGACGGCGCGACAGATGG
ACCGCGTGAGGAGAGTATGGAAGCAGCGGTATCCTTCGTGGAGTAACCAG
GAGATCGCGGCGGACATGAGGGCGAAACTCTCGAGTCACCTCTTGAAACA
TGTCCCACGGATAGTGCCTCGTCCGGAGATTCTTCTACCGCGATATGACA
ACGTCATCGAGACTTTCAAGGTTGTTCGTGACGGCGCGACAGGCGACACG
CTTTTCACGGACCGCATGCACAAGGCCGCGGCTCTCCTCCGCGTCCACAT
CGACAAAGGGTGCTTGTCGGACCCAAATCCGGACCTCGTTCCGTTACTCC
AGATCACGGGGCGCACGAAGGACGGTCTAGATTTGATTCGGTCACTAAAA
GGCACCAACCGTGTGGAAAACTACCACCAACTGCTGCGCCAGCTGATGGG
ATCCTATCGTGCTTCTGCCATCATGGCACATTACACCATGCTCCTACATA
ACTACAGGTGGAACCATCGCATGGCCGGCGACACGCTTTTCACGGACCGC
ATGCACAAGGCCGCGGCTCTCCTCCGCGTCCACATCGACAAAGGGTGCTT
GTCGGACCCAAATCCGGACCTCGTTCCGTTACTCCAGATCACGGGGCGCA
CGAAGGACGGTCTAGATTTGATTCGGTCACTAAAAGGCACCAACCGTGTG
GAAAACTACCACCAACTGCTGCGCCAGCTGATGGGATCCTATCGTGCTTC
TGCCATCATGGCACATTACACCATGCTCCTACATAACTACAGGTGGAACC
ATCGCATGGCCGGTTTGCACAGGGGTATGGACCCCGACTTGCTCGGCTAC
TACAGCCACTGGGAAGTTGAGGACATCCAAGCTATCACCAAGGGGTGGTA
CGACGACGTGCCTCTCTATCCTGGCGTTTGCACAGGGGTATGGACCCCGA
CTTGCTCGGCTACTACAGCCACTGGGAAGTTGAGGACATCCAAGCTATCA
CCAAGGGGTGGTACGACGACGTGCCTCTCTATCCTGGC
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