prot_F-serratus_M_contig995.21236.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig995.21236.1
Unique Nameprot_F-serratus_M_contig995.21236.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length178
Homology
BLAST of mRNA_F-serratus_M_contig995.21236.1 vs. uniprot
Match: A0A2D4BWE3_PYTIN (E1 ubiquitin-activating enzyme n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWE3_PYTIN)

HSP 1 Score: 59.7 bits (143), Expect = 3.640e-7
Identity = 36/75 (48.00%), Postives = 48/75 (64.00%), Query Frame = 0
Query:    1 MVIEAIKALKERNGSSIQAIKKHITASNSSLNFTPHQMRSALKKGVESGKFFYFCFVPKMQVKSSYKLSAEAKKP 75
            +++EAIK LKERNGSS QAI KH++A  +  NF  H +  AL+  VE+ K         +QVK+SYKL+   KKP
Sbjct: 1424 LIVEAIKELKERNGSSRQAIAKHVSAKKA--NFASHFLNKALRTAVENEKL--------VQVKASYKLAPSLKKP 1488          
BLAST of mRNA_F-serratus_M_contig995.21236.1 vs. uniprot
Match: A0A6A3F8I3_9STRA (H15 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3F8I3_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 4.260e-7
Identity = 35/75 (46.67%), Postives = 47/75 (62.67%), Query Frame = 0
Query:    1 MVIEAIKALKERNGSSIQAIKKHITASNSSLNFTPHQMRSALKKGVESGKFFYFCFVPKMQVKSSYKLSAEAKKP 75
            ++++AIK LKERNGSS QAI K +   N   N+  H +  AL+  V++GKF        +QVK SYKLS E +KP
Sbjct:   87 LIVDAIKELKERNGSSRQAIAKVVE--NKKDNYASHHLNKALRTAVDAGKF--------IQVKGSYKLSPELRKP 151          
BLAST of mRNA_F-serratus_M_contig995.21236.1 vs. uniprot
Match: A0A7S1VXP0_9STRA (Hypothetical protein (Fragment) n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VXP0_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 6.910e-7
Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 0
Query:    1 MVIEAIKALKERNGSSIQAIKKHITASNSSLNFTPHQMRSALKKGVESGKFFYFCFVPKMQVKSSYKLSAEAKKPP 76
            ++ E + ALK+R GSS+QAI K +      +    H MR+ALK+GVE+G       +P   VK+SYKLS EAKKPP
Sbjct:   28 LIKECLLALKDRTGSSLQAINKWLEKEKK-VTIKKHVMRAALKRGVETG-----ILIP---VKASYKLSPEAKKPP 94          
BLAST of mRNA_F-serratus_M_contig995.21236.1 vs. uniprot
Match: A0A7S2EXL4_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EXL4_TRICV)

HSP 1 Score: 56.2 bits (134), Expect = 1.090e-6
Identity = 38/79 (48.10%), Postives = 48/79 (60.76%), Query Frame = 0
Query:    1 MVIEAIKALKERNGSSIQAIKKHITASNSSLNFTPHQMRSALKKGVESGKFFYFCFVPKMQVKSSYKLSAEAKKPPPKA 79
            ++ E + ALK+R GSS+ AI K I +   S     H M++ALK GVE G          +QVK+SYKLS EAKKPP KA
Sbjct:   31 VIKECLLALKDRTGSSVYAINKWIESEKKSP-IKKHVMKAALKSGVEKGIL--------IQVKNSYKLSPEAKKPPKKA 100          
BLAST of mRNA_F-serratus_M_contig995.21236.1 vs. uniprot
Match: W5JX74_ANODA (Histone H1 n=3 Tax=argyritarsis section TaxID=44545 RepID=W5JX74_ANODA)

HSP 1 Score: 55.5 bits (132), Expect = 1.750e-6
Identity = 41/82 (50.00%), Postives = 52/82 (63.41%), Query Frame = 0
Query:    1 MVIEAIKALKERNGSSIQAIKKHITASNSS--LNFTPHQMRSALKKGVESGKFFYFCFVPKMQVKS-----SYKLSAEAKKP 75
            M++ AIKALKERNGSS+QAIKK++ A+ ++     TP   RS LK GV +GK         +Q K      S+KLSAEAKKP
Sbjct:   47 MILAAIKALKERNGSSLQAIKKYLAANYTADVAKLTPFIKRS-LKTGVTNGKL--------VQTKGTGATGSFKLSAEAKKP 119          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig995.21236.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D4BWE3_PYTIN3.640e-748.00E1 ubiquitin-activating enzyme n=1 Tax=Pythium ins... [more]
A0A6A3F8I3_9STRA4.260e-746.67H15 domain-containing protein n=4 Tax=Phytophthora... [more]
A0A7S1VXP0_9STRA6.910e-747.37Hypothetical protein (Fragment) n=4 Tax=Ditylum br... [more]
A0A7S2EXL4_TRICV1.090e-648.10Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]
W5JX74_ANODA1.750e-650.00Histone H1 n=3 Tax=argyritarsis section TaxID=4454... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005819Histone H5PRINTSPR00624HISTONEH5coord: 122..139
score: 29.01
coord: 8..25
score: 54.32
coord: 83..97
score: 37.78
coord: 144..163
score: 22.22
IPR005818Linker histone H1/H5, domain H15SMARTSM00526h15plus2coord: 1..65
e-value: 8.4E-8
score: 41.9
IPR005818Linker histone H1/H5, domain H15PFAMPF00538Linker_histonecoord: 1..51
e-value: 1.9E-15
score: 56.9
IPR005818Linker histone H1/H5, domain H15PROSITEPS51504H15coord: 1..70
score: 21.177
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..80
e-value: 8.9E-15
score: 56.6
NoneNo IPR availablePANTHERPTHR11467:SF112HISTONE H5coord: 1..175
NoneNo IPR availablePANTHERPTHR11467HISTONE H1coord: 1..175
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 1..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig995contigF-serratus_M_contig995:29729..30398 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig995.21236.1mRNA_F-serratus_M_contig995.21236.1Fucus serratus malemRNAF-serratus_M_contig995 29729..30398 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig995.21236.1 ID=prot_F-serratus_M_contig995.21236.1|Name=mRNA_F-serratus_M_contig995.21236.1|organism=Fucus serratus male|type=polypeptide|length=178bp
MVIEAIKALKERNGSSIQAIKKHITASNSSLNFTPHQMRSALKKGVESGK
FFYFCFVPKMQVKSSYKLSAEAKKPPPKAKIVKKVAPKKPTKKPASAKKP
TAKKATTKKATTTKTKKVTTAKKPTTAKKSTTTKKPAATKKTATTTKKTV
TKKSATSSKTASSKKAAPKKAVEAKGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005819Histone_H5
IPR005818Histone_H1/H5_H15
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf