prot_F-serratus_M_contig994.21233.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig994.21233.1
Unique Nameprot_F-serratus_M_contig994.21233.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length259
Homology
BLAST of mRNA_F-serratus_M_contig994.21233.1 vs. uniprot
Match: M5GFU1_DACPD (Proteasome subunit beta n=1 Tax=Dacryopinax primogenitus (strain DJM 731) TaxID=1858805 RepID=M5GFU1_DACPD)

HSP 1 Score: 207 bits (528), Expect = 1.340e-63
Identity = 100/188 (53.19%), Postives = 134/188 (71.28%), Query Frame = 0
Query:   48 LATTVVAARFQDGVVIGADSRTSQGNFVANRLTDKITPIYPGIFLARSGSSADSQFVAGVVEAKLEAYRTEFGRAPTVRVAATISRNLCYNNKDQLSAGVICAGWDPREGGSVFSIPQGGSLLELPFAISGSGSVYALGYCDDHLRPGLGRDECVLHVQKALEMALSRDGASGGIIRMCVATRAGVER 235
            L T+++A +F DGVVIGADSRT+ G+++ANR+TDK+T ++  ++  RSGS+AD+Q VA +V   L+ Y  ++G AP V  AA + + LCY NKD LSAG+I AGWD   G SV++IP GG L   P+AI GSGS Y  GYCD   + G  RD+ V  V+  L +A+SRDG+SGG+IRMCV T+ GVER
Sbjct:   11 LGTSIMAVQFTDGVVIGADSRTTTGSYIANRVTDKLTYVHDRVYCCRSGSAADTQAVADIVHYYLQMYMQQYGSAPPVHAAAELFQKLCYENKDNLSAGIIVAGWDKEVGPSVYNIPLGGGLFRQPWAIGGSGSTYVYGYCDATYQEGWNRDQTVEFVRNTLSLAMSRDGSSGGVIRMCVITKEGVER 198          
BLAST of mRNA_F-serratus_M_contig994.21233.1 vs. uniprot
Match: A0A075AMK2_ROZAC (Proteasome subunit beta n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075AMK2_ROZAC)

HSP 1 Score: 207 bits (526), Expect = 1.470e-63
Identity = 97/191 (50.79%), Postives = 135/191 (70.68%), Query Frame = 0
Query:   48 LATTVVAARFQDGVVIGADSRTSQGNFVANRLTDKITPIYPGIFLARSGSSADSQFVAGVVEAKLEAYRTEFGRAPTVRVAATISRNLCYNNKDQLSAGVICAGWDPREGGSVFSIPQGGSLLELPFAISGSGSVYALGYCDDHLRPGLGRDECVLHVQKALEMALSRDGASGGIIRMCVATRAGVERWTV 238
            L TT++A  F  GVVIGADSRT+ G+++ANR+TDK+T ++  ++  RSGS+AD+Q VA +V   L+ Y  E G AP V  AA + + +CY NKD+L AG+I  GWD   GG V+SIP GG+L+  PFAI GSGS Y  G+CD + +PG+ RDEC+  V+ A+ +A++RDG+SGG++R+ V    GVER  V
Sbjct:   12 LGTTIMAVEFNGGVVIGADSRTTTGSYIANRVTDKLTQVHDRVYCCRSGSAADTQAVADMVHYYLQMYAVEHGEAPEVFTAARLFQEVCYQNKDRLMAGIIVGGWDKYHGGRVYSIPLGGALVREPFAIGGSGSSYIYGFCDSNFKPGMTRDECIWFVKNAISLAMARDGSSGGVVRLAVIEEKGVERMFV 202          
BLAST of mRNA_F-serratus_M_contig994.21233.1 vs. uniprot
Match: A0A146I3C2_MYCCL (Proteasome subunit beta n=4 Tax=Mycena TaxID=41247 RepID=A0A146I3C2_MYCCL)

HSP 1 Score: 207 bits (528), Expect = 1.670e-63
Identity = 102/188 (54.26%), Postives = 133/188 (70.74%), Query Frame = 0
Query:   48 LATTVVAARFQDGVVIGADSRTSQGNFVANRLTDKITPIYPGIFLARSGSSADSQFVAGVVEAKLEAYRTEFGRAPTVRVAATISRNLCYNNKDQLSAGVICAGWDPREGGSVFSIPQGGSLLELPFAISGSGSVYALGYCDDHLRPGLGRDECVLHVQKALEMALSRDGASGGIIRMCVATRAGVER 235
            L T+++A +F+DGVVIGADSRT+ G+++ANR+TDK+T ++  ++  RSGS+AD+Q VA +V   L+ Y    G  P V  AA++ +NLCY NKD LSAG+I AGWD   G SV++IP GG L   P+AI GSGS Y  GYCD   R G GRDE V  V+  L +A+SRDG+SGG+IRMCV    GVER
Sbjct:   17 LGTSIMAVQFKDGVVIGADSRTTTGSYIANRVTDKLTHVHDRVYCCRSGSAADTQAVADIVHYYLQMYAQTTGAPPPVHTAASLFQNLCYENKDALSAGIIVAGWDKEIGPSVYNIPLGGGLFRQPWAIGGSGSTYVYGYCDATYREGWGRDETVEFVKNTLSLAMSRDGSSGGVIRMCVIMEDGVER 204          
BLAST of mRNA_F-serratus_M_contig994.21233.1 vs. uniprot
Match: A0A8H4QZF2_9AGAR (Proteasome subunit beta n=1 Tax=Agrocybe pediades TaxID=84607 RepID=A0A8H4QZF2_9AGAR)

HSP 1 Score: 207 bits (528), Expect = 1.720e-63
Identity = 104/195 (53.33%), Postives = 136/195 (69.74%), Query Frame = 0
Query:   42 LSTRDV-LATTVVAARFQDGVVIGADSRTSQGNFVANRLTDKITPIYPGIFLARSGSSADSQFVAGVVEAKLEAYRTEFGRAPTVRVAATISRNLCYNNKDQLSAGVICAGWDPREGGSVFSIPQGGSLLELPFAISGSGSVYALGYCDDHLRPGLGRDECVLHVQKALEMALSRDGASGGIIRMCVATRAGVER 235
            L T +V L T+++A +F  GVVIGADSRT+ G+++ANR+TDK+T I+  I+  RSGS+AD+Q VA +V   L+ Y    G+ P+V  AA + + LCY NKD LSAG+I AGWD   G SV++IP GG L   P+AI GSGS Y  GYCD   + G GRDE +  VQ  L +A+SRDG+SGG+IRMCV T+  VER
Sbjct:    9 LKTGEVNLGTSIMAVQFDGGVVIGADSRTTTGSYIANRVTDKLTHIHDRIYCCRSGSAADTQAVADIVHYNLQMYSQNAGKPPSVHTAAALFQKLCYENKDALSAGIIVAGWDEANGPSVYNIPLGGGLFRQPWAIGGSGSTYVYGYCDATYKEGWGRDETINFVQNTLSLAMSRDGSSGGVIRMCVITKDSVER 203          
BLAST of mRNA_F-serratus_M_contig994.21233.1 vs. uniprot
Match: F2U198_SALR5 (Proteasome subunit beta n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U198_SALR5)

HSP 1 Score: 207 bits (526), Expect = 1.780e-63
Identity = 100/186 (53.76%), Postives = 134/186 (72.04%), Query Frame = 0
Query:   50 TTVVAARFQDGVVIGADSRTSQGNFVANRLTDKITPIYPGIFLARSGSSADSQFVAGVVEAKLEAYRTEFGRAPTVRVAATISRNLCYNNKDQLSAGVICAGWDPREGGSVFSIPQGGSLLELPFAISGSGSVYALGYCDDHLRPGLGRDECVLHVQKALEMALSRDGASGGIIRMCVATRAGVER 235
            TT++A  F DGVVIGADSRT+ G +VANR+TDK+T +   I+  RSGS+AD+Q +A +V   LE +  E    P V VAA+I R  CYNN+DQL+AG+ICAG+D  +GG V+SIP GG ++  PFAI GSGS +  G+CD   + G+ +DEC+  V+ AL +A+SRDG+SGG+IR  V T+ GVER
Sbjct:   21 TTIMAVEFADGVVIGADSRTTTGAYVANRVTDKLTKLTDYIYCCRSGSAADTQAIADIVRYYLELHSVEIDEEPRVGVAASIFREFCYNNRDQLTAGIICAGFDEHKGGQVYSIPLGGLVVRQPFAIGGSGSTFLYGHCDSTFKEGMAKDECLTFVRNALALAMSRDGSSGGVIRTAVITKDGVER 206          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig994.21233.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
M5GFU1_DACPD1.340e-6353.19Proteasome subunit beta n=1 Tax=Dacryopinax primog... [more]
A0A075AMK2_ROZAC1.470e-6350.79Proteasome subunit beta n=1 Tax=Rozella allomycis ... [more]
A0A146I3C2_MYCCL1.670e-6354.26Proteasome subunit beta n=4 Tax=Mycena TaxID=41247... [more]
A0A8H4QZF2_9AGAR1.720e-6353.33Proteasome subunit beta n=1 Tax=Agrocybe pediades ... [more]
F2U198_SALR51.780e-6353.76Proteasome subunit beta n=1 Tax=Salpingoeca rosett... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000243Peptidase T1A, proteasome beta-subunitPRINTSPR00141PROTEASOMEcoord: 57..72
score: 57.24
coord: 178..189
score: 61.36
coord: 214..225
score: 54.73
coord: 189..200
score: 28.98
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10coord: 50..247
e-value: 2.7E-67
score: 228.2
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 41..236
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 49..227
e-value: 2.9E-39
score: 134.5
IPR037559Proteasome subunit beta Pre3PANTHERPTHR11599:SF4PROTEASOME SUBUNIT BETA TYPEcoord: 44..239
NoneNo IPR availablePANTHERPTHR11599PROTEASOME SUBUNIT ALPHA/BETAcoord: 44..239
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 49..258
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..27
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..48
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..13
NoneNo IPR availableTMHMMTMhelixcoord: 20..42
IPR023333Proteasome B-type subunitPROSITEPS51476PROTEASOME_BETA_2coord: 49..228
score: 41.247

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig994contigF-serratus_M_contig994:257211..260140 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig994.21233.1mRNA_F-serratus_M_contig994.21233.1Fucus serratus malemRNAF-serratus_M_contig994 255699..260171 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig994.21233.1 ID=prot_F-serratus_M_contig994.21233.1|Name=mRNA_F-serratus_M_contig994.21233.1|organism=Fucus serratus male|type=polypeptide|length=259bp
MVKGNALYLFIFTTVSWSQSTFRMSLGIFGLMVLMPTLCMLLSTRDVLAT
TVVAARFQDGVVIGADSRTSQGNFVANRLTDKITPIYPGIFLARSGSSAD
SQFVAGVVEAKLEAYRTEFGRAPTVRVAATISRNLCYNNKDQLSAGVICA
GWDPREGGSVFSIPQGGSLLELPFAISGSGSVYALGYCDDHLRPGLGRDE
CVLHVQKALEMALSRDGASGGIIRMCVATRAGVERWTVAPGLLQQRREAG
RTPGDGGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000243Pept_T1A_subB
IPR029055Ntn_hydrolases_N
IPR001353Proteasome_sua/b
IPR037559Proteasome_beta_Pre3
IPR023333Proteasome_suB-type