prot_F-serratus_M_contig994.21231.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig994.21231.1
Unique Nameprot_F-serratus_M_contig994.21231.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length293
Homology
BLAST of mRNA_F-serratus_M_contig994.21231.1 vs. uniprot
Match: A0A3Q3EDN8_9LABR (CAF1C_H4-bd domain-containing protein n=1 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3EDN8_9LABR)

HSP 1 Score: 232 bits (592), Expect = 9.700e-72
Identity = 111/183 (60.66%), Postives = 134/183 (73.22%), Query Frame = 0
Query:   60 EERIITEEYKVWKKNTPFLYDVVMTHALEWPSLTVQWLPSVKTQESKDYAVHKLILGTHTSGSEQNYLMVANVNLPVAGVDIDNRTYDDEKGEMGGFGGVHGKVEVTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPANSECRPGAPMQGTQQGRLWPELEPACGGTLV 242
            EER+I EEYK+WKKNTPFLYD+VMTHALEWPSLTVQWLP V   E KDYAVH+L LGTHTS  EQN+L++A+V +P      D   YD EKGE GGFG V GK+E+ +KINH+GEVNRARYMPQN  +IATK+P++DV VFD +KHPS P  + EC P   ++G Q+        P   G L+
Sbjct:   12 EERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDYAVHRLALGTHTS-DEQNHLVIASVQVPNDDAQFDASQYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECHPDLRLKGHQKEGYGLSWNPNLSGNLL 193          
BLAST of mRNA_F-serratus_M_contig994.21231.1 vs. uniprot
Match: CAF1_DROME (Chromatin assembly factor 1 p55 subunit n=116 Tax=Arthropoda TaxID=6656 RepID=CAF1_DROME)

HSP 1 Score: 236 bits (602), Expect = 1.010e-71
Identity = 117/196 (59.69%), Postives = 143/196 (72.96%), Query Frame = 0
Query:   51 RSNSAHEQ----AEERIITEEYKVWKKNTPFLYDVVMTHALEWPSLTVQWLPSVKTQESKDYAVHKLILGTHTSGSEQNYLMVANVNLPVAGVDIDNRTYDDEKGEMGGFGGVHGKVEVTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPANSECRPGAPMQGTQQGRLWPELEPACGGTLV 242
            RS++A E      EER+I EEYK+WKKNTPFLYD+VMTHALEWPSLT QWLP V  Q+ KDY+VH+LILGTHTS  EQN+L++A+V LP      D   YD+EKGE GGFG V GK+E+ +KINH+GEVNRARYMPQN  VIATK+PS+DV VFD +KHPS P  + EC+P   ++G Q+        P   G L+
Sbjct:    4 RSDNAAESFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTS-DEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLL 198          
BLAST of mRNA_F-serratus_M_contig994.21231.1 vs. uniprot
Match: A0A8D3D658_SCOMX (CAF1C_H4-bd domain-containing protein n=2 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A8D3D658_SCOMX)

HSP 1 Score: 234 bits (598), Expect = 1.130e-71
Identity = 109/172 (63.37%), Postives = 135/172 (78.49%), Query Frame = 0
Query:   55 AHEQAEERIITEEYKVWKKNTPFLYDVVMTHALEWPSLTVQWLPSVKTQESKDYAVHKLILGTHTSGSEQNYLMVANVNLPVAGVDIDNRTYDDEKGEMGGFGGVHGKVEVTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPANSECRPGAPMQGTQQ 226
            A ++ EER+  EEYK+WKKNTPFLYD+VMTHALEWPSLT QWLP V   E KDY+VH+L+LGTHTS  EQN+L++A+V LP     +D   YD EKGE GGFG V GK+E+ +KINH+GEVNRARYMPQN  +IATK+P++DV VFD +KHPS P A+ ECRP   ++G Q+
Sbjct:    2 ADKEVEERVTNEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVSRPEGKDYSVHRLVLGTHTS-DEQNHLVIASVQLPNDDAQLDASHYDSEKGEFGGFGSVTGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDASGECRPDLRLRGHQK 172          
BLAST of mRNA_F-serratus_M_contig994.21231.1 vs. uniprot
Match: A0A5N5TJX5_9CRUS (Putative histone-binding protein Caf1 n=2 Tax=Armadillidium TaxID=13346 RepID=A0A5N5TJX5_9CRUS)

HSP 1 Score: 234 bits (598), Expect = 1.160e-71
Identity = 112/198 (56.57%), Postives = 143/198 (72.22%), Query Frame = 0
Query:   45 LAAQQARSNSAHEQAEERIITEEYKVWKKNTPFLYDVVMTHALEWPSLTVQWLPSVKTQESKDYAVHKLILGTHTSGSEQNYLMVANVNLPVAGVDIDNRTYDDEKGEMGGFGGVHGKVEVTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPANSECRPGAPMQGTQQGRLWPELEPACGGTLV 242
            ++ +++  ++  +  EER+I EEYK+WKKNTPFLYD+VMTHALEWPSLT QWLP V   E KDY++H+LILGTHTS  EQN+L++A+V LP      D   YD+EKGE GGFG V GK+E+ +KINH+GEVNRARYMPQN  VIATK+PS+DV VFD +KHPS P  + EC P   ++G Q+        P   G L+
Sbjct:    1 MSEKESNKDNFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTS-DEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPEPSGECHPDLRLRGHQKEGYGLSWNPNLNGYLL 197          
BLAST of mRNA_F-serratus_M_contig994.21231.1 vs. uniprot
Match: A0A850X3S6_PIACA (RBBP4 protein (Fragment) n=2 Tax=Bilateria TaxID=33213 RepID=A0A850X3S6_PIACA)

HSP 1 Score: 230 bits (586), Expect = 1.400e-71
Identity = 109/183 (59.56%), Postives = 134/183 (73.22%), Query Frame = 0
Query:   60 EERIITEEYKVWKKNTPFLYDVVMTHALEWPSLTVQWLPSVKTQESKDYAVHKLILGTHTSGSEQNYLMVANVNLPVAGVDIDNRTYDDEKGEMGGFGGVHGKVEVTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPANSECRPGAPMQGTQQGRLWPELEPACGGTLV 242
            EER+I EEYK+WKKNTPFLYD+VMTHALEWPSLT QWLP V   E KD+++H+L+LGTHTS  EQN+L++A+V LP      D   YD EKGE GGFG V GK+E+ +KINH+GEVNRARYMPQN  +IATK+PS+DV VFD +KHPS P  + EC P   ++G Q+        P   G L+
Sbjct:   12 EERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTS-DEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLL 193          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig994.21231.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3Q3EDN8_9LABR9.700e-7260.66CAF1C_H4-bd domain-containing protein n=1 Tax=Labr... [more]
CAF1_DROME1.010e-7159.69Chromatin assembly factor 1 p55 subunit n=116 Tax=... [more]
A0A8D3D658_SCOMX1.130e-7163.37CAF1C_H4-bd domain-containing protein n=2 Tax=Scop... [more]
A0A5N5TJX5_9CRUS1.160e-7156.57Putative histone-binding protein Caf1 n=2 Tax=Arma... [more]
A0A850X3S6_PIACA1.400e-7159.56RBBP4 protein (Fragment) n=2 Tax=Bilateria TaxID=3... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022052Histone-binding protein RBBP4, N-terminalPFAMPF12265CAF1C_H4-bdcoord: 66..135
e-value: 3.9E-29
score: 100.7
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 49..244
e-value: 2.9E-52
score: 180.1
NoneNo IPR availablePANTHERPTHR22850:SF82HISTONE-BINDING PROTEIN RBBP7coord: 54..226
NoneNo IPR availablePANTHERPTHR22850WD40 REPEAT FAMILYcoord: 54..226

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig994contigF-serratus_M_contig994:105079..114354 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig994.21231.1mRNA_F-serratus_M_contig994.21231.1Fucus serratus malemRNAF-serratus_M_contig994 100944..114446 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig994.21231.1 ID=prot_F-serratus_M_contig994.21231.1|Name=mRNA_F-serratus_M_contig994.21231.1|organism=Fucus serratus male|type=polypeptide|length=293bp
MASSEGIESQTGSESTPTPAATAAAAAVAASAAADVEATAAADALAAQQA
RSNSAHEQAEERIITEEYKVWKKNTPFLYDVVMTHALEWPSLTVQWLPSV
KTQESKDYAVHKLILGTHTSGSEQNYLMVANVNLPVAGVDIDNRTYDDEK
GEMGGFGGVHGKVEVTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVF
DISKHPSVPPANSECRPGAPMQGTQQGRLWPELEPACGGTLVVGKRRRPG
VLLGPQRSGPDRERHANIRGAHLGRGRRGVAPAQPEALRLRR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022052Histone-bd_RBBP4_N
IPR015943WD40/YVTN_repeat-like_dom_sf