mRNA_F-serratus_M_contig994.21231.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig994.21231.1
Unique NamemRNA_F-serratus_M_contig994.21231.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig994.21231.1 vs. uniprot
Match: A0A6H5JAT4_9PHAE (CAF1C_H4-bd domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAT4_9PHAE)

HSP 1 Score: 423 bits (1088), Expect = 6.630e-134
Identity = 208/280 (74.29%), Postives = 222/280 (79.29%), Query Frame = 1 
Query:  691 SISPSTPACRQRIASVDQEHRCKGHSKEGYGLSWNPHVEGRLLSGSDDGLVCYWDLKGAGQTVNATQTFEGHTSVVGDVAWHQHNPKLFGSVGDDKQLLFWDTTMDGAKPTTVISEAHSANINCLAFNPFNEFLLATGSSDTSVALWDMRNMGKPMHKLERHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----IGEEQTPEDAEDGPPELLFIHGGHTSRVGDFSWNPNDDWVCASVSEDNILQVWQMAENIYAEEVEND-DPDEIEDQELED 1512
            S+ PS   CR        EHRCKGH+KEGYGLSWNPHVEGRLLSGSDDGLVCYWD+KGAGQTV+ATQ FEGHTSVVGDVAWHQ NPKL GSVGDD+QLLFWDT+MDG+KPTTVI +AHSANINCLAFNPF+EFLLATGSSDT+VALWDMRNMGKPMH LERH                                      IGEEQ+PEDAEDGPPELLFIHGGHTSRVGDFSWN NDDWVCASVSEDNILQVWQMAENIYAEE EN+ DPDE+EDQ+LED
Sbjct:  230 SVPPSNSGCRP-------EHRCKGHTKEGYGLSWNPHVEGRLLSGSDDGLVCYWDIKGAGQTVDATQKFEGHTSVVGDVAWHQQNPKLLGSVGDDRQLLFWDTSMDGSKPTTVIKDAHSANINCLAFNPFSEFLLATGSSDTTVALWDMRNMGKPMHLLERHSSEAGDGEVLGVQWASFDETILGSCSADRRVKVWSLSRIGEEQSPEDAEDGPPELLFIHGGHTSRVGDFSWNMNDDWVCASVSEDNILQVWQMAENIYAEEAENEEDPDEVEDQDLED 502
[Close]
BLAST of mRNA_F-serratus_M_contig994.21231.1 vs. uniprot
Match: A0A0P1A618_PLAHL (Histone-binding protein rbbp4 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A618_PLAHL)

HSP 1 Score: 292 bits (747), Expect = 2.770e-85
Identity = 168/275 (61.09%), Postives = 210/275 (76.36%), Query Frame = 1 
Query:  688 FSISPSTPACRQRIASVDQEHRCKGHSKEGYGLSWNPHVEGRLLSGSDDGLVCYWDLKGAGQTVNATQTFEGHTSVVGDVAWHQHNPKLFGSVGDDKQLLFWDTTMDGA-KPTTVISEAHSANINCLAFNPFNEFLLATGSSDTSVALWDMRNMGKPMHKLERHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGEEQTPEDAEDGPPELLFIHGGHTSRVGDFSWNPNDDWVCASVSEDNILQVWQMAENIYAEEVENDDPDEIEDQELE 1509
            F+IS   P+  ++ +  D ++R  GHSKEGYGL W+PH    L+SGSDD ++C WD+  AG+++     + GH  V+ DVAWH HN K+FGSVGDDK+LL WD   +   KP T++  AH+A +NCLAF+PF+E+L+ATGS+D  V LWDMRNM   +H  E H  XXXXXXXXXXXXXXXXXXXXXXXXXXXX   IG+EQTPEDAEDGPPELLFIHGGHTS++ DFSWNPND WV ASV+EDN+LQ+WQMAENIY EE E +  +E+ +++LE
Sbjct:  165 FNIS-KRPSQPEQNSGCDPDYRLLGHSKEGYGLCWDPHQPFHLISGSDDAIICEWDISNAGKSLEPLHKYSGHCDVIEDVAWHMHNTKIFGSVGDDKKLLIWDMRSESFDKPATIVY-AHTAEVNCLAFSPFSEYLIATGSADKHVNLWDMRNMKAKLHSFEGHNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSKIGDEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPNDPWVVASVAEDNVLQIWQMAENIYNEEDETEQ-EEVAEEDLE 436
[Close]
BLAST of mRNA_F-serratus_M_contig994.21231.1 vs. uniprot
Match: A0A067C0K8_SAPPC (Histone-binding protein RBBP4 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C0K8_SAPPC)

HSP 1 Score: 291 bits (744), Expect = 6.370e-85
Identity = 171/267 (64.04%), Postives = 206/267 (77.15%), Query Frame = 1 
Query:  688 FSIS--PSTPACRQRIASVDQEHRCKGHSKEGYGLSWNPHVEGRLLSGSDDGLVCYWDLKGAGQTVNATQTFEGHTSVVGDVAWHQHNPKLFGSVGDDKQLLFWDTTMDGA-KPTTVISEAHSANINCLAFNPFNEFLLATGSSDTSVALWDMRNMGKPMHKLERHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGEEQTPEDAEDGPPELLFIHGGHTSRVGDFSWNPNDDWVCASVSEDNILQVWQMAENIYAEEVENDD 1479
            F IS  PSTPA        + ++R  GH+KEGYGL W+PH    L+SGSDDG+VC WDL  AG+TV     + GHT ++ DVAWH H+ KLFGSVGDDK+LL WD  +    KP T I+ AH + +NC++F+PF+E+LLATGSSD +V LWDMRN+   +H    H XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  IGEEQ+PEDAEDGPPELLFIHGGHT+++ DFSWNPND WV ASV+EDN+LQ+WQMAENIY EE +++D
Sbjct:  160 FDISKHPSTPA---EGTGCNPDYRLLGHTKEGYGLCWDPHQAHHLISGSDDGVVCEWDLANAGKTVQPLNKYTGHTDIIEDVAWHMHHQKLFGSVGDDKKLLIWDMRLKSYDKPMTSIN-AHDSEVNCVSFSPFSEYLLATGSSDKTVNLWDMRNLSSKLHTFSGHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNDPWVVASVAEDNVLQIWQMAENIYNEEADDED 422
[Close]
BLAST of mRNA_F-serratus_M_contig994.21231.1 vs. uniprot
Match: H3G6T4_PHYRM (CAF1C_H4-bd domain-containing protein n=22 Tax=Peronosporaceae TaxID=4777 RepID=H3G6T4_PHYRM)

HSP 1 Score: 285 bits (728), Expect = 6.550e-83
Identity = 162/255 (63.53%), Postives = 197/255 (77.25%), Query Frame = 1 
Query:  709 PACRQRIASVDQEHRCKGHSKEGYGLSWNPHVEGRLLSGSDDGLVCYWDLKGAGQTVNATQTFEGHTSVVGDVAWHQHNPKLFGSVGDDKQLLFWDTTMDGA-KPTTVISEAHSANINCLAFNPFNEFLLATGSSDTSVALWDMRNMGKPMHKLERHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGEEQTPEDAEDGPPELLFIHGGHTSRVGDFSWNPNDDWVCASVSEDNILQVWQMAENIYAEEVE 1470
            P+  +  +  + + R  GH+KEGYGL W+PH    L+SGSDD ++C WDL+ AG+TV     + GH+ V+ DVAWH H+ K+FGSVGDDK+LL WD   +   KP T +  AH+A +NCLAF+PF+E+L+ATGS+D  V LWDMRNM   +H  E H XXXXXXXXXXXXXXXXXXXXXXXXXXXXX   IG+EQ+PEDAEDGPPELLFIHGGHTS++ DFSWNPND WV ASV+EDN+LQ+WQMAENIY EE E
Sbjct:  157 PSQPEENSGCNPDFRLLGHTKEGYGLCWDPHQPFHLISGSDDAIICEWDLRNAGKTVQPLHKYSGHSDVIEDVAWHMHHTKIFGSVGDDKKLLIWDMRSESYDKPATTVY-AHTAEVNCLAFSPFSEYLVATGSADKHVNLWDMRNMKAKLHSFEGHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSKIGDEQSPEDAEDGPPELLFIHGGHTSKISDFSWNPNDPWVMASVAEDNVLQIWQMAENIYNEEDE 410
[Close]
BLAST of mRNA_F-serratus_M_contig994.21231.1 vs. uniprot
Match: A0A2D4BXC7_PYTIN (CAF1C_H4-bd domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXC7_PYTIN)

HSP 1 Score: 281 bits (720), Expect = 2.500e-81
Identity = 166/269 (61.71%), Postives = 205/269 (76.21%), Query Frame = 1 
Query:  709 PACRQRIASVDQEHRCKGHSKEGYGLSWNPHVEGRLLSGSDDGLVCYWDLKGAGQTVNATQTFEGHTSVVGDVAWHQHNPKLFGSVGDDKQLLFWDTTMDGA-KPTTVISEAHSANINCLAFNPFNEFLLATGSSDTSVALWDMRNMGKPMHKLERHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGEEQTPEDAEDGPPELLFIHGGHTSRVGDFSWNPNDDWVCASVSEDNILQVWQMAENIYAEEVENDDP-DEIEDQELE 1509
            P+  +  A  + + R  GHSKEGYGL W+PH    L+SGSDD ++C WD+  AG+TV+    + GHT V+ DVAWH H+ K+FGSVGDDK+LL WD       KP TV+  AHSA +NCLAF+PF+E+L+ATGS+D  V LWDMRNM   +H  E HXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   IG+EQ+ EDAEDGPPELLFIHGGHT+++ DFSWN  + WV ASV+EDN+LQ+WQMAENIY EE +N++  D++ + ELE
Sbjct:  179 PSQPEENAGSEPDFRLLGHSKEGYGLCWDPHESLHLISGSDDAVICEWDITNAGKTVDPLHKYTGHTDVIEDVAWHMHHKKIFGSVGDDKKLLIWDMRSQSYDKPATVVY-AHSAEVNCLAFSPFSEYLIATGSADKVVNLWDMRNMKAKLHSFEGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSKIGDEQSAEDAEDGPPELLFIHGGHTAKISDFSWNAQEPWVVASVAEDNVLQIWQMAENIYNEEDDNENENDDVREDELE 446
[Close]
BLAST of mRNA_F-serratus_M_contig994.21231.1 vs. uniprot
Match: A0A7S3HKK7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HKK7_9STRA)

HSP 1 Score: 281 bits (719), Expect = 4.000e-81
Identity = 152/237 (64.14%), Postives = 180/237 (75.95%), Query Frame = 1 
Query:  745 EHRCKGHSKEGYGLSWNPHVEGRLLSGSDDGLVCYWDLKGAGQTVNATQTFEGHTSVVGDVAWHQHNPKLFGSVGDDKQLLFWDTTMDGAKPTTVISEAHSANINCLAFNPFNEFLLATGSSDTSVALWDMRNMGKPMHKLERHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGEEQTPEDAEDGPPELLFIHGGHTSRVGDFSWNPNDDWVCASVSEDNILQVWQMAENIY 1455
            +HRC GH+ +GYGL+W+P   GRLLSGSDD  VC WDL  AG  V A Q   GHTSVV DVAW  H   ++ SVGDD QLL WD       P+  + +AH+++INC++FNP NEFLLATGS+D++V LWD+RNM + +H  E H         XXXXXXXXXXXXXXXXXXXXXX  IGEEQ+PEDAEDGPPELLFIHGGHT++V DFSWN N++WV ASVSEDNILQ+WQMAE+IY
Sbjct:  177 QHRCLGHTAQGYGLAWSPLTTGRLLSGSDDATVCMWDLTEAGTEVQALQIKRGHTSVVEDVAWSHHQSHVYASVGDDMQLLIWDARDSSDSPSKRVQKAHTSDINCVSFNPLNEFLLATGSTDSTVGLWDLRNMTQKLHSFEGHKGGVYQLDWXXXXXXXXXXXXXXXXXXXXXXSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNRNEEWVAASVSEDNILQIWQMAESIY 413
[Close]
BLAST of mRNA_F-serratus_M_contig994.21231.1 vs. uniprot
Match: A0A3F2RWG3_9STRA (CAF1C_H4-bd domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RWG3_9STRA)

HSP 1 Score: 288 bits (738), Expect = 4.460e-81
Identity = 163/258 (63.18%), Postives = 201/258 (77.91%), Query Frame = 1 
Query:  739 DQEHRCKGHSKEGYGLSWNPHVEGRLLSGSDDGLVCYWDLKGAGQTVNATQTFEGHTSVVGDVAWHQHNPKLFGSVGDDKQLLFWDTTMDGA-KPTTVISEAHSANINCLAFNPFNEFLLATGSSDTSVALWDMRNMGKPMHKLERHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGEEQTPEDAEDGPPELLFIHGGHTSRVGDFSWNPNDDWVCASVSEDNILQVWQMAENIYAEEVENDDPDEIEDQELE 1509
            + ++R  GH+KEGYGL W+PH    L+SGSDD ++C WD++ AG+TV     + GH+ V+ DVAWH H+ K+FGSVGDDK+LL WD   +   KP T +  AH+A +NCLAF+PF+E+L+ATGS+D  V LWDMRNM   +H  E H XXXXXXXXXXXXXXXXXXXXXXXXXXXXX   IG+EQ+PEDAEDGPPELLFIHGGHTS++ DFSWNPND WV ASV+EDN+LQ+WQMAENIY EE E  +  E+ + EL+
Sbjct:  188 EPDYRLLGHTKEGYGLCWDPHEAYHLISGSDDAIICEWDIRNAGKTVQPLHKYSGHSDVIEDVAWHMHHVKIFGSVGDDKKLLIWDMRSESYDKPATTVY-AHTAEVNCLAFSPFSEYLVATGSADKHVNLWDMRNMKAKLHSFEGHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSKIGDEQSPEDAEDGPPELLFIHGGHTSKISDFSWNPNDPWVVASVAEDNVLQIWQMAENIYNEEDEEAEQQEVAEDELD 444
[Close]
BLAST of mRNA_F-serratus_M_contig994.21231.1 vs. uniprot
Match: A0A3M6VM31_9STRA (CAF1C_H4-bd domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VM31_9STRA)

HSP 1 Score: 285 bits (729), Expect = 5.010e-80
Identity = 162/258 (62.79%), Postives = 198/258 (76.74%), Query Frame = 1 
Query:  709 PACRQRIASVDQEHRCKGHSKEGYGLSWNPHVEGRLLSGSDDGLVCYWDLKGAGQTVNATQTFEGHTSVVGDVAWHQHNPKLFGSVGDDKQLLFWDTTMDGA-KPTTVISEAHSANINCLAFNPFNEFLLATGSSDTSVALWDMRNMGKPMHKLERHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGEEQTPEDAEDGPPELLFIHGGHTSRVGDFSWNPNDDWVCASVSEDNILQVWQMAENIYAEEVENDD 1479
            P+  +  +  D + R  GH+KEGYGL W+PH    L+SGSDD ++C WD++ AG+TV     + GH+ V+ DVAWH H+ K+FGSVGDDK+LL WD   +   KP T +  AH+A +NCLAF+PF+E+L+ATGS+D  V LWDMRNM   +H  E H XXXXXXXXXXXXXXXXXXXXXXXXXXXXX   IG+EQ+PEDAEDGPPELLFIHGGHTS++ DFSWNPND W+ ASV+EDN+LQ+WQMAENIY EE E  D
Sbjct:  180 PSQPEENSGSDPDFRLLGHTKEGYGLCWDPHQPFHLISGSDDAVICEWDIRNAGKTVQPLHKYSGHSDVIEDVAWHMHHTKIFGSVGDDKKLLIWDMRSESYDKPATTVY-AHTAEVNCLAFSPFSEYLVATGSADKHVNLWDMRNMKAKLHSFEGHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSKIGDEQSPEDAEDGPPELLFIHGGHTSKISDFSWNPNDPWMVASVAEDNVLQIWQMAENIYNEEDEETD 436
[Close]
BLAST of mRNA_F-serratus_M_contig994.21231.1 vs. uniprot
Match: A0A6A3MGH0_9STRA (Histone-binding protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3MGH0_9STRA)

HSP 1 Score: 290 bits (743), Expect = 7.430e-80
Identity = 166/268 (61.94%), Postives = 205/268 (76.49%), Query Frame = 1 
Query:  709 PACRQRIASVDQEHRCKGHSKEGYGLSWNPHVEGRLLSGSDDGLVCYWDLKGAGQTVNATQTFEGHTSVVGDVAWHQHNPKLFGSVGDDKQLLFWDTTMDGA-KPTTVISEAHSANINCLAFNPFNEFLLATGSSDTSVALWDMRNMGKPMHKLERHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGEEQTPEDAEDGPPELLFIHGGHTSRVGDFSWNPNDDWVCASVSEDNILQVWQMAENIYAEEVENDDPDEIEDQELE 1509
            P+  +  +  D + R  GHSKEGYGL W+PH    L+SGSDD ++C WD++ AG+TV     + GH+ V+ DVAWH H+ K+FGSVGDDK+LL WD   +   KP T +  AH+A +NCLAF+PF+E+L+ATGS+D  V LWDMRNM   +H  E H XXXXXXXXXXXXXXXXXXXXXXXXXXXXX   IG+EQ+PEDAEDGPPELLFIHGGHTS++ DFSWNPND WV ASV+EDN+LQ+WQMAENIY EE E  +  E+ +++LE
Sbjct:  183 PSQPEENSGSDPDFRLLGHSKEGYGLCWDPHEPFHLISGSDDAVICEWDIRNAGKTVQPLHKYSGHSDVIEDVAWHMHHTKIFGSVGDDKKLLIWDMRSESYDKPATTVY-AHTAEVNCLAFSPFSEYLVATGSADKHVNLWDMRNMKAKLHSFEGHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSKIGDEQSPEDAEDGPPELLFIHGGHTSKISDFSWNPNDAWVVASVAEDNVLQIWQMAENIYNEEDEETEQAEVAEEDLE 449
[Close]
BLAST of mRNA_F-serratus_M_contig994.21231.1 vs. uniprot
Match: A0A662XCD8_9STRA (CAF1C_H4-bd domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XCD8_9STRA)

HSP 1 Score: 278 bits (710), Expect = 1.240e-79
Identity = 167/275 (60.73%), Postives = 204/275 (74.18%), Query Frame = 1 
Query:  709 PACRQRIASVDQEHRCKGHSKEGYGLSWNPHVEGRLLSGSDDGLVCYWDLKGAGQTVNATQTFEGHTSVVGDVAWHQHNPKLFGSVGDDKQLL-------FWDTTMDGA-KPTTVISEAHSANINCLAFNPFNEFLLATGSSDTSVALWDMRNMGKPMHKLERHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGEEQTPEDAEDGPPELLFIHGGHTSRVGDFSWNPNDDWVCASVSEDNILQVWQMAENIYAEEVENDDPDEIEDQELE 1509
            P+  +  +  D ++R  GH+KEGYGL W+PH    L+SGSDD ++C WD++ AG+TV     + GH+ V+ DVAWH H+ K+FGSVGDDK+LL       FWD   +   KP T +  AH+A +NCLAF+PF+E+LLATGS+D  V LWDMRNM   +H  E HXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      +Q PEDAEDGPPELLFIHGGHTS++ DFSWNPND WV ASV+EDN+LQ+WQMAENIY EE E  + +EI + ELE
Sbjct:  200 PSQPEENSGSDPDYRLLGHTKEGYGLCWDPHEAYHLISGSDDAVICEWDIRNAGKTVEPLHKYSGHSDVIEDVAWHMHHKKIFGSVGDDKKLLMYDVLLAFWDMRSESYNKPVTTVY-AHTAEVNCLAFSPFSEYLLATGSADKHVNLWDMRNMKAKLHSFEGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL----SKQAPEDAEDGPPELLFIHGGHTSKISDFSWNPNDPWVVASVAEDNVLQIWQMAENIYNEEEEEAEHEEIAEDELE 469
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig994.21231.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAT4_9PHAE6.630e-13474.29CAF1C_H4-bd domain-containing protein n=1 Tax=Ecto... [more]
A0A0P1A618_PLAHL2.770e-8561.09Histone-binding protein rbbp4 n=1 Tax=Plasmopara h... [more]
A0A067C0K8_SAPPC6.370e-8564.04Histone-binding protein RBBP4 n=4 Tax=Saprolegniac... [more]
H3G6T4_PHYRM6.550e-8363.53CAF1C_H4-bd domain-containing protein n=22 Tax=Per... [more]
A0A2D4BXC7_PYTIN2.500e-8161.71CAF1C_H4-bd domain-containing protein n=1 Tax=Pyth... [more]
A0A7S3HKK7_9STRA4.000e-8164.14Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A3F2RWG3_9STRA4.460e-8163.18CAF1C_H4-bd domain-containing protein n=2 Tax=Phyt... [more]
A0A3M6VM31_9STRA5.010e-8062.79CAF1C_H4-bd domain-containing protein n=1 Tax=Pero... [more]
A0A6A3MGH0_9STRA7.430e-8061.94Histone-binding protein n=4 Tax=Phytophthora fraga... [more]
A0A662XCD8_9STRA1.240e-7960.73CAF1C_H4-bd domain-containing protein n=2 Tax=Noth... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig994contigF-serratus_M_contig994:100944..114446 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score239.6
Seed ortholog evalue1.9e-60
Seed eggNOG ortholog157072.XP_008873082.1
Preferred nameRBBP4
KEGG koko:K10752,ko:K11659
KEGG Pathwayko04218,map04218
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000070,GO:0000118,GO:0000122,GO:0000228,GO:0000278,GO:0000280,GO:0000281,GO:0000775,GO:0000776,GO:0000777,GO:0000778,GO:0000779,GO:0000780,GO:0000785,GO:0000790,GO:0000793,GO:0000794,GO:0000819,GO:0000910,GO:0000976,GO:0000977,GO:0000978,GO:0000987,GO:0001012,GO:0001067,GO:0001558,GO:0001708,GO:0002064,GO:0002065,GO:0002066,GO:0002244,GO:0002376,GO:0002520,GO:0003002,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003824,GO:0004407,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005694,GO:0005700,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006277,GO:0006281,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006335,GO:0006336,GO:0006338,GO:0006342,GO:0006351,GO:0006355,GO:0006357,GO:0006464,GO:0006473,GO:0006475,GO:0006476,GO:0006479,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007076,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007304,GO:0007306,GO:0007307,GO:0007346,GO:0007379,GO:0007389,GO:0007548,GO:0008150,GO:0008152,GO:0008213,GO:0008283,GO:0008284,GO:0008285,GO:0008406,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009611,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010286,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010564,GO:0010605,GO:0010629,GO:0010927,GO:0010948,GO:0014070,GO:0016043,GO:0016070,GO:0016458,GO:0016569,GO:0016570,GO:0016571,GO:0016573,GO:0016575,GO:0016580,GO:0016581,GO:0016584,GO:0016589,GO:0016787,GO:0016810,GO:0016811,GO:0017053,GO:0018130,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019213,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019899,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0030097,GO:0030154,GO:0030261,GO:0030308,GO:0030703,GO:0030707,GO:0030855,GO:0031010,GO:0031055,GO:0031099,GO:0031101,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031497,GO:0031519,GO:0031523,GO:0031974,GO:0031981,GO:0032221,GO:0032259,GO:0032501,GO:0032502,GO:0032504,GO:0032774,GO:0032989,GO:0032991,GO:0033186,GO:0033554,GO:0033558,GO:0033698,GO:0033993,GO:0034080,GO:0034508,GO:0034605,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034708,GO:0034723,GO:0034724,GO:0034728,GO:0035035,GO:0035097,GO:0035098,GO:0035239,GO:0035282,GO:0035295,GO:0035601,GO:0036211,GO:0040007,GO:0040008,GO:0040029,GO:0040035,GO:0042060,GO:0042127,GO:0042221,GO:0042246,GO:0042393,GO:0042766,GO:0042802,GO:0042803,GO:0042826,GO:0043044,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0043486,GO:0043543,GO:0043565,GO:0043687,GO:0043933,GO:0044085,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044703,GO:0045137,GO:0045138,GO:0045165,GO:0045786,GO:0045814,GO:0045892,GO:0045926,GO:0045934,GO:0046483,GO:0046661,GO:0046689,GO:0046983,GO:0048285,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048545,GO:0048546,GO:0048557,GO:0048562,GO:0048565,GO:0048566,GO:0048568,GO:0048589,GO:0048598,GO:0048608,GO:0048609,GO:0048646,GO:0048731,GO:0048806,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0051301,GO:0051382,GO:0051383,GO:0051704,GO:0051716,GO:0051726,GO:0055123,GO:0060255,GO:0060429,GO:0061458,GO:0061640,GO:0061641,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0070176,GO:0070210,GO:0070316,GO:0070317,GO:0070370,GO:0070603,GO:0070822,GO:0070925,GO:0071103,GO:0071704,GO:0071824,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090545,GO:0090568,GO:0090571,GO:0090598,GO:0097159,GO:0097659,GO:0098654,GO:0098687,GO:0098732,GO:0098813,GO:0140014,GO:0140096,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1902494,GO:1902679,GO:1903047,GO:1903506,GO:1903507,GO:1904949,GO:1990234,GO:1990483,GO:1990837,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.chromatin organization
EggNOG OGsKOG0264@1,KOG0264@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036
Exons8
Model size3161
Cds size879
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig994.21231.1prot_F-serratus_M_contig994.21231.1Fucus serratus malepolypeptideF-serratus_M_contig994 105079..114354 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932791.6947215-UTR-F-serratus_M_contig994:100943..1027341622932791.6947215-UTR-F-serratus_M_contig994:100943..102734Fucus serratus maleUTRF-serratus_M_contig994 100944..102734 -
1690964477.693865-UTR-F-serratus_M_contig994:100943..1027341690964477.693865-UTR-F-serratus_M_contig994:100943..102734Fucus serratus maleUTRF-serratus_M_contig994 100944..102734 -
1622932791.711191-UTR-F-serratus_M_contig994:103021..1032061622932791.711191-UTR-F-serratus_M_contig994:103021..103206Fucus serratus maleUTRF-serratus_M_contig994 103022..103206 -
1690964477.713825-UTR-F-serratus_M_contig994:103021..1032061690964477.713825-UTR-F-serratus_M_contig994:103021..103206Fucus serratus maleUTRF-serratus_M_contig994 103022..103206 -
1622932791.725827-UTR-F-serratus_M_contig994:103729..1038761622932791.725827-UTR-F-serratus_M_contig994:103729..103876Fucus serratus maleUTRF-serratus_M_contig994 103730..103876 -
1690964477.7244623-UTR-F-serratus_M_contig994:103729..1038761690964477.7244623-UTR-F-serratus_M_contig994:103729..103876Fucus serratus maleUTRF-serratus_M_contig994 103730..103876 -
1622932791.8052173-UTR-F-serratus_M_contig994:105011..1050781622932791.8052173-UTR-F-serratus_M_contig994:105011..105078Fucus serratus maleUTRF-serratus_M_contig994 105012..105078 -
1690964477.7334673-UTR-F-serratus_M_contig994:105011..1050781690964477.7334673-UTR-F-serratus_M_contig994:105011..105078Fucus serratus maleUTRF-serratus_M_contig994 105012..105078 -
1622932791.9132178-UTR-F-serratus_M_contig994:114354..1144461622932791.9132178-UTR-F-serratus_M_contig994:114354..114446Fucus serratus maleUTRF-serratus_M_contig994 114355..114446 -
1690964477.8108861-UTR-F-serratus_M_contig994:114354..1144461690964477.8108861-UTR-F-serratus_M_contig994:114354..114446Fucus serratus maleUTRF-serratus_M_contig994 114355..114446 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932791.8205957-CDS-F-serratus_M_contig994:105078..1051511622932791.8205957-CDS-F-serratus_M_contig994:105078..105151Fucus serratus maleCDSF-serratus_M_contig994 105079..105151 -
1690964477.750543-CDS-F-serratus_M_contig994:105078..1051511690964477.750543-CDS-F-serratus_M_contig994:105078..105151Fucus serratus maleCDSF-serratus_M_contig994 105079..105151 -
1622932791.840381-CDS-F-serratus_M_contig994:106375..1065401622932791.840381-CDS-F-serratus_M_contig994:106375..106540Fucus serratus maleCDSF-serratus_M_contig994 106376..106540 -
1690964477.7619345-CDS-F-serratus_M_contig994:106375..1065401690964477.7619345-CDS-F-serratus_M_contig994:106375..106540Fucus serratus maleCDSF-serratus_M_contig994 106376..106540 -
1622932791.8606071-CDS-F-serratus_M_contig994:107253..1074081622932791.8606071-CDS-F-serratus_M_contig994:107253..107408Fucus serratus maleCDSF-serratus_M_contig994 107254..107408 -
1690964477.7725904-CDS-F-serratus_M_contig994:107253..1074081690964477.7725904-CDS-F-serratus_M_contig994:107253..107408Fucus serratus maleCDSF-serratus_M_contig994 107254..107408 -
1622932791.874587-CDS-F-serratus_M_contig994:107915..1081291622932791.874587-CDS-F-serratus_M_contig994:107915..108129Fucus serratus maleCDSF-serratus_M_contig994 107916..108129 -
1690964477.7835264-CDS-F-serratus_M_contig994:107915..1081291690964477.7835264-CDS-F-serratus_M_contig994:107915..108129Fucus serratus maleCDSF-serratus_M_contig994 107916..108129 -
1622932791.8902485-CDS-F-serratus_M_contig994:114082..1143541622932791.8902485-CDS-F-serratus_M_contig994:114082..114354Fucus serratus maleCDSF-serratus_M_contig994 114083..114354 -
1690964477.7970247-CDS-F-serratus_M_contig994:114082..1143541690964477.7970247-CDS-F-serratus_M_contig994:114082..114354Fucus serratus maleCDSF-serratus_M_contig994 114083..114354 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig994.21231.1

>prot_F-serratus_M_contig994.21231.1 ID=prot_F-serratus_M_contig994.21231.1|Name=mRNA_F-serratus_M_contig994.21231.1|organism=Fucus serratus male|type=polypeptide|length=293bp
MASSEGIESQTGSESTPTPAATAAAAAVAASAAADVEATAAADALAAQQA
RSNSAHEQAEERIITEEYKVWKKNTPFLYDVVMTHALEWPSLTVQWLPSV
KTQESKDYAVHKLILGTHTSGSEQNYLMVANVNLPVAGVDIDNRTYDDEK
GEMGGFGGVHGKVEVTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVF
DISKHPSVPPANSECRPGAPMQGTQQGRLWPELEPACGGTLVVGKRRRPG
VLLGPQRSGPDRERHANIRGAHLGRGRRGVAPAQPEALRLRR*
back to top

mRNA from alignment at F-serratus_M_contig994:100944..114446-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig994.21231.1 ID=mRNA_F-serratus_M_contig994.21231.1|Name=mRNA_F-serratus_M_contig994.21231.1|organism=Fucus serratus male|type=mRNA|length=13503bp|location=Sequence derived from alignment at F-serratus_M_contig994:100944..114446- (Fucus serratus male)
TGTACCCTCTACCGGTAGATCTCGTGCTCCAGCTACTGCCCCGTTCGTCG
ATCGATCCAATATCGACTGGTCACCAACTATTCGCTGAGAAAATGGCATC
ATCAGAAGGAATTGAAAGCCAAACCGGGTCGGAATCGACGCCCACGCCCG
CCGCCACAGCTGCCGCTGCAGCTGTCGCCGCCTCTGCGGCAGCAGACGTC
GAGGCTACCGCTGCGGCAGACGCATTGGCAGCACAACAGGCTAGAAGCAA
CAGCGCTCACGAGCAGGCGGAGGAAAGGATTATCACGGAGGAGTATAAAG
TATGGAAGAAGAATACACCGTTTTTGTACGATGTGGTCATGACGCACGCG
TTGGAGTGGCCAAGGTGGGTGTACACGGGGGAAAGGCCGGGGTAACAGCA
AAAGCAAATTAGATGACTGTCGACGTTTTGACGGGCAAGTATACTCGTCT
GAATTCCCGCAATACACCGCGCAAGGTTTGGACGGTCCAGATCATCGCCC
GCGAAGACAGAGGGGCAGGCGTGCGACGACCGAGAGTGCAGTCGTCGGAT
GTGCTGTTGTTAATCACTCCGCGCGGATGTCGTTTGTGTTTTCGAAAATC
GCGCCACTTCGGGTTCAAATTTCAAACACTAGTTTATACATACTGTATAG
TATAATATTAACTGTACGACAGCAGTCGTACTTCCACTTTCCCTGGCGTC
CATCGGTTTACGGTGTGGACAGTTATCTGCCATCCAGACCTGGGTTTGCC
GCGCCCGTCAATCCACTCCATCGATATTTCTTCCTCAGTACAACGCTTAC
GAGTGATGCAGCATTCATCAGTCGTTGCATCTCCCAGAACTGTCGTACAA
TCAATCTGTTCACTAACTGTTGATGGTTTTAGGCCATGATTTTACCCTCG
GGAGCACATCCGTCTTGAACGTGAGATACCTTACTTGTAGGGTGTTGCAC
AGATTAACGGTTAATATTTGACCCTTTGCACATTTATGCCGACACACGCA
CCCATCCCCTCCACCAGAGTCCAAAGTCATCTAGGGCCGATACTAGCAGC
GCGGCCAAAAAGGCAAGAAAGTGTAAAGGGGTGAACAAACGTCGAGCGAA
ATTTGACTTGGGACGTGACGACCCTATGAGTGCAGCCACAGGGCTGCCCT
AGACTACACAAAGTACCTGAAATTCAAGTGGCCGAAAAGGCCCCAAGTGC
TTTGGCACTCCTTGAAGCTCATCCGGCCAGCACCTGTACCTCCAACAAGA
GTCCGGCACCTCCTACCTCGTTACGACAACCAGTCAAAACCAGGTGCCCG
CCGTTCCACCATATTCACGAGGTGGAGGCTAAAAGAAAACGCGCAACAGG
CATGCAGCACTTGAAAGGAACCAAACTGCTATTAATAGACCTCCAAGTAA
AGTACAGTACATTGAACGTGCGAACATAACACTATTAAATACAGTACTGT
ACGTCAATTTGAAAACATCACCGTCAGTACTCTGTGCTCTGTATACAGTG
TTTAAAGAAAATCAGAACAGCACCTAGACCTTTTGAGCATCCCCCGGTTA
GGGTGGAAAGAGTGTCAAAACGTTCAGGTGGGATCAAAGGCTGCAAACAC
ATTAAAAACCGTTCTGACCTCTATCCAGTACATTCTCTTTCTTACTCTTC
AAGGCAAAGAAACGAATTTCCGTGGTCACAGGCTAACCCAAACTTACAAT
ACAACACCAAATGATATTATTTTAGTACTGGTATAGTACTTCACTGACTG
TACCAACAGCAATAGTACGAGCCAAACAATTTAATACCAGGTATTGGTTA
TCTATTTACTTATTTTAATACGCCATACGCCATCCGGTCAGTTCCGAGTT
TATCGGGTCACGCAATTGCGTACCGATGGCGTTCACTGCCGAGAGTCCAT
CGACACAGTGCCAGTAATTCAAGGTAGTTCCAAACGAGTGCTGCCTTGGC
AGGTCGCCATGGACCAATCAATATGCGCCTCTCTTTCCCACACCCACTAT
TGATATGAAGTGGGCATGTTGAAAGTACCGGAAGACTAAGCATAAATGCT
GATTAGGTTCATACATAAAATATGTTTTAAATAATTATTTTTTTAAGTAT
TATTCGCGCAAAGCGCTCATTTTTTTTTAAGAAGCCTTTTCTTGTAAAAA
GAGAGAGAGAGGGGCATATTGGGGGTTACAAACTGGCCTTGCCTTCCGAG
ATAATGCTCGATTACATCACGATTTTTTGAACTGAAGTCCTTTGAATATA
TTGAGTGTTCGGAAAATGTTAAGTTTGGGCATGGTTTCGACATACTTGTA
TATGCTCTTCTATGCGGGGGAAATACGAAATTGCTGGAAATGGCTACGTA
CTTTTTCTTACAAGTGGGTGAGATTTGCAAGAGCAGACAAAGCTGTGGCT
CTACAAGAAGTACCACTACCCAGTAAAGCACACACACCGACGTAGGTGGA
GGTTTTGCCCCCGTCATTGTCGGTAGATGAACACAAGCACAGCCCGGCAA
GAATTCGCTACCTAATCATTTTTGAAAATCACTTCCAGAAATTAGATGAA
ATTAACAGCAGTAGTCAACAAGTAGTACACATATACGGTACCGGTATGTA
TTAGTTATGTGGCACCAAGCTCTGTACTTGACTTGCAGATGGTGATACCA
CTTCTGCTGTGTCGCCAACAAGGAGAGGAGCTCCACGGAGAGACGTATGG
AATGCAGAATCGCCGACGACACATGTATGCCTCCCTTTGAGTATGAATGA
TTTGGCTCGGCTGTTTAAGAACAACCACCGCCGTGGGTAAATGCTGAAAA
CACTGGCTTGACCTCAACGACAGATCACAGGCTCCAAGAAACGCAACCAA
CCACACACTATAGTGGGAATATACCGCCACACCAGCATGGTGCATCGATG
CTGCCGCCGGCGCGTTCGTGTGTGAGCTGCCTATACATTTTCAAGTGAAA
GGGCTCCACCGATGGTAGACCTGTAACAGAGTAATCTACAGAACCTGGGT
GCTGCTGAGACGATAATCTCATGGTACTGTGTGAAATGCACCGCGCTCTC
CTATCACCTCGTCCCGTCCTTGTCCGTCCTTATCAAATCCTTACAAGAGT
CGTGTTTCATTGGTCTAATCTGACAGCACTTCCCTGCCAGGGAGGTCTGT
GATTGGTCGGTTCTTTCAAAACTTTCTCTGCGTATGGGATTAGTGCCGCT
GATTAATATCAGTGTACACACACACACACACACACACACACACACAGTAT
AACGATGGGTTTCTCCCCGATATTGTAGTGTTGACCCTATTTGACTACAT
CGGGGAACCCTTTAAATGCCATGTAGAGTTTTTGTCTCTACGGCCAATAA
GTTGCGTTCAGAATATTTTTTAACTGATTGCACCATAAATGCATTGCATA
GATAATATTACTCATCTAGTACTAATATGCATAGTTAGATTCACCTGATA
ATAAATTATCATGAAGCAAAACGTTGTCTCCTGTCCCACCATCGGAGAAC
CCGATTAAATGCCATTACCTGTAAGAGGTTTTGTCTTTGCAGCCTATGAT
ACCACCTACAATGTAAACGTTTTGACATTTTCCCCCGACTGGGACTGGGA
TATGACTGGGGTATAGTATAGGATGCTCAGAAGGTCTAGATGCGTTCATA
TTTTTCTTCATAAACAACCTGCCGTCATAACCCCTCCCCCCGCACCCCTT
GAATGGTTGGTTGCCGCCATCGAAGAGCTGACACATGAAACCACGAACAT
CATCTTCATCGTTGGTTTCATCCTTTAAAGCCTCATTTCTAGAGAGACAT
CCGGCGAGCGCTGGCTCTCATCGGATCTCGGCGTTGATTCGATCGACTCT
CCTGACCACGGGTAGGGAAGGCACTGCCCTTTCGGAAAGATGCCCGTGTA
CTTACGGCCGTTCTTGTCGAGAGCAATTTGCCCCAAAAAAAATCAAAACG
TTTCCATCCCGAATTTTGGAAAATGGGGCACAATCGTTATTTTGACGTAC
TGAAGAATCTCGATGCTTTGAAAAGAAGCTTTCACGACGTGAGAATTTTC
TGAAAGAATATTCTGCACAGCAATCACGCGTGGGGGAAAAGGTCATTTTC
TCTCAACGCTGTAGCTCGTGTCTTTGCTCCCTCCGATAGCTTTGGTTCGA
GACCGTAGCTTGACTTGAGGTCGTCGCTCCTCGCCCCTCTACTAATACTA
TAATACAGTAATGAATACGGTATATGATAAGGAATATAGCAAGTTCCAGA
CCTAGGGATAACCTCTGGTACAGGCTCGAACAGCGTCGCTGATAAAAAGG
TGGAAAATGGGCTCTGCTTTGGACTCGACCCGGCAAAGTGCATAATGTCT
GCACAGGAAAGGAGACAAAGGCTTCGACCTCGGCAGTGACAGTTGTTTGG
CTAGGCACGTTGTGCATTTTTAAGCCACTGTAGCGCTTATCGCCGTTCGA
CTGATCCTACTGCCTGTCCTACGGTACTGTGACGAGGCCTCACCAGGTTG
TCCTCACCAGGTTGGAGTTGGATCTTTTTTTCTTTTCTTTTTTTCTTTAA
TCTCACTTATAGCCGATGGACCTCATAATTACCATCCTGCCTGTGGTCAC
AAAGGATCTTCCAATCTCTCCCCGGTTCACGCCTTACAATTTTTTATCGC
GATGCAAGTTCAGCAATCTTACAACTCGTCAACTAATAGTTGAATTTTAC
TTACTCACGTTCCCACGCTTATTCCGTTACGAAAGAAAAAACACAAATCC
TACTTTGGTAAGAATCGAACTCACGACTTCCGCACTAGCAGGTGTGCAGG
TTACCTACTAGACCACTCGGGCGACGAGCCAACGTGCCGAGAAATGCCAC
ATCTTTTCTACTCTTTCCAACTTTCCACGTCCCGAAGCGTGCAAATAGTT
ATTATAGCATCGAGTTGAGGTGGAAAAGTCCATTTTCAAATTCAGCAGGG
AGCTTCCGATGGAAAGTTAAAAAGAAAAATGCCGTTTTTTGTCTCTTTAT
TTATAAAGAAATACCCTTAGTTGCGTCAATGGACTGTGCTCTTCCGCCGG
AGCTTCGGCAATGAGGAACTCCAACGAGTAATCTCACGAGCCTTGCCGTG
GTGCCTGGACCCAAGACGTTGCGATTTCGTAGCGTGCTCGGGTGTGGCTG
TGGTGCTGGGGTGCTGTCTCCTGGGGCTTGATGTCCAAAAAGAGTCCGAA
CTTGACAAATTTTCAAGGTGAAAACGCCGTATCCATCATCGTTTTCCACA
TTTGAATCATGTTGATTCTTGACACGTTTCCCAACATATTTTTTGCGCCG
CCAGTACCGGCTCCTAATGACTATTAATAGACTCGACTCAAGCCACACCA
GCAGCCACCCCTCCCCCCGACCTTTGGTCTTTCCAGCCGGCCTCCACGCC
CGCTTTGACGGAAGAGACTTCACATTACTGTGCCGAAGCCTGAATGGGCA
GTTTGTCTCGTGTACTGAATCGAGTTAGAAGGCAGTGCCTGGGGCATTTT
TACCGGACGATGGACTGCCACCCTCTTGAGGAGGGCGGAGGACTGCCGTG
TTGCTCATCGTCGAGAATATACGCGAACTAGGTCTCCGTATATATATATA
ATATATATATATATATAAATATATATATTATAACCGTGCCCTTTAGAGCA
TTCGGGTCCGTGTTGCTCCGTACTGGATCGGCTGCCCTTTTAAGTAGGGT
GGCTGACGGAATAGTTCTATCGCCTTTCGCAGCAGCACAGAGCGCTCGAG
AGCACGCTGAACGATCCGTCAACCCGCTGTACAGAAGTGCCAGGTTGGTA
AGTTACAACTTATACTTCACACCGGGGAGCTGTACGCAGCAGGCGATTCG
ACTCAGACGGTGGTGTGTGAACTCTCGGAACGGTACTCTTGCCTTGACGT
TACTTGTGACGTCTAATGCGTGAAGTACAGTTTTTTTGCGACTTGTGTTG
GAGAGCGACCGGTTAACGCCACGTTTACTGGCGCGAACACCGCTCGTCAA
ATCTTCAGAGAAAACATCGAGGCAAGCGTGTTGGCGCTACCTCGGACCCC
AAAGATGTCGCCTCTTCTTTTGCTACATCTAACAAAACGTCAAATGTTTT
TAAGCAAAGCTACAGTACTCAAAGTTACACCAGAGTAGTGTACCAATAAC
TCTGTTCGCGGCCCGCCTTCTGTGCGCTCCAACTCCGCCATGCTACGCCC
CCCCCCACCAGCATAACCAAGACATACCGCGGTGCCCAGCGATGTGATTT
CTTGATACCATCTCCGCTTACTCCCCGAACCTCTACGTTGCTCCTTACCC
ACCCCACTTGCGCGAAGCCTCACGGTGCAATGGCTGCCCTCGGTGAAGAC
CCAGGAGAGCAAAGACTACGCCGTGCACAAGCTCATCCTCGGGACCCACA
CCTCCGGGTCAGAGCAGAACTACCTCATGGTGGCAAACGTCAACCTTCCC
GTGGCGGGCGTGGACATCGACAATCGCACCTACGACGACGAGAAGGGGGA
GATGGGGGGCTTCGGGGGTGTTCACGGAAAGGCGAGTTCTCGTTGTCGAA
ACCCCGCCCTTAGCGCAGCAGGGTCGTCTTAAGATACCAAATCCGAGCAA
GTGTCCCAAATGGAGGAACGGTGGGCGTACGGGTGTCACACGCTTGGGTC
TCTCTTGATGCCTTGAATATCTGCATCATTGTCGGACGACATAACACCAA
CCGTTTTTTTGGTGAGTGTGCACGAACGAGAGTCGGAGATGTGGTCAGTT
GGGCAAAATTACAAAATAGGGTATTTTGCTCTTAAATCATCCGCCGTGTC
TCAACTTCATGGGCGAAGAGTTTTAAACTTTATACCAGCGGTATTTCTTC
GAGCCATACGTACAGCTGTCGCTCGTTGCCGAAGGATGTTATTCAATTCT
CCGGTCTTGCAGCCGTGGTTTCTGAACGTGACTCCGGTCCCACCAGGCAG
TCACAGAGAGAGACAGACTACTGGACTTTTGTCACAACAGCGCCTGGTTC
ATGTCCAACGTACTTTTTTTTCTTGTTGCCTTCGCCAGGTCGAGGTGACG
GTCAAGATCAACCACGACGGGGAGGTCAACCGCGCGCGATACATGCCGCA
GAACGAGTTTGTCATCGCCACCAAGTCTCCCTCCGCCGACGTCTGCGTTT
TCGATATCTCCAAGCACCCCAGCGTGCCGCCAGCGAATAGCGAGTGAGAC
CTTTTTTATTGCAAGGCGCCAAATCTAAGGGCGCGAGAGTTTTGTCTTTT
ATAGGCAAAGGTGTGGGTTCGAGGCCCGTAAAGAACTATTATGTATTTTA
AAAACAGTTCTCTACGCCCTTTCAGGTCCAATGTGTCAGTTTTTTTTTAC
GTTTGCTTGGGGATCGGGGATCTTGTTTTGTGATTATATTTTGTGTTGGT
CTTGCTTTTTTTTTTTTTTTAAAGCTGTTTAGCTTTTTATGAGGTAGGAT
TAGCAGGAAGTTCCACATATTTATTTATCTTTGATGGCGTGGTTAGAATA
TGATTCTGTGTTTTATTTTGACTTTGACTATACAGGCTTTTTTGCTTCTT
CGATGGTTTAGTTGTCGTTGTGCTTGTTGTAGCTAACGCTTTTATTTGAA
CTCTGGTACATTTATATGCTCAGACCTCAGACCTATTTTGGCGGTGTGGG
GGGAAGGGGCGAGGAACATCTATAGGTTTTCTGAAGTCGACGATCTCTCT
CATTGGAAGACAGAGAAAAAATAAGTGTCTCGCGGAACAGCCACCCACCC
GTTTGCAGCGCAACTGTCCCTTGAAATCCCTCTTAAAGTATTCCTTGTAT
CCCACGGACTGCCGTGCATTCCGTGTGGACCCGTCTTCGCCCCCTCCCCC
GGTCTCGACATGTGGCTTCGATCGTTGTGCTCTCTCGCTTGGATGACCTC
GAAAAGGTGTCGACCAGGAGCACCGATGCAAGGGACACAGCAAGGAAGGC
TATGGCCTGAGCTGGAACCCGCATGTGGAGGGACGCTTGTTGTCGGGAAG
CGACGACGGCCTGGTGTGCTACTGGGACCTCAAAGGAGCGGGCCAGACCG
TGAACGCCACGCAAACATTCGGTGAGACTTGCGATCTCCAGAAGGTCTCG
AGTTCCCGGGGAGAGATGAGAGATGAGGGGGGGGTCAACGTGACGGGAAG
TCGTCGAATAAATCAACCGCAATGTCCGTTGTATGGGTCTTTGTGGCTCG
AATCTCGTGCGGACTGATCATATTTTTTATTTCCGTGGTGGAACGCGTGT
GAGCGTGAAATAGCGAAATTGAGCCAATGGTTGACTTATGTGTAGATGTA
GGAGTGCATAGTTTGCATGTTGATAAAAGAGGCGTAGGCGTGAACCGCAG
AGGGCTGGGTAGATAGATCCTCGATATCGCCTGCTGGAAGGACTGGGCAG
CGTCACTGTAGCACGTTGATAAGTCCCAACGGCAAAAACTGAGGTACCGA
CAAGAACAAGGCCTCCCAAAAAAACACAACAGCGCACAAACTCGTCCGGG
GAGGTGGTATACTATAGGTAGAGCTCTTTCAAGACGTTTGTGTGCACTGG
CCCCTCCACTGGGGCGGAATGGGACAGCCGAACATGTCTCGAGAGACCAA
ATTCTCAGGCAGGAGCGGGGAGAAGGATCATCAACTTTCCTATTCAGCTG
ATCACAAGGAGGAATGTCCACCATAGTCTACAATATTGGGGCCCAACGTG
CAAAAAGGGAATGGCCACATAGATGCACACACTCATACTTTGGGTGGCGT
AAATGGCGATAGCCGAACAATTGGTTTCTTGTTTTGAGTAGGGTAGGGCG
ACGTACAAATTGACTTATGGATGTAAAAAGGTAGACAAAACAGGTTTTTT
ACGCGGCGTGGTTATCGACGTTGTCGGGTATTTTGGGGAGGTTCGGCCGA
TCAGGAAACCAGATCTGGGGCTGGTTGACAGCGCGCTCAAGGAGTATCCG
GCGAGGTCGGACATCGACTACTGTTGTATAGTATACCTGGTACCAGATTA
TGTCGGTTCCCTTTTTTGTGTGACTCGCGTCTTTTAGCGTCTTTTATTCC
GACACCGCTCGGTACAGTAGCCCGTTTCTAACCCTAACCGAATCTATTGC
GTGATCCGTTTGGGACTTTTTTTCTGCGTGATGAGAGCTGGGTACTGCTA
TCAAGATCATGATGTGATGACCAAAGCTCCGTCTCTACAATCATATCCTG
TCAGTGCGCGCGCAAGTGTGTGGCGCTGTGCTCCGAGTGATCCAGATAAT
CTGTTACATTTTCTGCCTTGTTTTGCGCTTTTCGGTTGATCGCAGAGGGG
CACACCTCGGTCGTGGGCGACGTGGCGTGGCACCAGCACAACCCGAAGCT
CTTCGGCTCCGTCGGTGACGACAAGCAGCTCCTGTTTTGGGACACGACGA
TGGATGGGGCAAAGCCAACCACGGTCATCTCGGAGGTTAATAAGTGCTAA
CGGCTATGCTTTTCGTAGTATGTATGGTCACACATACAGTATAGCAAGAG
TATGGATCAACCTGGTAAGGTTGCCAATCCTGCTCGTGGTCAGCTGAACA
GGGAGGGAAAATAATATTCCCCTGTCCGCGTTCGTGCCCGGGAATTTGGT
CTCTCGGCAGTCCCGTCCCGCGTCAGCCTGCTCATCTCCATACTCAGGCT
GAATCTGGTGCTTACTTGCGGGATTCCTCCCGAGTTCCGCGGCGGCGTCC
ATATATTTATATTAAACCGCCATATGACATCGGGTCAGTTCCGAGTTTAT
CGGGCCACGCAACTGCGTACCGATGGCGTTCACTGCCGAGAGTCCGTCGG
CACAGGGCCAGTAAACCATAAGATAGTTCCGAACGCGTGCTGCCTTAGCA
GGTCACCATGGACCAATTAGTATACGCCTCTCTTTCCCACACCCACTATT
GGTATGAAGTGGACATGTTGAAAGTAACGCGCATTAGGCGCCTACAACTC
GCGCGTTGCCGCACCCGTCGGAGGAAAATGAATGGCGGGGACAGGATGCT
ACCACCTCTACCGCATAGGGAGATCGTTTTGGAAGACGCCGTACCGACAC
AGGATTTTTTTAGAACCTAAGGGTACCGGGAGGACAGTCGACTTGTTCGG
GAGCTTCGCGCAGTCAACTGCTTGTGTAACGAGTAGGGTAAAAGGTGCAA
GCGCAAAATTAGTCCAACAAGGTTTGTGGTACTTGTGGGAGGGGTTTCTG
GGGATCACCTCTCCCAGCGTTTTTTTGCACGCGGGCGCATCGAAGAGAGG
ATGCCCCTTGTATGGATGAAGGGTCCTTCATTTCATTGTACCTGGAGGTG
CTTGCCGAAAGTTCAAAACCAACCCCCGCATGCAATGGATCGTAATTTAC
ACTCTCCCTGAGCAGTCGGTTGGGTATCGCTGTAGATGAGGCCGCTGGTC
GAGTGACCGGGTGGCGTAGGCCTCCGCCAACAAGGCGCCAACGAACGTTG
ACTGATCAAAACTTGGCTACAACCTACTCCGTAGTACAAGTACTTCATAG
TTATTTCGTGCGTCGGATGATCCTCAATCGTTTGTTGTGACGGCTGTTGT
TGACCTCTCGTTCCACCCAGGCACATTCCGCAAACATCAACTGTTTGGCG
TTCAACCCGTTCAATGAGTTCCTGCTGGCGACGGGCTCGTCCGACACCTC
CGTGGCGCTGTGGGATATGCGCAACATGGGCAAGCCGATGCACAAGCTGG
AGAGGCACAGCAGCGAGGTGGGAGACGGGGGAGGTTGATCATTTTGTCGC
CAAACTTTGAAGTAGCGGCCTAGAAGAGGTTAGGAGGGAGGATAGAGAAT
AGATTGGTTTCAGCCTCTGTTCCCCTCCTTGCGGTGAGCTTGACGTATGT
TCGCCTCCTGCAGTATGAGCACACACTCTTGTTGTGTCCTGTTTTGGAGA
TTTCCTGGTTTTCGTCGCGTCCAGCGATGCCTGTTTCCCGTGCGGCCATC
TAGGATAAAAGCAATGGACTTCTCACGCTTCTCGCGAGGGGGCAGTACGC
TGCAGGATTGTGCTAGGCCTGTCCCGAAGCTGCCGTTGTTGATTTCCTAG
TTATCGCTCCACTATTGAACAGGCCTCCCTCGATTACACTCTTAAGTGCC
GCGTTTTTTACGTTTCCCCTCTGTACTCATTTTCCTCTCTCATTGACATG
TCTGCGTTACCCGTACGTGTCGCGACATTTTTTGGCACGGGCATATTTTC
CCGCCACCGCTGCTGCTGATTCTTGTGTGATGTTATTAAGGTGCTGGGGG
TCCAATGGGCGCTGTTCGACGAAACGATCCTTGGGTCTTGCAGCGCGGAC
CGACGGGTCAAGGTGTGGAGCCTCAGCCGCATCGGTGAGGAGCAGACCCC
TGAAGACGCTGAGGACGGGCCTCCGGAGCTGCTCTTCATTCACGGTGGAC
ACACCAGTCGGGTGGGAGATTTCAGGTGGGTAGTGACATCGTTCACACTG
CTGAAGTAACGCAGGCAGATAAAGGTTTATGGTGAATAGTGTGCACCACC
CCCCTCGGTACGCACCGTCAAAAGAGGTGTAGGCGAAAGCTATTCAACGA
ACAGGCAGTGTCCATGTGTTGGGCGCTCATTCGGTGGTAGATAAAAACGT
GCGTAGAGCAACCCGTCCTCATCGGGACTGCTCCTGCTGCTGCTCCACAT
TCTTCCGATCCTGCTTCCGCTCTGCGGGGTGTTCTTGTTTCGTTTGTTTT
CTCTGCTACCAGTTGGAACCCAAACGACGACTGGGTGTGCGCGTCGGTGT
CGGAGGATAACATCTTGCAGGTCTGGCAGATGGCGGAAAATATTTATGCC
GAGGAGGTCGAAAATGACGACCCGGACGAAATCGAGGATCAGGAACTCGA
GGACTAACTCTTGTCATATATAGTAGCCCTGAAGCGTCGTTTCACGAATT
TGTTTTTATTATTTTGTTTAGGGAGGGGGGGGGGTGAGGGGTTTCCCATC
CCCTCCTTTTCTGAAAATGCATCTGGTCGGGTATACCAGGTACGAAGTAA
ACGTTTTTCGTACGGTATTAGACACCGTCGTAGCGCGGGGATGGGGGATG
AGAGAAAGGGACTGAGCACATGTTTACAGTTCACCTGGTTGTAAATGACA
CTTGTTTGAAAGGAAGACGCGAACAGGCTCAGGAGAAAAAGCGATACCAA
CGTCCCGTGTACACACGAGTGATCGCACTGTTCAGTTTTCTGCGACAGAG
GTCGAAAATCGTAGAAAACAAGATGGTGAACTGGACGAGGCTTGAGTGGT
GCTAACAGATCCAACGCTGTACCGCCTCGATGTAGGTGAGCGTTCCGCTA
TAGAAGGCTCCCTCTAAGGCGCTCAATACAGCCGACAGCGGCGTTGGAGT
GTAAAGTACTGTCGAATAGATTTGTTATTCCCGCTTTTGTCTCTGATTGT
CTTCGCTCAACTACCGCCTCCTTACCTGTAGGAAACTGCCTTGACCTTTG
AAGGACCAGAAGCCTCTTTTCTGTAGCCCCAGGGGTTTGTTGCGCGTGGT
GAGAGAGTGCATCCGTTTCCATGACATATCTTCCGAACAATTCACGACAA
AATGTAGCAGCAGTACAAGTTATCTCTTCCGTTCGCGCGCGTCTTGCGGA
TGTCGTCTTCGCTTGACTACCGCCTCCTTACCCTGTAGAAAATGTTCTTG
GCTTTGAAGGACCAGAAGTCTCTTTCCTGTACACTCCGAGGTGTTAGTTG
CGTGCGTTGAGAGAGTGCATCTGTTTCCGTGACCTATCTTGACCAATCTA
TTCACGACAAAATGTAGTACCAATCTGAGTTCCCTCATCCGTTTGCGCGG
GTCTGGTGGATGGGCTGCTGTCTCGACGGGGCAAAGCTTGCACGAAAAGG
CTCGGATGATATTCATCTACTATTAATAATACATAATGTTAGGCTTCTGT
ACTGTTCCAAGTAATACACCAACTCGCGTCTTTGATGTCCATCGGCTGCC
ATGATTGTCCCACAAGCCAACGGCAAAAAGGATGTGATCGTGTATACCGC
GAAGGATGCTTGAGTTTCGATTCTTGACAGAATGGTTTATTATTTTATTT
TGGTTCCGCGGCGGGAAGCGTGAATACAGCAAGAAAAATTCAACCATGGG
TTGACGAAGTGTTAGGAGTGTGCTGAATTTGCTTCGCGAAAATAAATCGT
TGCCGAGAACCCGGGAGATATGGGGAGGTCCTTAAGTGGCTCCAGCCAGG
ATGGCAACGTTGCCGTTGTGGCCTGTCGGTCGTGAGTTTCAAACAGAAAC
AGAAAAACGGTGATCGGTTTTGGCAAACGAAGAAAAAATGCCCAGATTCG
AGAATTAGCTACTCGTGTATAGCGATCGGCGGGCCTGTTTTTTTGTCCCG
GATCTTGGGGTGGTCTTTTAAAACGCACCCGGTGAAGAATGTGTCTCCGC
TGAAATCCGAATACGGTAGCGACCGTGACGGGCGTTGGGTTGCTGATAAA
CATGATCTCCCTCACATGTTTTGTGTTGCTAAAAGCTTGAACAACAACGG
TTG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig994:100944..114446-

>mRNA_F-serratus_M_contig994.21231.1 ID=mRNA_F-serratus_M_contig994.21231.1|Name=mRNA_F-serratus_M_contig994.21231.1|organism=Fucus serratus male|type=CDS|length=1758bp|location=Sequence derived from alignment at F-serratus_M_contig994:100944..114446- (Fucus serratus male)
ATGGCATCATCAGAAGGAATTGAAAGCCAAACCGGGTCGGAATCGACGCC
CACGCCCGCCGCCACAGCTGCCGCTGCAGCTGTCGCCGCCTCTGCGGCAG
CAGACGTCGAGGCTACCGCTGCGGCAGACGCATTGGCAGCACAACAGGCT
AGAAGCAACAGCGCTCACGAGCAGGCGGAGGAAAGGATTATCACGGAGGA
GTATAAAGTATGGAAGAAGAATACACCGTTTTTGTACGATGTGGTCATGA
CGCACGCGTTGGAGTGGCCAAGATGGCATCATCAGAAGGAATTGAAAGCC
AAACCGGGTCGGAATCGACGCCCACGCCCGCCGCCACAGCTGCCGCTGCA
GCTGTCGCCGCCTCTGCGGCAGCAGACGTCGAGGCTACCGCTGCGGCAGA
CGCATTGGCAGCACAACAGGCTAGAAGCAACAGCGCTCACGAGCAGGCGG
AGGAAAGGATTATCACGGAGGAGTATAAAGTATGGAAGAAGAATACACCG
TTTTTGTACGATGTGGTCATGACGCACGCGTTGGAGTGGCCAAGCCTCAC
GGTGCAATGGCTGCCCTCGGTGAAGACCCAGGAGAGCAAAGACTACGCCG
TGCACAAGCTCATCCTCGGGACCCACACCTCCGGGTCAGAGCAGAACTAC
CTCATGGTGGCAAACGTCAACCTTCCCGTGGCGGGCGTGGACATCGACAA
TCGCACCTACGACGACGAGAAGGGGGAGATGGGGGGCTTCGGGGGTGTTC
ACGGAAAGCCTCACGGTGCAATGGCTGCCCTCGGTGAAGACCCAGGAGAG
CAAAGACTACGCCGTGCACAAGCTCATCCTCGGGACCCACACCTCCGGGT
CAGAGCAGAACTACCTCATGGTGGCAAACGTCAACCTTCCCGTGGCGGGC
GTGGACATCGACAATCGCACCTACGACGACGAGAAGGGGGAGATGGGGGG
CTTCGGGGGTGTTCACGGAAAGGTCGAGGTGACGGTCAAGATCAACCACG
ACGGGGAGGTCAACCGCGCGCGATACATGCCGCAGAACGAGTTTGTCATC
GCCACCAAGTCTCCCTCCGCCGACGTCTGCGTTTTCGATATCTCCAAGCA
CCCCAGCGTGCCGCCAGCGAATAGCGAGTCGAGGTGACGGTCAAGATCAA
CCACGACGGGGAGGTCAACCGCGCGCGATACATGCCGCAGAACGAGTTTG
TCATCGCCACCAAGTCTCCCTCCGCCGACGTCTGCGTTTTCGATATCTCC
AAGCACCCCAGCGTGCCGCCAGCGAATAGCGAGTGTCGACCAGGAGCACC
GATGCAAGGGACACAGCAAGGAAGGCTATGGCCTGAGCTGGAACCCGCAT
GTGGAGGGACGCTTGTTGTCGGGAAGCGACGACGGCCTGGTGTGCTACTG
GGACCTCAAAGGAGCGGGCCAGACCGTGAACGCCACGCAAACATTCGGTG
TCGACCAGGAGCACCGATGCAAGGGACACAGCAAGGAAGGCTATGGCCTG
AGCTGGAACCCGCATGTGGAGGGACGCTTGTTGTCGGGAAGCGACGACGG
CCTGGTGTGCTACTGGGACCTCAAAGGAGCGGGCCAGACCGTGAACGCCA
CGCAAACATTCGAGGGGCACACCTCGGTCGTGGGCGACGTGGCGTGGCAC
CAGCACAACCCGAAGCTCTTCGGCTCCGTCGGTGAAGGGGCACACCTCGG
TCGTGGGCGACGTGGCGTGGCACCAGCACAACCCGAAGCTCTTCGGCTCC
GTCGGTGA
back to top