prot_F-serratus_M_contig994.21228.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig994.21228.1
Unique Nameprot_F-serratus_M_contig994.21228.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length290
Homology
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A1Q9CG92_SYMMI (28 kDa inner dynein arm light chain, axonemal n=6 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9CG92_SYMMI)

HSP 1 Score: 204 bits (520), Expect = 1.830e-60
Identity = 126/283 (44.52%), Postives = 164/283 (57.95%), Query Frame = 0
Query:   10 EVTGVENL----------MQFPEQIP-PTLVKYDPPIFAGLEPFHGPDSHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXAKQKRQEEVDFLKYHGQHLESFLK 281
            E++GV N+          M  P   P  +LVKYDPP+  G  P        +      +   +  + T               ++P A+ +  T   DD+++++LPPREW E+   + QYVS  PATRL VI LQE LD++L ERQA ETGICPVRE+LY+Q FDELIRQVT++ PERGLL LRVRDEIRM+I AY+TL+ SSVTFG +KQLQ+EQG  E E+ I+  EE K                            ++KR+EE+DFLK+  QHLESFLK
Sbjct:   79 ELSGVRNICTCLDIAAATMSIPVGRPRESLVKYDPPLELGPAPSDAVGRKGNKPPKPNSLKAQLARKT---------------QLPPAESKPNT---DDVLHALLPPREWIEDGKHYQQYVSNQPATRLDVIQLQEALDQRLMERQARETGICPVREELYSQCFDELIRQVTINCPERGLLLLRVRDEIRMSIAAYQTLYQSSVTFGTRKQLQSEQGKAETEQMIAEHEEQKKQREARVVELKNKCEAIERREAERRAVDERKRKEEIDFLKHQQQHLESFLK 343          
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: F0W747_9STRA (Dynein light chain intermediate polypeptide putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W747_9STRA)

HSP 1 Score: 200 bits (508), Expect = 5.920e-60
Identity = 99/200 (49.50%), Postives = 135/200 (67.50%), Query Frame = 0
Query:   88 GQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXAKQKRQEEVDFLKYHGQHLESFLKQLGRRG 287
            G    ++++D++ +MLPP+ W EE+G W++YVS  P+TRL VI LQE++D  L +RQA + GICPVRED+Y Q FDELIRQVT++ PE+GLL LR+RDE+R+TIDAYK LF+SS+ FGI+KQLQAE+G  +++E ++ L + K                             +K +EEVDFLKY  QHLE+FLK  G  G
Sbjct:   41 GDNSFNRIEDVLQAMLPPQMWHEESGYWLRYVSPCPSTRLDVIKLQEEIDTTLSKRQAKDCGICPVREDIYAQCFDELIRQVTINSPEQGLLLLRIRDELRLTIDAYKMLFESSILFGIRKQLQAEEGTGDIQEKLNDLAKEKHDSECKLMSLSNKLELIEKRAGERKAMQDKKNKEEVDFLKYQNQHLEAFLKAAGSGG 240          
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A8K1C6X6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6X6_PYTOL)

HSP 1 Score: 200 bits (508), Expect = 6.290e-60
Identity = 105/202 (51.98%), Postives = 138/202 (68.32%), Query Frame = 0
Query:   86 ADGQGKTS--QLDDMVNSMLPPREWTEE-TGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXAKQKRQEEVDFLKYHGQHLESFLKQLG 284
            A+G  K S  +++D++ +MLPP+ W EE TG W++YVS  P+TR  VI LQE++D KL +RQA E GICPVRED+Y Q FDELIR+V ++ PERGLL LRVRDEIR+T DAYKTL++SS+TFGI+KQLQAE+GM ++ E I+ L+  K                             +K +EE+DFLKY GQHL++FLK  G
Sbjct:   37 ANGAEKESIQRIEDILKAMLPPQMWHEEDTGYWMRYVSATPSTRFDVIKLQEEMDAKLMKRQARENGICPVREDIYHQCFDELIREVAINSPERGLLLLRVRDEIRLTTDAYKTLYESSITFGIRKQLQAEEGMDQLHERIAALQHEKQEHESKVLELTNRLELIEKRATERRALQDKKFKEELDFLKYQGQHLDAFLKSAG 238          
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A7S1N962_9EUGL (Hypothetical protein n=2 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1N962_9EUGL)

HSP 1 Score: 199 bits (505), Expect = 1.440e-59
Identity = 114/205 (55.61%), Postives = 142/205 (69.27%), Query Frame = 0
Query:   79 RGHKIPRADGQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXAKQKRQEEVDFLKYHGQHLESFLKQL 283
            +G K+P  + +   +Q +D++NS+LPPREW EE   WIQYVS  PATRL VI LQE+LD +LQ+RQA ETGICPVRE+LY Q FDELIRQVT++  ERGLL LR+RDEIRMTI AYKTL++SSV FG++K LQAEQG  +M   I  LE  K  XX XXXXXX                 ++K QEEV+FL+   Q L + L+ +
Sbjct:   31 KGAKLPPVESKPSVTQTEDILNSILPPREWEEEGQPWIQYVSSTPATRLDVINLQEQLDMRLQQRQARETGICPVREELYAQCFDELIRQVTVNCAERGLLLLRIRDEIRMTIAAYKTLYESSVAFGMRKALQAEQGKADMLSQIRQLERDKEEXXXXXXXXXAKCEAIEKREIERRQVDEKKHQEEVNFLRKANQQLTTQLQTI 235          
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A8J5IQC3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IQC3_9STRA)

HSP 1 Score: 206 bits (524), Expect = 1.630e-59
Identity = 122/269 (45.35%), Postives = 163/269 (60.59%), Query Frame = 0
Query:   21 PEQIPPTLVK----YDPPIFAGLEPFHGPDSHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVNSMLPPREWTEE-TGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXAKQKRQEEVDFLKYHGQHLESFLKQLG 284
            PEQ+   L +    Y  PIF G E    P     SK +  AT       T + G T  G+           G    ++++D++N++LPP+ W+EE +G W++Y S  P+TR  V+ LQE LD KL +RQA E+GICPVREDLY+QAFDELIR+VTL+ PERGLL LRVRDE+R+T DAYKTL+DSS+TFG++KQLQAE GM ++ E I+ L+  K                            ++K +EE+DFLKY GQHL++FLK  G
Sbjct:  227 PEQLSKELTERKRQYGEPIFTG-ETLDPPRKAPSSKSITAAT--VVAAATESAGATANGK-----------GSDGVARVEDILNAILPPQMWSEENSGFWLRYASSVPSTRFDVLKLQEALDAKLLQRQARESGICPVREDLYSQAFDELIREVTLNCPERGLLLLRVRDELRLTTDAYKTLYDSSLTFGVRKQLQAEDGMGDLAEQIASLQRDKEESESNVAELTNKLEVIEKRAAERKALQEKKFKEELDFLKYQGQHLDAFLKSAG 481          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Q9CG92_SYMMI1.830e-6044.5228 kDa inner dynein arm light chain, axonemal n=6 ... [more]
F0W747_9STRA5.920e-6049.50Dynein light chain intermediate polypeptide putati... [more]
A0A8K1C6X6_PYTOL6.290e-6051.98Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S1N962_9EUGL1.440e-5955.61Hypothetical protein n=2 Tax=Eutreptiella gymnasti... [more]
A0A8J5IQC3_9STRA1.630e-5945.35Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 216..267
IPR019347Axonemal dynein light chainPFAMPF10211Ax_dynein_lightcoord: 97..282
e-value: 8.9E-76
score: 254.0
IPR019347Axonemal dynein light chainPANTHERPTHR13183AXONEMAL INNER ARM DYNEIN LIGHT CHAIN 28coord: 19..283

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig994contigF-serratus_M_contig994:68117..72128 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig994.21228.1mRNA_F-serratus_M_contig994.21228.1Fucus serratus malemRNAF-serratus_M_contig994 67956..72155 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig994.21228.1 ID=prot_F-serratus_M_contig994.21228.1|Name=mRNA_F-serratus_M_contig994.21228.1|organism=Fucus serratus male|type=polypeptide|length=290bp
MDLDTRKVPEVTGVENLMQFPEQIPPTLVKYDPPIFAGLEPFHGPDSHSD
SKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVN
SMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGI
CPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDS
SVTFGIKKQLQAEQGMTEMEESISHLEEGKKELELQVSELRNKMEVMERE
EAERREMAKQKRQEEVDFLKYHGQHLESFLKQLGRRGGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019347Axonemal_dynein_light_chain