mRNA_F-serratus_M_contig994.21228.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig994.21228.1
Unique NamemRNA_F-serratus_M_contig994.21228.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: D8LEJ6_ECTSI (p28, 28 kDa light chain of axonemal inner dynein arms n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEJ6_ECTSI)

HSP 1 Score: 320 bits (821), Expect = 5.440e-106
Identity = 177/284 (62.32%), Postives = 200/284 (70.42%), Query Frame = 1
Query:   28 MDLDTRKVPEVTGVENLMQFPEQIPPTLVKYDPPIFAGLEPFHGPDSHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQLG 879
            MD++  + P++T  +  MQFP ++P TLVK+DPPIFAGLEP   P++  D+  L     G            MGG+            QGK SQLDDMVNSMLPPREWTEETGTW+QYVSK+PATRLAVI LQE+LD KL ERQALETGICPVREDLYTQAFDELIR VTLDGPERGLLCLRVRDEIRMTIDAYKTL+DSSVTFG+KKQLQAEQGM EMEE I+ L E K    L                        +KR+EEVDFLKY GQHL+SFLKQ+G
Sbjct:    1 MDVNVGRGPDMT--QQGMQFPMEVPQTLVKFDPPIFAGLEPSSDPNNGGDNALLMGGNGGXXXXXXXX----MGGK----------GQQGKASQLDDMVNSMLPPREWTEETGTWMQYVSKEPATRLAVIALQEQLDNKLLERQALETGICPVREDLYTQAFDELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMAEMEEQIAALGEDKKGLELHVSELRNKVEVIEKGESERRAVDDKKRKEEVDFLKYQGQHLDSFLKQIG 268          
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A835YSJ6_9STRA (p28 protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSJ6_9STRA)

HSP 1 Score: 271 bits (694), Expect = 2.920e-87
Identity = 151/271 (55.72%), Postives = 177/271 (65.31%), Query Frame = 1
Query:   67 VENLMQFPEQIPPTLVKYDPPIFAGLEPFHGPDSHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQLG 879
            +E L Q P  +P +LV+YD PIF G+EP  G   H    G A+++                                  +QL+DM+NSMLPPREWTEETGTW+Q VSK+PATRL V+TLQE LDKKL ERQA +TGICPVR+DLY+QAFDELIRQVTLDGPERGLL LRVRDEIRMTIDAY+TL+DSSV FGIKKQLQAEQGM EME  I+ LEE K                             ++R+EEV+FLKY GQHL+SFLKQ+G
Sbjct:    1 MEALAQHPNAVPDSLVRYDQPIFGGVEPATG---HG-GNGTASSS---------------------------------IAQLEDMMNSMLPPREWTEETGTWMQCVSKNPATRLDVVTLQECLDKKLGERQARDTGICPVRDDLYSQAFDELIRQVTLDGPERGLLLLRVRDEIRMTIDAYRTLYDSSVVFGIKKQLQAEQGMDEMEAEIAQLEESKQALEYRAQELRNRVELMEKREAEQRSVEDKRRREEVEFLKYQGQHLDSFLKQIG 234          
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A7S2CCB2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CCB2_9STRA)

HSP 1 Score: 259 bits (661), Expect = 2.940e-82
Identity = 147/265 (55.47%), Postives = 166/265 (62.64%), Query Frame = 1
Query:  100 PPTLVKYDPPIFAGLEPFHGPDSHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQLGRRGGK 894
            P  LVKYDP +F G +P    D  +  K  AT                                    SQLDDMVNSMLPPREWT+E+GTW+QYVSKD ATRL VI LQE LDK+L ERQA ETGICPVREDLY+Q FDELIRQVTLDGPERGLL LRVRDEI+MTIDAYK L++SSVTFG++KQLQAEQGM E+E  I  LE  K                             +KR+EE+DFLKY GQHL+SFL+QLG  GGK
Sbjct:   12 PDALVKYDPALFVGFDPATN-DVKATRKADATP-----------------------------------SQLDDMVNSMLPPREWTQESGTWMQYVSKDSATRLDVINLQEMLDKRLLERQARETGICPVREDLYSQCFDELIRQVTLDGPERGLLTLRVRDEIKMTIDAYKILYESSVTFGVRKQLQAEQGMAELESEIEGLEAAKKELENQVLELRNKVEVSEKRGNERKTLEDKKRKEEIDFLKYQGQHLDSFLRQLG--GGK 238          
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A7S2UXS2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXS2_9STRA)

HSP 1 Score: 253 bits (646), Expect = 8.600e-80
Identity = 141/270 (52.22%), Postives = 173/270 (64.07%), Query Frame = 1
Query:   70 ENLMQFPEQIPPTLVKYDPPIFAGLEPFHGPDSHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQLG 879
            E   Q P   P +LVK+D P+F GL+P     SH+ +  +A                             +ADG    SQ+DDM+NSM+PPREWT+ +GTW+QY+SK+ ATRL VITLQE+LDK+L ERQA ET ICPVREDLY+Q FDELIR VTLD PERGLL LRVRDEIRMTIDAYKTL+DSSVTFGIKKQLQAE GM++ME+ I+ LE  K                            ++KR+EE+DFLKY GQHL++ +K +G
Sbjct:   12 EGEQQDPANPPESLVKFDEPLFVGLQPS----SHTKAAAIANI---------------------------KADGA-NASQIDDMMNSMIPPREWTDVSGTWMQYISKESATRLDVITLQEQLDKRLVERQARETDICPVREDLYSQCFDELIRHVTLDSPERGLLLLRVRDEIRMTIDAYKTLYDSSVTFGIKKQLQAEMGMSDMEKQIAILELTKKERENKTLELRNKLEVIEKREVERRGLEEKKRKEEIDFLKYQGQHLDTSIKHVG 249          
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A6V1KR45_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KR45_HETAK)

HSP 1 Score: 251 bits (642), Expect = 3.130e-79
Identity = 141/271 (52.03%), Postives = 166/271 (61.25%), Query Frame = 1
Query:   70 ENLMQFPEQIPPTLVKYDPPIFAGLEPFHGPDSHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRAD-GQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQLG 879
            +N  Q P   P +L+K+D PIF GL+P +                                    G K+P A  G+   +QLDDM+NSMLPPREWTEE+GTW+QY+SK+PATRL VITLQE LDK L ERQA ETGICPVREDLY+QAFDELIR VTLD PERGLL LR RDE+RMT+DAYKTL+ SSVTFG+KKQLQAE GM+EM   I  L E +                             Q R+ E+DFLKY GQHL+ FLK +G
Sbjct:    9 DNGGQGPANPPESLLKFDEPIFVGLQPSN---------------------------------QNEGFKMPEAPKGELTNAQLDDMLNSMLPPREWTEESGTWMQYISKEPATRLDVITLQEHLDKCLVERQARETGICPVREDLYSQAFDELIRHVTLDSPERGLLLLRARDEVRMTVDAYKTLYGSSVTFGVKKQLQAELGMSEMANQIEALGEARRARERRCAELRARLDAAEKRAAERQQLEGQARRAEIDFLKYQGQHLDGFLKHVG 246          
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: F0Y5N0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5N0_AURAN)

HSP 1 Score: 238 bits (606), Expect = 1.300e-74
Identity = 120/192 (62.50%), Postives = 143/192 (74.48%), Query Frame = 1
Query:  319 MVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQLGRRGGK 894
            MVNSMLPPREWT+ +GTW+QYVSK  ATR+ VI+LQE LDK+L +RQA + GICPVREDLY+Q +DELIRQ+TLDGPERGLL LRVRDEIRMTIDAYK L+DSSVTFGI+KQLQAEQGM+E+E  I+ LE                                +KR++E+DFLKY GQHL++FL+QLG  GGK
Sbjct:    1 MVNSMLPPREWTQTSGTWMQYVSKKTATRMDVISLQEDLDKRLLDRQARDAGICPVREDLYSQCYDELIRQITLDGPERGLLLLRVRDEIRMTIDAYKVLYDSSVTFGIRKQLQAEQGMSELEGRIAELEAENKDLENQVLELRNGVEVIEKRENEHKAVEDKKRKDEIDFLKYQGQHLDAFLRQLGPVGGK 192          
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A8J2S909_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S909_9STRA)

HSP 1 Score: 235 bits (599), Expect = 5.880e-73
Identity = 132/260 (50.77%), Postives = 159/260 (61.15%), Query Frame = 1
Query:  100 PPTLVKYDPPIFAGLEPFHGPDSHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQLG 879
            P +L+K+D P+F G   F G DS +             +  T AGG                       QL +MVNSMLPPREWTE TGTW+QYVSK PA+R  VI +QE LD KL ERQA + GICPVREDLY Q FDELIRQ+TLDGPERGLL LRVRDE+RMT+DAYK L+DSSVTFG++KQLQAEQGM E++  ++ LE                                +KR++E+DFLKY GQHL+ FL+QLG
Sbjct:   10 PASLLKHDEPLFVG---FDGADSAA-------------KPGTAAGG-----------------------QLGEMVNSMLPPREWTEPTGTWMQYVSKAPASRTDVIAMQEALDAKLLERQARDAGICPVREDLYAQCFDELIRQLTLDGPERGLLLLRVRDEVRMTVDAYKVLYDSSVTFGVRKQLQAEQGMAELQGRVAELEAENKDLENRVLELRNGVEVVEKRASEHKAMADKKRKDEIDFLKYQGQHLDQFLRQLG 230          
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A7S1GAQ8_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GAQ8_9STRA)

HSP 1 Score: 224 bits (571), Expect = 1.300e-68
Identity = 115/194 (59.28%), Postives = 138/194 (71.13%), Query Frame = 1
Query:  310 LDDMVNSMLPPREWTEE-TGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQLGRRG 888
            +++++NS+LPPR W +E    W+QYVSK PA+RL VI LQE LD+KL ERQA E GICPVREDLY+Q FDELIRQVT++ PERGLL LRVRDEIRMTIDAYKTL++SSVTFG++KQLQAEQG+ EME  I  L E K                            ++KR+EE+DFLKY GQHL+ FLK LG  G
Sbjct:   49 IEEVLNSILPPRMWADEGAADWMQYVSKTPASRLDVINLQEALDEKLMERQAREMGICPVREDLYSQCFDELIRQVTINSPERGLLLLRVRDEIRMTIDAYKTLYESSVTFGVRKQLQAEQGLAEMESKIEELSEAKKDLQNQVLELRNKVEVIEKRATERRQLEEKKRKEEIDFLKYQGQHLDQFLKTLGGPG 242          
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A812WGS2_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WGS2_SYMMI)

HSP 1 Score: 222 bits (566), Expect = 1.320e-68
Identity = 110/186 (59.14%), Postives = 136/186 (73.12%), Query Frame = 1
Query:  319 MVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQL 876
            M+ ++LPPREW EE+G W+Q + KDPATRL VI+LQEKLDKKL ER+A ETGICPVRE+LY+Q FDELIRQV LD PERGLL +R RDE++MTIDAYKTL+ SSVTFGIKKQL+AEQG+  +EE  + L++      L                       ++KR+EE+DFLKY GQHL+SF KQ+
Sbjct:    1 MIAAVLPPREWIEESGVWMQNICKDPATRLDVISLQEKLDKKLSERKARETGICPVREELYSQCFDELIRQVALDSPERGLLLMRTRDEVKMTIDAYKTLYSSSVTFGIKKQLRAEQGIPALEEQANELQKTNSQLELEVQELRSKLEIIEKREAERRTTEEKKRKEELDFLKYQGQHLDSFTKQM 186          
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Match: A0A0G4FKQ2_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FKQ2_9ALVE)

HSP 1 Score: 214 bits (544), Expect = 1.910e-64
Identity = 127/258 (49.22%), Postives = 155/258 (60.08%), Query Frame = 1
Query:  106 TLVKYDPPIFAGLEPFHGPD-SHSDSKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVNSMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGICPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDSSVTFGIKKQLQAEQGMTEMEESISHLEEGKXXXXLXXXXXXXXXXXXXXXXXXXXXXXKQKRQEEVDFLKYHGQHLESFLKQL 876
            +LV+YDPP+  G  P      + SD K L T+    + Q++               K  +    G     +D+++++LPPREW E    +IQYVS   ATRL VI LQE LD++L ERQA E GICPVRE+LY+QAFDELIRQVT+D PERGLL L+VRDEIRMTI AY+TL+ SSVTFG +KQLQAEQG  E E  I  LE  K                            K+KRQEE+DFLK+ GQHLE FLKQL
Sbjct:   10 SLVRYDPPLELGPAPAPSEGMTTSDPKKLQTSV---KAQLS---------------KKVQTPHVGSRPSTEDILHAVLPPREWAEGGRHYIQYVSSQAATRLDVIQLQEALDQRLMERQAREAGICPVREELYSQAFDELIRQVTIDCPERGLLLLKVRDEIRMTIGAYQTLYQSSVTFGTRKQLQAEQGKAETEAHIQELETTKKDLEARVVELRNKCEAIERREAERATFEKKKRQEEIDFLKHQGQHLEHFLKQL 249          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig994.21228.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEJ6_ECTSI5.440e-10662.32p28, 28 kDa light chain of axonemal inner dynein a... [more]
A0A835YSJ6_9STRA2.920e-8755.72p28 protein n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A7S2CCB2_9STRA2.940e-8255.47Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2UXS2_9STRA8.600e-8052.22Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V1KR45_HETAK3.130e-7952.03Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
F0Y5N0_AURAN1.300e-7462.50Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A8J2S909_9STRA5.880e-7350.77Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S1GAQ8_9STRA1.300e-6859.28Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A812WGS2_SYMMI1.320e-6859.14Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
A0A0G4FKQ2_9ALVE1.910e-6449.22Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig994contigF-serratus_M_contig994:67956..72155 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score324.7
Seed ortholog evalue4.4e-86
Seed eggNOG ortholog2880.D8LEJ6
KEGG koko:K10410
KEGG Pathwayko05016,map05016
Hectar predicted targeting categoryother localisation
EggNOG free text desc.dynein heavy chain binding
EggNOG OGsKOG4001@1,KOG4001@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04812
Exons6
Model size1058
Cds size870
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig994.21228.1prot_F-serratus_M_contig994.21228.1Fucus serratus malepolypeptideF-serratus_M_contig994 68117..72128 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932791.3132188-UTR-F-serratus_M_contig994:67955..681161622932791.3132188-UTR-F-serratus_M_contig994:67955..68116Fucus serratus maleUTRF-serratus_M_contig994 67956..68116 -
1690964477.5238287-UTR-F-serratus_M_contig994:67955..681161690964477.5238287-UTR-F-serratus_M_contig994:67955..68116Fucus serratus maleUTRF-serratus_M_contig994 67956..68116 -
1622932791.469198-UTR-F-serratus_M_contig994:72128..721551622932791.469198-UTR-F-serratus_M_contig994:72128..72155Fucus serratus maleUTRF-serratus_M_contig994 72129..72155 -
1690964477.608668-UTR-F-serratus_M_contig994:72128..721551690964477.608668-UTR-F-serratus_M_contig994:72128..72155Fucus serratus maleUTRF-serratus_M_contig994 72129..72155 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932791.3342876-CDS-F-serratus_M_contig994:68116..681321622932791.3342876-CDS-F-serratus_M_contig994:68116..68132Fucus serratus maleCDSF-serratus_M_contig994 68117..68132 -
1690964477.5366302-CDS-F-serratus_M_contig994:68116..681321690964477.5366302-CDS-F-serratus_M_contig994:68116..68132Fucus serratus maleCDSF-serratus_M_contig994 68117..68132 -
1622932791.3530157-CDS-F-serratus_M_contig994:68184..683091622932791.3530157-CDS-F-serratus_M_contig994:68184..68309Fucus serratus maleCDSF-serratus_M_contig994 68185..68309 -
1690964477.5472803-CDS-F-serratus_M_contig994:68184..683091690964477.5472803-CDS-F-serratus_M_contig994:68184..68309Fucus serratus maleCDSF-serratus_M_contig994 68185..68309 -
1622932791.372249-CDS-F-serratus_M_contig994:69454..695171622932791.372249-CDS-F-serratus_M_contig994:69454..69517Fucus serratus maleCDSF-serratus_M_contig994 69455..69517 -
1690964477.558436-CDS-F-serratus_M_contig994:69454..695171690964477.558436-CDS-F-serratus_M_contig994:69454..69517Fucus serratus maleCDSF-serratus_M_contig994 69455..69517 -
1622932791.3951309-CDS-F-serratus_M_contig994:70160..703391622932791.3951309-CDS-F-serratus_M_contig994:70160..70339Fucus serratus maleCDSF-serratus_M_contig994 70161..70339 -
1690964477.5694346-CDS-F-serratus_M_contig994:70160..703391690964477.5694346-CDS-F-serratus_M_contig994:70160..70339Fucus serratus maleCDSF-serratus_M_contig994 70161..70339 -
1622932791.4232793-CDS-F-serratus_M_contig994:70672..707601622932791.4232793-CDS-F-serratus_M_contig994:70672..70760Fucus serratus maleCDSF-serratus_M_contig994 70673..70760 -
1690964477.5801141-CDS-F-serratus_M_contig994:70672..707601690964477.5801141-CDS-F-serratus_M_contig994:70672..70760Fucus serratus maleCDSF-serratus_M_contig994 70673..70760 -
1622932791.4489133-CDS-F-serratus_M_contig994:71729..721281622932791.4489133-CDS-F-serratus_M_contig994:71729..72128Fucus serratus maleCDSF-serratus_M_contig994 71730..72128 -
1690964477.5904307-CDS-F-serratus_M_contig994:71729..721281690964477.5904307-CDS-F-serratus_M_contig994:71729..72128Fucus serratus maleCDSF-serratus_M_contig994 71730..72128 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig994.21228.1

>prot_F-serratus_M_contig994.21228.1 ID=prot_F-serratus_M_contig994.21228.1|Name=mRNA_F-serratus_M_contig994.21228.1|organism=Fucus serratus male|type=polypeptide|length=290bp
MDLDTRKVPEVTGVENLMQFPEQIPPTLVKYDPPIFAGLEPFHGPDSHSD
SKGLATATDGEREQITGAGGGTMGGRDGRGHKIPRADGQGKTSQLDDMVN
SMLPPREWTEETGTWIQYVSKDPATRLAVITLQEKLDKKLQERQALETGI
CPVREDLYTQAFDELIRQVTLDGPERGLLCLRVRDEIRMTIDAYKTLFDS
SVTFGIKKQLQAEQGMTEMEESISHLEEGKKELELQVSELRNKMEVMERE
EAERREMAKQKRQEEVDFLKYHGQHLESFLKQLGRRGGK*
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mRNA from alignment at F-serratus_M_contig994:67956..72155-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig994.21228.1 ID=mRNA_F-serratus_M_contig994.21228.1|Name=mRNA_F-serratus_M_contig994.21228.1|organism=Fucus serratus male|type=mRNA|length=4200bp|location=Sequence derived from alignment at F-serratus_M_contig994:67956..72155- (Fucus serratus male)
TTGATTCGCCGAGACAGAGTCGAACAAATGGATCTCGATACGCGTAAGGT ACCTGAGGTCACCGGGGTAGAGAATCTGATGCAATTCCCCGAGCAGATCC CTCCTACGTTGGTCAAGTACGATCCTCCGATCTTTGCCGGTCTCGAGCCT TTCCATGGACCTGATAGTCACAGTGATAGTAAGGGTCTCGCCACCGCCAC AGATGGAGAAAGAGAACAGATAACAGGAGCAGGTGGTGGTACTATGGGTG GACGAGACGGCCGAGGACACAAGATACCCCGCGCAGACGGGCAGGGGAAA ACATCCCAGTTGGATGATATGGTGAACTCGATGCTGCCACCTCGAGAATG GACTGAAGAGACGGGGACTTGGATTCAGTACGTGAGCAAGGACCCAGCTA CCCGGCTGGCGGTCATAACGCTACAGGTGCAAGGGGATGGACGAATCAAA ATAGGAGATGGACGTAAAGGAATGCCGATTGGGCCATTGAGGCAAAAAAG GCACCACGAGACAATCGTGCCAGACGAGGGATCTCATAACACCCTTGTAC CCTCAGGTCGTAAATAAGCCGAAAGAATCCCTACCAAGTTGGGGCCCTTG AGATCTAATGCGTGCTATATTTTGAGTTCTTGCTTTTAAACGGCAGATCC AGCGTGAGTATCGTAGCACATGCACTGAATGTGCATCGTTCATACTACTG CGCAAATAAGGTTTAATGGGTACTATTGGAGGTTCGATCAAACCGTCTAG AGCTACCCTTTGGCACGCATCATGTACGGGAGTATGGCCTTGAGTTGGGC AGAAAAAAATGAGCCTCCACCGTCCACGTCTTCTCGAGTCTTTTCGCATC AACTTTCCTGTTCGGCTCAGTTGCTTTGCGGGCAACTGTCAGTTGTTCAG CGCCCGAACATAAGAGCGCGAAATGCTCTCAATCAAATCGATGCCGATGA CACAGGGTGTGAACGCGTTCGTCCATGTTTTCCCTTAAGCATCTCGAAAG ACTGAAACAAAGGCTTGAAGCCCTCGGTGATGTAAGGACTCGAAGTGTGC GGAGGCTACCATCCATTACGACCTGCAAACACCGATCACCTCTGTGCGTC GTAGTATATTTACTATATACTCGTAAAAAGCGACACACTTTGCGAGGAGG AAATATAGACTACTGGGCGGGTCAAGAGTTGTTCAAATTGCGATTGAGGT CCACAACGTCTAAAACAGATACTACACACACTACTACATAAGACAATATG AGCCTACACCTCAAATAATGTACAAACCACCTTAGCTTAGTCCGTCCCAA CAGTCGGACACCGCTAGGAGACGAAAAAAAAAAAAAAAGCTTTCCGGACT TGCTTCTTGATGCTCACGTTGCGCGTAATGGCTCCGTGCCGGAAGGAGAA ACTTGATAAGAAGCTTCAAGAGCGGCAGGCCTTGGAAACGGGGATTTGTC CCGTTCGCGAAGATCTTTATACCCAGGCCTTCGGTGAGAGCGTGGTTCAG ATGCGACAAAAACTGTCGCACAACACAGTCGAAGCCAAAAAGGGACGATT ATTGCGGTGTAGAATTGCGTAAAGCCCAACCTTGTACTCCCTGTCCACCA CAAAAACAACAACGGGGGTAGCTTAGGGGCGGAAGGCGAAGATCGAACTT ATGCTTCTGCTTGCTCTACTCTTTCGCGCATGTAAGATCATTGTTGTTAA TGAAAAATAATTAATATGTCTTGAGGCTGAAATACGTGCCTGACTGATGC AGCAGTCAGACGCGCATTTCAGCATCAAGACGTGCACGTCAGCAGCAATC GTGTGCATGCTTGCAGACGAGCTCATCCGGCAAGTGACTCTCGACGGCCC GGAGCGCGGGCTACTGTGTCTGCGCGTGCGCGACGAGATAAGGATGACAA TTGACGCTTACAAGACTCTGTTCGATAGCAGCGTGACCTTCGGCATCAAG AAACAGCTACAGGCGGAACAAGGAATGACCGAAATGGAAGAATCGGTGAG GGAGAAAAAAGTATGTCCCTGCCTTCTTGCGGCCTCCCTGGCGATCGACG TTCCGTGACATTATCTACCGTACAGGCCACAAAGTAATACCGTAGTAAGC GGGGGGAAACCGTAGAGTGGCTAGATCCATGTTGTGGGATACCTCGTGTC GTGTTCCCTTGGCACCTTCTCTGTGGATTTTGTGGGATCGCATGATCAGA TTAGCCGAAGGGCGCGAATCTGCTTGCCTCCATTCGGATTTGTAGCCCCC TTTTGGTACCACCGTGCCTTTGGTACATATATTATGCTTATAATATATCG TAATAATGCAGTAGTTTTGTCGACCTCGCGGTCCCAGGGTCCTTGGGGTT TACCCCCGGGACAATAAACTGTTACCGGTGGGACTTGACGTTATGCGGCC CCCTAACTATATAAGTCTCTATGTAGTTTTGCTGTGCGTCAACAGTCACT ACGTACCCGCTTGTGGACCCGACGCAAACGAGGTAACCCGACTTTTTTTA CGCGGCTGGTGTGAAGAAGGTGTGGAAGTTTCAAAAGGGTCTCTCGCTGT ATTCAGACACGCACACACTCACACCGACACACACCACACCGTTGGCAGCC GCAATGGCAACCATAACATAACATGTCGCTGTTTCTAGATATCTCACTTG GAGGAGGGCAAGAAGGAGCTCGAACTTCAAGTATCGGAGCTCCGGAACAA GGTGATGCTCGTTGGTAATGTAAAGTTAAAGTGACCAAAGGCATTATCAA CATGTTCTATGCACTACCCGTTCCCTATCTGATCGTGCAGAGCAACACCC GATAAAGATATGGTACCGTGTAAGAGTACGGCTCCAACGCCTACCGAGTC GGTGTTTTCGAGGAACGATACACATTAATAATATATTGCATATGATATGT TGTCGGTCGGTGTTTTGATACGTTTGTGTCACATTGATTGACACGACTGA GCTATTAGAAGAGTGGTACGTACCATTGTGCCAAAGTAATGAGATATTCG GTTGGCCTCTTACATCAAGTATTTAAGGCTACTTGTTGGTTGATTCGTAG CCCTTCCTGTCGAGACGAAGAAGCTATCCTGCCGATTCGATGTGTGATGA TGGGGGGGCGTTATCAGTGAGTCATGTCTGGTTCGTAGATTCGGTGTTTG TAGCGTTCGAACACAGCCCAGAGAGCTTACAACCAGTCAAAAAGGTCGGT CAGAGGTTTGTATTACAATGTAGATCCCCGCGACAGACGAAAGATTGGAA GAACATGAGAGTGGTGGTTGACCGGCGCGCACGAAGTCTTACCGGGGCAT GGCACCATGAGCATCACCCACGTAACTTCCCAGAACTCTCGTCTCAAGGA AACGTTGGTACGACATATTTTTGGGGTCACGGAGGCGTCAGGCTCGTCGC ATACGGCCTTCCTTGCGCCTTTTTTATGTCCACTCGGTTGAGCTGTCTAT AGGGCCACACGGACGGACAGCATGTTGTTCATTGTGTGTTCTGCCCGTAT TAGAATACTTGTGGCGTTAAGAAGAAGGCGGCTGTATCAGGCAGCCGACA AGCCGGCCCTTGAAATGTTAATCTTGTCCGTACAGCAGACAGGCCCATTT TCACACAGCATGTATATTTCGCGCCCTCGTCATCAGGTTTATTTTCTTGC GGTTCGTAATACGCTCGTCTCCGCAATGTCGACGAATCACGGCATGTATA TATATATATATATACCCTTTTTAACATTTTATTAGCACTCCAGAAAAAAA AAAGTGAGAGCAAGAGTCGCCAGCAATCAATCGTTCACAACTCGTAACAT GACCGGAAGCGGTCGTGCCTCGCCGTGCGGCACGCCTCCTCGCCAGATGG AGGTAATGGAAAGGGAGGAGGCCGAACGGCGGGAGATGGCAAAGCAGAAA CGCCAAGAGGAGGTGGACTTCCTCAAGTACCACGGGCAGCACCTGGAATC TTTCCTCAAGCAATTAGGTCGGTGGTGGGTTACTACCACGGACAGCACCT GGAATTTTCCCTCAAGCAATAAGACGTGGTGGTAAATAGACGTCGATTGA TCGCGTAGGACACACTCATTGAAAAACATAAGACAAAGGTTACTACCACG GACAGCAACTGGAATTTTCCCTCAAGCAATTAGGCGGTGGTGGTAAATAG ACGTCGAGTTGATCGCGTAGGACACATTCATTGAAAAAACATAAGACAAA
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Coding sequence (CDS) from alignment at F-serratus_M_contig994:67956..72155-

>mRNA_F-serratus_M_contig994.21228.1 ID=mRNA_F-serratus_M_contig994.21228.1|Name=mRNA_F-serratus_M_contig994.21228.1|organism=Fucus serratus male|type=CDS|length=1740bp|location=Sequence derived from alignment at F-serratus_M_contig994:67956..72155- (Fucus serratus male)
ATGGATCTCGATACGCGTAAGGTACCTGAGGTCACCGGGGTAGAGAATCT
GATGCAATTCCCCGAGCAGATCCCTCCTACGTTGGTCAAGTACGATCCTC
CGATCTTTGCCGGTCTCGAGCCTTTCCATGGACCTGATAGTCACAGTGAT
AGTAAGGGTCTCGCCACCGCCACAGATGGAGAAAGAGAACAGATAACAGG
AGCAGGTGGTGGTACTATGGGTGGACGAGACGGCCGAGGACACAAGATAC
CCCGCGCAGACGGGCAGGGGAAAACATCCCAGTTGGATGATATGGTGAAC
TCGATGCTGCCACCTCGAGAATGGACTGAAGAGACGGGGACTTGGATTCA
GTACGTGAGCAAGGACCCAGCTACCCGGCTGGCGGTCATAACGCTACAGA
TGGATCTCGATACGCGTAAGGTACCTGAGGTCACCGGGGTAGAGAATCTG
ATGCAATTCCCCGAGCAGATCCCTCCTACGTTGGTCAAGTACGATCCTCC
GATCTTTGCCGGTCTCGAGCCTTTCCATGGACCTGATAGTCACAGTGATA
GTAAGGGTCTCGCCACCGCCACAGATGGAGAAAGAGAACAGATAACAGGA
GCAGGTGGTGGTACTATGGGTGGACGAGACGGCCGAGGACACAAGATACC
CCGCGCAGACGGGCAGGGGAAAACATCCCAGTTGGATGATATGGTGAACT
CGATGCTGCCACCTCGAGAATGGACTGAAGAGACGGGGACTTGGATTCAG
TACGTGAGCAAGGACCCAGCTACCCGGCTGGCGGTCATAACGCTACAGGA
GAAACTTGATAAGAAGCTTCAAGAGCGGCAGGCCTTGGAAACGGGGATTT
GTCCCGTTCGCGAAGATCTTTATACCCAGGCCTTCGGAGAAACTTGATAA
GAAGCTTCAAGAGCGGCAGGCCTTGGAAACGGGGATTTGTCCCGTTCGCG
AAGATCTTTATACCCAGGCCTTCGACGAGCTCATCCGGCAAGTGACTCTC
GACGGCCCGGAGCGCGGGCTACTGTGTCTGCGCGTGCGCGACGAGATAAG
GATGACAATTGACGCTTACAAGACTCTGTTCGATAGCAGCGTGACCTTCG
GCATCAAGAAACAGCTACAGGCGGAACAAGGAATGACCGAAATGGAAGAA
TCGACGAGCTCATCCGGCAAGTGACTCTCGACGGCCCGGAGCGCGGGCTA
CTGTGTCTGCGCGTGCGCGACGAGATAAGGATGACAATTGACGCTTACAA
GACTCTGTTCGATAGCAGCGTGACCTTCGGCATCAAGAAACAGCTACAGG
CGGAACAAGGAATGACCGAAATGGAAGAATCGATATCTCACTTGGAGGAG
GGCAAGAAGGAGCTCGAACTTCAAGTATCGGAGCTCCGGAACAAGATATC
TCACTTGGAGGAGGGCAAGAAGGAGCTCGAACTTCAAGTATCGGAGCTCC
GGAACAAGATGGAGGTAATGGAAAGGGAGGAGGCCGAACGGCGGGAGATG
GCAAAGCAGAAACGCCAAGAGGAGGTGGACTTCCTCAAGTACCACGGGCA
GCACCTGGAATCTTTCCTCAAGCAATTAGGTCGATGGAGGTAATGGAAAG
GGAGGAGGCCGAACGGCGGGAGATGGCAAAGCAGAAACGCCAAGAGGAGG
TGGACTTCCTCAAGTACCACGGGCAGCACCTGGAATCTTTCCTCAAGCAA
TTAGGTCGACGTGGTGGTAAATAGACGTGGTGGTAAATAG
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