prot_F-serratus_M_contig994.21225.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig994.21225.1
Unique Nameprot_F-serratus_M_contig994.21225.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length899
Homology
BLAST of mRNA_F-serratus_M_contig994.21225.1 vs. uniprot
Match: UPI001FB0B751 (ribosomal RNA large subunit methyltransferase I n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB0B751)

HSP 1 Score: 92.0 bits (227), Expect = 8.060e-16
Identity = 56/143 (39.16%), Postives = 81/143 (56.64%), Query Frame = 0
Query:  726 EEEAFAPGRTDGRALVRKVSRGLEVLDLFCGTGGFALNSALGGARSALGVDKSARAVRSSAQNALANDL-AETTSFVRAEALHFARQAASEGRAWDLVVIDPPTL--RRKSNARASNAYARMAGAVSRLLRSGGMLMVVDGSG 865
            ++  F   + + R  +  VS G  VLD++C TGGFALN+ +GGA   +GVD S+ A+  + QN + N+L     SF R +A  F + AAS    WD+V++DPP L  RRK    AS  Y  +     R+++ GG+LM    SG
Sbjct:  247 QKTGFYADQRENRQFISTVSDGQRVLDMYCYTGGFALNAVVGGATDVIGVDSSSPALELANQNIVLNNLDPNRVSFRRNDAADFLKDAASRNELWDIVIMDPPKLAPRRKVLQNASGMYRSLNSLAMRVVKKGGLLMTCSCSG 389          
BLAST of mRNA_F-serratus_M_contig994.21225.1 vs. uniprot
Match: A0A2R6PJS6_ACTCC (Ribosomal RNA large subunit methyltransferase n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6PJS6_ACTCC)

HSP 1 Score: 89.7 bits (221), Expect = 4.650e-15
Identity = 56/143 (39.16%), Postives = 80/143 (55.94%), Query Frame = 0
Query:  726 EEEAFAPGRTDGRALVRKVSRGLEVLDLFCGTGGFALNSALGGARSALGVDKSARAVRSSAQNALANDL-AETTSFVRAEALHFARQAASEGRAWDLVVIDPPTL--RRKSNARASNAYARMAGAVSRLLRSGGMLMVVDGSG 865
            ++  F   + + R  +  +S G  VLD++C +GGFALN+A G AR+  GVD S  A+  + +N + N+L  E  SF+R +A  F + A S    WD+V+IDPP L  RRK    AS  Y  +     RL + GG+LM    SG
Sbjct:  251 QKTGFYTDQRENRHFISTISDGQRVLDMYCYSGGFALNAAHGDARNVTGVDSSLPALELARENIVLNNLDPEKISFLRHDAAAFMKDAVSRNETWDIVIIDPPKLAPRRKVLQSASGMYRNLNSLAMRLTKRGGLLMTCSCSG 393          
BLAST of mRNA_F-serratus_M_contig994.21225.1 vs. uniprot
Match: A0A2I4FI14_JUGRE (ribosomal RNA large subunit methyltransferase I isoform X1 n=5 Tax=Juglans TaxID=16718 RepID=A0A2I4FI14_JUGRE)

HSP 1 Score: 89.7 bits (221), Expect = 5.060e-15
Identity = 55/143 (38.46%), Postives = 81/143 (56.64%), Query Frame = 0
Query:  726 EEEAFAPGRTDGRALVRKVSRGLEVLDLFCGTGGFALNSALGGARSALGVDKSARAVRSSAQNALANDL-AETTSFVRAEALHFARQAASEGRAWDLVVIDPPTL--RRKSNARASNAYARMAGAVSRLLRSGGMLMVVDGSG 865
            ++  F   + + R  +  +S G +VLD+FC +GGFALN+A GGA +  GVD S  A+  + +N + ND+     +F+R +A+ F + A S   +WDLV++DPP L  RRK    A   Y  +     RL R GG+LM    SG
Sbjct:  263 QKTGFYADQRENRQFISTISGGKKVLDIFCYSGGFALNAARGGAVNVTGVDTSLPALELAKENIVLNDMDPRRITFLREDAMEFMKGALSRNESWDLVIVDPPKLAPRRKVLQSALGMYRTLNSLAMRLTRRGGLLMTCSCSG 405          
BLAST of mRNA_F-serratus_M_contig994.21225.1 vs. uniprot
Match: UPI001B7EF8B5 (ribosomal RNA large subunit methyltransferase I isoform X2 n=1 Tax=Juglans microcarpa x Juglans regia TaxID=2249226 RepID=UPI001B7EF8B5)

HSP 1 Score: 89.4 bits (220), Expect = 5.980e-15
Identity = 56/143 (39.16%), Postives = 80/143 (55.94%), Query Frame = 0
Query:  726 EEEAFAPGRTDGRALVRKVSRGLEVLDLFCGTGGFALNSALGGARSALGVDKSARAVRSSAQNALANDL-AETTSFVRAEALHFARQAASEGRAWDLVVIDPPTL--RRKSNARASNAYARMAGAVSRLLRSGGMLMVVDGSG 865
            ++  F   + + R  +  +S G +VLD+FC +GGFALN+A GGA +  GVD S  A+  + +N + ND+     +F+R +A+ F + A S    WDLVV+DPP L  RRK    A   Y  +     RL R GG+LM    SG
Sbjct:  246 QKTGFYADQRENRQFISTISGGKKVLDIFCYSGGFALNAARGGAVNVTGVDTSLPALELAKENIVLNDMDPRRITFLREDAMEFMKGALSRNELWDLVVVDPPKLAPRRKVLQSALGMYRTLNSLAMRLTRRGGLLMTCSCSG 388          
BLAST of mRNA_F-serratus_M_contig994.21225.1 vs. uniprot
Match: UPI001C36BFFF (ribosomal RNA large subunit methyltransferase I isoform X1 n=8 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C36BFFF)

HSP 1 Score: 89.0 bits (219), Expect = 8.250e-15
Identity = 55/143 (38.46%), Postives = 81/143 (56.64%), Query Frame = 0
Query:  726 EEEAFAPGRTDGRALVRKVSRGLEVLDLFCGTGGFALNSALGGARSALGVDKSARAVRSSAQNALANDL-AETTSFVRAEALHFARQAASEGRAWDLVVIDPPTL--RRKSNARASNAYARMAGAVSRLLRSGGMLMVVDGSG 865
            ++  F   + + R  +  +S G +VLD+FC +GGFALN+A GGA +  GVD S  A+  + +N + ND+     +F+R +A+ F + A S   +WD+VV+DPP L  RRK    A   Y  +     RL R GG+LM    SG
Sbjct:  251 QKTGFYADQRENRQFISTISGGKKVLDIFCYSGGFALNAARGGAVNVTGVDTSLPALELAKENIVLNDMDPRRITFLREDAMEFMKGALSRNESWDVVVVDPPKLAPRRKVLQSALGMYRTLNSLAMRLTRRGGLLMTCSCSG 393          
BLAST of mRNA_F-serratus_M_contig994.21225.1 vs. uniprot
Match: A0A251PJU0_PRUPE (PUA domain-containing protein n=5 Tax=Prunus TaxID=3754 RepID=A0A251PJU0_PRUPE)

HSP 1 Score: 88.2 bits (217), Expect = 1.350e-14
Identity = 56/173 (32.37%), Postives = 90/173 (52.02%), Query Frame = 0
Query:  726 EEEAFAPGRTDGRALVRKVSRGLEVLDLFCGTGGFALNSALGGARSALGVDKSARAVRSSAQNALANDLAE-TTSFVRAEALHFARQAASEGRAWDLVVIDPPTL--RRKSNARASNAYARMAGAVSRLLRSGGMLMVVDGSGGEIFETHEEMVRDVFARSGEGCGSQFDVAR 895
            ++  F   + + R  +  +S G  VLD+FC +GGFALN+A GGA + +GVD S  AV  + +N + N++     +F+R +A  F + A S   +WD+V++DPP L  R+K+   AS  Y  +     +L + GG+LM    SG     T   M   +   +    G +  + R
Sbjct:  240 QKTGFYADQRENRQFISTISDGQRVLDMFCYSGGFALNAARGGAVNVIGVDSSLPAVELAKENIVLNNMDPGRITFLREDASEFMKGALSRNESWDIVILDPPKLAPRKKALQNASGMYRNLNSLAMQLTKRGGLLMTCSCSGAM---TQSGMFLRILQGAASAAGRKITILR 409          
BLAST of mRNA_F-serratus_M_contig994.21225.1 vs. uniprot
Match: M5WGM9_PRUPE (PUA domain-containing protein n=13 Tax=Amygdaloideae TaxID=171637 RepID=M5WGM9_PRUPE)

HSP 1 Score: 88.2 bits (217), Expect = 1.370e-14
Identity = 56/173 (32.37%), Postives = 90/173 (52.02%), Query Frame = 0
Query:  726 EEEAFAPGRTDGRALVRKVSRGLEVLDLFCGTGGFALNSALGGARSALGVDKSARAVRSSAQNALANDLAE-TTSFVRAEALHFARQAASEGRAWDLVVIDPPTL--RRKSNARASNAYARMAGAVSRLLRSGGMLMVVDGSGGEIFETHEEMVRDVFARSGEGCGSQFDVAR 895
            ++  F   + + R  +  +S G  VLD+FC +GGFALN+A GGA + +GVD S  AV  + +N + N++     +F+R +A  F + A S   +WD+V++DPP L  R+K+   AS  Y  +     +L + GG+LM    SG     T   M   +   +    G +  + R
Sbjct:  242 QKTGFYADQRENRQFISTISDGQRVLDMFCYSGGFALNAARGGAVNVIGVDSSLPAVELAKENIVLNNMDPGRITFLREDASEFMKGALSRNESWDIVILDPPKLAPRKKALQNASGMYRNLNSLAMQLTKRGGLLMTCSCSGAM---TQSGMFLRILQGAASAAGRKITILR 411          
BLAST of mRNA_F-serratus_M_contig994.21225.1 vs. uniprot
Match: A0A061RB59_9CHLO (Rna binding protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RB59_9CHLO)

HSP 1 Score: 87.8 bits (216), Expect = 2.660e-14
Identity = 56/142 (39.44%), Postives = 82/142 (57.75%), Query Frame = 0
Query:  726 EEEAFAPGRTDGRALVRKVSRGLEVLDLFCGTGGFALNSALGGARSALGVDKSARAVRSSAQNALANDLAETTSFVRAEALHFARQAASEGRAWDLVVIDPPTLR--RKSNARASNAYARMAGAVSRLLRSGGMLMVVDGSG 865
            ++  F   + D RA V  + RG  VLDL C +GGFA+++A+ GA +   VD SA A+  + QNA  N +     F R++   F   A  EGRAWD+VV+DPP L   +K+ ARA+N Y  +  +   L+ +GG+L+    SG
Sbjct:  307 QKTGFYADQRDNRAAVAALCRGKRVLDLCCYSGGFAVSAAVHGAAAVTAVDSSAAALELAQQNARLNGV--EVEFARSDVKDFMATARQEGRAWDVVVLDPPKLAPSKKALARAANKYRGLNASAMALVENGGLLLSCSCSG 446          
BLAST of mRNA_F-serratus_M_contig994.21225.1 vs. uniprot
Match: A0A5J4YKT0_PORPP (Ribosomal RNA large subunit methyltransferase I n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YKT0_PORPP)

HSP 1 Score: 84.7 bits (208), Expect = 3.380e-13
Identity = 57/139 (41.01%), Postives = 85/139 (61.15%), Query Frame = 0
Query:  726 EEEAFAPGRTDGRALVRKVSR-GLEVLDLFCGTGGFALNSALGGARSALGVDKSARAVRSSAQNALANDLAETTSFVRAEALHFARQAASEG--RAWDLVVIDPPTL--RRKSNARASNAYARMAGAVSRLLRSGGMLM 859
            ++  F   + + R  VR + R G+EVLDL+C +G FALN A+ GAR  LGVD S  A+R++  NA  N L+E  SFV+ E + +  +A  EG  + +D+V++DPP L  +R   ARA   Y R+     +L+R GG+L+
Sbjct:  385 QKTGFYSDQRENRLHVRSLCRPGMEVLDLYCYSGAFALNCAVSGAR-VLGVDSSEPAIRAATANAAVNGLSEQCSFVQQEVVKYMSEALREGGPQQFDVVILDPPKLAPKRAGLARALGMYRRVNRLALQLVRPGGLLV 522          
BLAST of mRNA_F-serratus_M_contig994.21225.1 vs. uniprot
Match: A0A3B1DTR3_9ZZZZ (23S rRNA (Cytosine(1962)-C(5))-methyltransferase n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1DTR3_9ZZZZ)

HSP 1 Score: 83.6 bits (205), Expect = 3.410e-13
Identity = 57/161 (35.40%), Postives = 88/161 (54.66%), Query Frame = 0
Query:  726 EEEAFAPGRTDGRALVRKVSRGLEVLDLFCGTGGFALNSAL-GGARSALGVDKSARAVRSSAQNALANDLAETTSFVRAEALHFARQAASEGRAWDLVVIDPP--TLRRKSNARASNAYARMAGAVSRLLRSGGMLMVVDGSGGEIFETHEEMVRDVFARS 883
            ++  F   + + R  V K  +G  +LDLFC +G F + +   G A+S +GVD SA A+  + QNA+ N++A+ T FV+A+      Q  SE R +D V++DPP  T  RK  ++A   Y  +     RL+  GG+L+    SG    ET E M+ +V  +S
Sbjct:  212 QKTGFFLDQRENRIAVSKYVKGHHLLDLFCYSGAFGITALKQGNAKSVIGVDSSASAIALAEQNAVLNEVADRTEFVKAKVFDQLEQYQSENRKFDTVILDPPKMTRHRKGLSQAMRGYHSLNEMAVRLIPPGGILVTCSCSGLVDRETFEMMLSNVATKS 372          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig994.21225.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001FB0B7518.060e-1639.16ribosomal RNA large subunit methyltransferase I n=... [more]
A0A2R6PJS6_ACTCC4.650e-1539.16Ribosomal RNA large subunit methyltransferase n=1 ... [more]
A0A2I4FI14_JUGRE5.060e-1538.46ribosomal RNA large subunit methyltransferase I is... [more]
UPI001B7EF8B55.980e-1539.16ribosomal RNA large subunit methyltransferase I is... [more]
UPI001C36BFFF8.250e-1538.46ribosomal RNA large subunit methyltransferase I is... [more]
A0A251PJU0_PRUPE1.350e-1432.37PUA domain-containing protein n=5 Tax=Prunus TaxID... [more]
M5WGM9_PRUPE1.370e-1432.37PUA domain-containing protein n=13 Tax=Amygdaloide... [more]
A0A061RB59_9CHLO2.660e-1439.44Rna binding protein n=1 Tax=Tetraselmis sp. GSL018... [more]
A0A5J4YKT0_PORPP3.380e-1341.01Ribosomal RNA large subunit methyltransferase I n=... [more]
A0A3B1DTR3_9ZZZZ3.410e-1335.4023S rRNA (Cytosine(1962)-C(5))-methyltransferase n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 303..334
e-value: 55.0
score: 12.6
coord: 266..298
e-value: 0.19
score: 20.8
coord: 512..544
e-value: 3.2
score: 16.7
coord: 549..580
e-value: 1.9
score: 17.5
coord: 475..507
e-value: 7.3E-5
score: 32.2
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 184..325
e-value: 6.0E-15
score: 55.0
coord: 431..590
e-value: 1.5E-11
score: 43.8
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10coord: 140..281
e-value: 3.7E-14
score: 54.5
coord: 425..606
e-value: 4.5E-20
score: 73.9
IPR007848Methyltransferase small domainPFAMPF05175MTScoord: 742..862
e-value: 1.8E-9
score: 37.4
NoneNo IPR availableGENE3D3.40.50.150coord: 720..893
e-value: 4.7E-35
score: 123.0
NoneNo IPR availablePANTHERPTHR42873FAMILY NOT NAMEDcoord: 736..883
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 739..884

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig994contigF-serratus_M_contig994:13602..23880 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig994.21225.1mRNA_F-serratus_M_contig994.21225.1Fucus serratus malemRNAF-serratus_M_contig994 13542..24907 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig994.21225.1 ID=prot_F-serratus_M_contig994.21225.1|Name=mRNA_F-serratus_M_contig994.21225.1|organism=Fucus serratus male|type=polypeptide|length=899bp
MWPTPHYLLSPFAGFPQGPPVFGAISPRPLGVSQHFAAEHATGADFISSI
VKSSSTSTSRRRLLLTARLEDSSVVTGVLETKTRKGPTTPTRPLVTEALT
SVLGKFTPSQLKRALDTREGGELERLLRGPGSDGERAACQLRNLLEAVVS
VVGKEKNDSAVKVITGCSALLLWESRTLRGRVDNLLAKDGVCSEEVSQLI
VAFPSFLTLSPGARDTIGHLLGTVGLTAKEVARLAKRRPHVLESSEFWRL
VDVFLNDLEISKTDLRKMIRSQPSLLSLSLTGDAQRNLKFLVEEMGLGKD
QVAKIVRTHPQVLTLNLDNNIRPVVQWLGSPDPSARIATGLSSTRGPEDP
RGPTTSAEKSSLQSYYPYSAAAAGSHGEEHRQQDGCDGDVILGLAEGREL
NETGLLSSLSAGETPIKVPAYVCGEWEWGLGLGPEERKRVIFKQGDMLWK
SVPGNLAKSTAWFVEEVGLSWDAMRKLTARSPALLCLSVENNLRPTLKFL
LEELGMDRTTLKQTIVNQPTLLTLSVPGNLRPKVTLFRDELGVLEGDIAD
LLNQCPRVMNASVKGRILPRFQAMRDAGVSPAFSDLRAICNYTESRFSDW
LERHTKPLPHGAASSSTNREASPSKTAAGKTCESRGAGDVGSDAEAAGLQ
SRPCRSVVRGSGEAARPSFRANSLAELGISYAVRSLLPNGERAPSATVRR
STAAMGASGKASVPPTRSSLDSAVTEEEAFAPGRTDGRALVRKVSRGLEV
LDLFCGTGGFALNSALGGARSALGVDKSARAVRSSAQNALANDLAETTSF
VRAEALHFARQAASEGRAWDLVVIDPPTLRRKSNARASNAYARMAGAVSR
LLRSGGMLMVVDGSGGEIFETHEEMVRDVFARSGEGCGSQFDVARGRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
IPR038538MTERF_sf
IPR007848Small_mtfrase_dom
IPR029063SAM-dependent_MTases