mRNA_F-serratus_M_contig994.21225.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig994.21225.1
Unique NamemRNA_F-serratus_M_contig994.21225.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig994.21225.1 vs. uniprot
Match: D8LEJ3_ECTSI (Methyltranfer_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEJ3_ECTSI)

HSP 1 Score: 285 bits (730), Expect = 8.700e-77
Identity = 315/887 (35.51%), Postives = 405/887 (45.66%), Query Frame = 1 
Query:  337 PLVTEALTSVLGKFTPSQLKRALDTREGGELERLLRGPGSDGERAACQLRNLLEAVVSVV--GKEKND----SAVKVITGCSALLLWESRTLRGRVDNLLAKDGVCSEEVSQLIVAFPSFLTLSPGARDTIGHLLGTVGLTAKEVARLAKRRPHVLES---SEFWRLVDVFLNDLEISKTDLRKMIRSQPSLLSLSLTGDAQRNLKFLVEEMGLXXXXXXXXXXXXXXXXXXXXDNNIRPVVQWLGSPDPSARIATGL-------------------------------------------SSTRGPEDPRGPTTSAEKSSLQSYYPYSAAAAGSHGEEHRQQDGCDGDVILGLAEGRELNETGLLSSLSAGETP------IKVPAYVCGE-WEWGLGLGPEERKRVIFKQGDMLWKSVPGNLAKSTAWFVEEVGLSWDAMRKLTARSPALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMRDAGVSPAFSDLRAICNYTESRFSDWLERHTKPLPHGAASSSTNREASPSKTAAGKTCESRGAGDVGSDAEAAGLQSRPCRSVVRGSGEAARPSFRANSLAELGISYAVRSLLPNGERAPSATVRRSTAAMGASGKASVPPTRSSLDSAVTEEEAFAPGRTDGRALVRKVSRGLEVLDLFCGTGGFALNSALGGARSALGVDKSARAVRSSAQNALANDLAETTSFVRAEALHFARQAA----------------------SEGRAWDLVVIDPPTLRRKS---NARASNAYARMAGAVSRLLR-SGGMLMVVDGSGGEIFETHEEMVRDVFARSGEGCGSQFDVA 2742
            P     L   LG      L+    +    +LE  L G G+   RA  +LR LLEAV SVV   +EK+D    +A +V+ GC ALLL + + L  R   L   +GV  E  +QL V +P + TL P AR  IG  +G VGLTAK+V RLAKRRP V+E+       RLVD+ L DL + K  L +M+R                           XXXXXXXXXXXXXXXXXXXX   IRPVV WLG+PDP A+                                                +S R   +P G    + +  + +     A  AG   +         G++ L  A   E+   G      AG  P      + VP Y  G         G EER++++ KQGD+LWKSV GNLAKS +WFVEEVGLSW             XXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                           AMR AG  PAF  LRA+CNY E RFS WLER        ++ ++ +   SPS+   G+         +G DA+                 +    S    SLAELG++YA  ++      AP    RR                             FAPGR + +ALVRK++RGL+VLDL CGTGGFALN+A GGARS +GVDK+ARAVR++ +NA AN L +  +F++A+   FA  +                        E +AWDLVV+DPP+   KS    ARA  A+ R+A +V+ ++R SGGML+VV   G  +F+T EEM   VF  +    G    ++
Sbjct:   72 PFTVAILLESLGDVPQRTLRHLAGSPPASQLELTLSGSGARASRAQAKLRGLLEAVESVVVGAQEKDDGLASAATRVVAGCPALLLLDGKELLNRGTQLRDMEGVTEETAAQLAVEYPGYFTLPPAARARIGFFVGKVGLTAKDVGRLAKRRPDVIENIGGGHVRRLVDLLLEDLHVGKAALLRMVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRPVVDWLGAPDPEAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASVRQTTNPSGLDRKSGRDRIAA-----ATTAGFPDDA--------GELTLRRAAREEVAAVGQ----GAGPEPQRAEPTLAVPVYTEGVGXXXXXXFGREERRKIVCKQGDLLWKSVVGNLAKSASWFVEEVGLSWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------------------AMRAAGAPPAFRHLRALCNYPEDRFSAWLERIVLDADDSSSPATASSAVSPSRPRPGRR--------LGGDAD-----------------DPPTSSLSTTSLAELGLTYAAATM-----NAP----RRQXXXXXXXXXX--------XXXXXXXXXXFAPGRAEVKALVRKLARGLDVLDLMCGTGGFALNAAAGGARSVIGVDKAARAVRTATKNARANGLDDAATFLKADVAAFAGASXXXXXXXXXXXXXXXXXXXXXGPGERKAWDLVVVDPPSFLAKSARSTARAVKAFTRLAESVALVVRPSGGMLVVVYEPGDGVFDTPEEMTA-VFTSAASAAGVSLSLS 839
[Close]
BLAST of mRNA_F-serratus_M_contig994.21225.1 vs. uniprot
Match: A0A4D9CY43_9STRA (PUA domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CY43_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 6.900e-18
Identity = 65/180 (36.11%), Postives = 103/180 (57.22%), Query Frame = 1 
Query: 2236 EEEAFAPGRTDGRALVRKVSRGLEVLDLFCGTGGFALNSALGGARSALGVDKSARAVRSSAQNALANDLAETTSFVRAEALHFARQAASEG-RAWDLVVIDPPTLR--RKSNARASNAYARMAGAVSRLLRSGGMLMVVDGSGGEIFETHEEMVRDVFARSGEGCGSQFDVARGRR*EPC 2766
            ++  F   +   R +++ +SRG  VLDLFC TGGFALN+A GGAR A+GVD SA A+ ++ +NA ANDL    +F +++ L +AR     G +A+D+V+ DPP L   R+   RA + Y ++  AV R++ SGG+++    S   + +  EE  R +  ++    G    + +     PC
Sbjct:  313 QKTGFYCDQRQNRQMIQSLSRGKRVLDLFCYTGGFALNAARGGAREAIGVDSSALAIETAMENARANDLEGHVTFCKSDVLVYARDLGKTGEKAFDIVIADPPKLAPTRRDLPRALHKYLKINRAVFRMVASGGLVLTHTCSAA-LTQDPEEF-RKMVTQAAHDVGRSITILQVSHAAPC 490
[Close]
BLAST of mRNA_F-serratus_M_contig994.21225.1 vs. uniprot
Match: A0A7J0DJW2_9ERIC (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein n=1 Tax=Actinidia rufa TaxID=165716 RepID=A0A7J0DJW2_9ERIC)

HSP 1 Score: 92.4 bits (228), Expect = 6.200e-17
Identity = 57/143 (39.86%), Postives = 81/143 (56.64%), Query Frame = 1 
Query: 2236 EEEAFAPGRTDGRALVRKVSRGLEVLDLFCGTGGFALNSALGGARSALGVDKSARAVRSSAQNALANDL-AETTSFVRAEALHFARQAASEGRAWDLVVIDPPTL--RRKSNARASNAYARMAGAVSRLLRSGGMLMVVDGSG 2655
            ++  F   + + R  +  +S G  VLD++C +GGFALN+A GGAR+  GVD S  A+  + +N + N+L  E  SF+R +A  F + A S    WD+V+IDPP L  RRK    AS  Y  +     RL + GG+LM    SG
Sbjct:   14 QKTGFYTDQRENRHFISTISDGQRVLDMYCYSGGFALNAAHGGARNVTGVDSSLPALELARENIVLNNLDPEKISFLRHDAAAFMKDAVSRNETWDIVIIDPPKLAPRRKVLQSASGMYRNLNSLAMRLTKRGGLLMTCSCSG 156
[Close]
BLAST of mRNA_F-serratus_M_contig994.21225.1 vs. uniprot
Match: A0A835QIH7_VANPL (PUA domain-containing protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835QIH7_VANPL)

HSP 1 Score: 95.1 bits (235), Expect = 1.270e-16
Identity = 56/143 (39.16%), Postives = 84/143 (58.74%), Query Frame = 1 
Query: 2236 EEEAFAPGRTDGRALVRKVSRGLEVLDLFCGTGGFALNSALGGARSALGVDKSARAVRSSAQNALANDL-AETTSFVRAEALHFARQAASEGRAWDLVVIDPPTL--RRKSNARASNAYARMAGAVSRLLRSGGMLMVVDGSG 2655
            ++  F   + D R L+  +S+ L VLD+FC +GGFALN+A GGA   +G+D S  A+  + +N   N+L  +  SF++ +A  F + AAS+   WDLV++DPP L  RRK    AS  Y R+     ++ + GG+LM    SG
Sbjct:  247 QKTGFYADQRDNRCLIHAISKNLRVLDVFCYSGGFALNAAAGGADHVIGIDSSLPALELAKENVQLNNLDPDKISFLKEDAAEFMKCAASKNELWDLVILDPPKLAPRRKVLQSASGMYRRLNSLAMQITKRGGLLMTCSCSG 389
[Close]
BLAST of mRNA_F-serratus_M_contig994.21225.1 vs. uniprot
Match: UPI000C1CF87F (uncharacterized protein LOC111402390 isoform X1 n=2 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CF87F)

HSP 1 Score: 94.7 bits (234), Expect = 1.680e-16
Identity = 57/143 (39.86%), Postives = 83/143 (58.04%), Query Frame = 1 
Query: 2236 EEEAFAPGRTDGRALVRKVSRGLEVLDLFCGTGGFALNSALGGARSALGVDKSARAVRSSAQNALANDLAE-TTSFVRAEALHFARQAASEGRAWDLVVIDPPTL--RRKSNARASNAYARMAGAVSRLLRSGGMLMVVDGSG 2655
            ++  F   + + R L+  +S G + LD+FC TGGFALN+A GGA SA GVD S  A+  + +N + N L     SF+R +A  F + A ++G +WD+V++DPP L  RRK    AS  Y  +     ++ R GG+LM    SG
Sbjct:  246 QKTGFYADQRENRKLISSISEGQKTLDIFCYTGGFALNAACGGALSATGVDSSLPALEVANENIVLNGLDPGRISFLRQDATEFMKNAITKGESWDIVILDPPKLAPRRKVLQSASGMYRNLNSLAMQITRRGGLLMTCSCSG 388
[Close]
BLAST of mRNA_F-serratus_M_contig994.21225.1 vs. uniprot
Match: A0A2K1IND2_PHYPA (PUA domain-containing protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IND2_PHYPA)

HSP 1 Score: 95.1 bits (235), Expect = 1.690e-16
Identity = 60/143 (41.96%), Postives = 83/143 (58.04%), Query Frame = 1 
Query: 2236 EEEAFAPGRTDGRALVRKVSRGLEVLDLFCGTGGFALNSALGGARSALGVDKSARAVRSSAQNALANDL-AETTSFVRAEALHFARQAASEGRAWDLVVIDPPTL--RRKSNARASNAYARMAGAVSRLLRSGGMLMVVDGSG 2655
            ++  F   + D R L+R ++ G  VLDL C +GGFALN+ALGGA    GVD S+ A+  +  NA  N L A +  FV+A+   + + A SEG+ WD+VV+DPP L   RK   RA+  Y  +     RL + GG+LM    SG
Sbjct:  282 QKTGFYADQRDSRLLLRSLASGSSVLDLCCYSGGFALNAALGGASYITGVDSSSPALELAKSNASLNRLDANSIDFVKADVAEYMKSALSEGKQWDIVVLDPPKLAPNRKVLQRATAKYRNLNAMAIRLTKPGGLLMTCSCSG 424
[Close]
BLAST of mRNA_F-serratus_M_contig994.21225.1 vs. uniprot
Match: UPI0019298C57 (ribosomal RNA large subunit methyltransferase I isoform X1 n=4 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0019298C57)

HSP 1 Score: 94.0 bits (232), Expect = 3.180e-16
Identity = 54/143 (37.76%), Postives = 84/143 (58.74%), Query Frame = 1 
Query: 2236 EEEAFAPGRTDGRALVRKVSRGLEVLDLFCGTGGFALNSALGGARSALGVDKSARAVRSSAQNALANDL-AETTSFVRAEALHFARQAASEGRAWDLVVIDPPTL--RRKSNARASNAYARMAGAVSRLLRSGGMLMVVDGSG 2655
            ++  F   + + R L+  +S+G +VLD+FC +GGFALN+A GGA   +G+D S+ A+  + +N   N    E  SF+R +A  F ++AAS  + WD+V++DPP L  RRK    AS  Y  +     ++ + GG+LM    SG
Sbjct:  253 QKTGFYADQRENRRLISLISKGQKVLDVFCYSGGFALNAAKGGAEYVIGIDSSSPALELAEENVRLNKFNPEKISFMRKDATEFMKEAASRQKVWDIVILDPPKLAPRRKVLQNASGMYRNLNSLAMKITKKGGLLMTCSCSG 395
[Close]
BLAST of mRNA_F-serratus_M_contig994.21225.1 vs. uniprot
Match: A0A835H6G6_9MAGN (PUA domain-containing protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835H6G6_9MAGN)

HSP 1 Score: 93.6 bits (231), Expect = 4.310e-16
Identity = 55/143 (38.46%), Postives = 83/143 (58.04%), Query Frame = 1 
Query: 2236 EEEAFAPGRTDGRALVRKVSRGLEVLDLFCGTGGFALNSALGGARSALGVDKSARAVRSSAQNALANDL-AETTSFVRAEALHFARQAASEGRAWDLVVIDPPTL--RRKSNARASNAYARMAGAVSRLLRSGGMLMVVDGSG 2655
            ++  F   + D R  +  +++G  VLD+ C +GGFALNSA GGA + +G+D S  A+  + +N   N+L  E  SF+R +A  F ++A S   +WDLV++DPP L  RRK    AS  Y  +     ++ +SGG+LM    SG
Sbjct:  241 QKTGFYADQRDNRQFISSIAQGQNVLDMCCYSGGFALNSASGGAENVIGIDSSLPALELAKENIALNNLDPERISFLRKDATEFMKEAVSRQESWDLVILDPPKLAPRRKDLQGASGMYRNLNSLAMQVTKSGGLLMTCSCSG 383
[Close]
BLAST of mRNA_F-serratus_M_contig994.21225.1 vs. uniprot
Match: A0A2G5DXP2_AQUCA (PUA domain-containing protein n=3 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5DXP2_AQUCA)

HSP 1 Score: 92.8 bits (229), Expect = 6.870e-16
Identity = 64/181 (35.36%), Postives = 92/181 (50.83%), Query Frame = 1 
Query: 2236 EEEAFAPGRTDGRALVRKVSRGLEVLDLFCGTGGFALNSALGGARSALGVDKSARAVRSSAQNALANDLAE-TTSFVRAEALHFARQAASEGRAWDLVVIDPPTL--RRKSNARASNAYARMAGAVSRLLRSGGMLMVVDGSG-----GEIFETHEEMVR------DVFARSGEGCGSQFD 2736
            ++  F   + D R  +  ++ G +VLDL C +GGFALNSA GGA S +GVD S  A+  + +N   N+L     SF++ +A  F + AAS   +WDLV++DPP L  RRK   +AS  Y  +     ++ + GG+LM    SG     G    T +           V  +SG GC    D
Sbjct:  242 QKTGFYADQRDNRQFISSIAEGQKVLDLCCYSGGFALNSARGGATSVIGVDSSLPALELAKENIFLNNLNPGMISFLKEDATQFMKGAASRHESWDLVILDPPKLAPRRKDLQKASGMYRNLNSLAMQVTKRGGLLMTCSCSGAMTQSGMFLRTLQGAASMAGRKVTVLRQSGAGCDHPID 422
[Close]
BLAST of mRNA_F-serratus_M_contig994.21225.1 vs. uniprot
Match: A0A7I8L8E6_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8L8E6_SPIIN)

HSP 1 Score: 92.8 bits (229), Expect = 7.410e-16
Identity = 60/173 (34.68%), Postives = 93/173 (53.76%), Query Frame = 1 
Query: 2236 EEEAFAPGRTDGRALVRKVSRGLEVLDLFCGTGGFALNSALGGARSALGVDKSARAVRSSAQNALANDLAETT-SFVRAEALHFARQAASEGRAWDLVVIDPPTL--RRKSNARASNAYARMAGAVSRLLRSGGMLMVVDGSGGEIFETHEEMVRDVFARSGEGCGSQFDVAR 2745
            ++  F   + + R L+  +S+G  VLD+ C +GGFALNSA GGA   +GVD S  A+  + +N + N++  +  SFV+ +A  F + AAS   +WDLV++DPP L  RRK+   AS  Y  +     ++ R GG+LM    SG     T   +  ++   +    G +  V R
Sbjct:  251 QKTGFYADQRESRQLITSISKGKRVLDICCYSGGFALNSARGGAIDVIGVDSSLPALELARENIVLNEMDPSRISFVKEDATAFMKGAASRQESWDLVILDPPKLAPRRKALQSASGMYRSLNSLAMKITRPGGLLMTCSCSGAM---TQSGIFLNILQNAASMAGRKITVLR 420
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig994.21225.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEJ3_ECTSI8.700e-7735.51Methyltranfer_dom domain-containing protein n=2 Ta... [more]
A0A4D9CY43_9STRA6.900e-1836.11PUA domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7J0DJW2_9ERIC6.200e-1739.86S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A835QIH7_VANPL1.270e-1639.16PUA domain-containing protein n=1 Tax=Vanilla plan... [more]
UPI000C1CF87F1.680e-1639.86uncharacterized protein LOC111402390 isoform X1 n=... [more]
A0A2K1IND2_PHYPA1.690e-1641.96PUA domain-containing protein n=3 Tax=Physcomitriu... [more]
UPI0019298C573.180e-1637.76ribosomal RNA large subunit methyltransferase I is... [more]
A0A835H6G6_9MAGN4.310e-1638.46PUA domain-containing protein n=1 Tax=Coptis chine... [more]
A0A2G5DXP2_AQUCA6.870e-1635.36PUA domain-containing protein n=3 Tax=Thalictroide... [more]
A0A7I8L8E6_SPIIN7.410e-1634.68Hypothetical protein n=2 Tax=Spirodela intermedia ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig994contigF-serratus_M_contig994:13542..24907 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score104.0
Seed ortholog evalue3.8e-19
Seed eggNOG ortholog554065.XP_005843989.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.S-adenosylmethionine-dependent methyltransferase
EggNOG OGs2QS1I@2759,34H8I@3041,37IID@33090,COG1092@1
COG Functional cat.J
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
Exons12
Model size3727
Cds size2697
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig994.21225.1prot_F-serratus_M_contig994.21225.1Fucus serratus malepolypeptideF-serratus_M_contig994 13602..23880 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932790.8961043-UTR-F-serratus_M_contig994:13541..136011622932790.8961043-UTR-F-serratus_M_contig994:13541..13601Fucus serratus maleUTRF-serratus_M_contig994 13542..13601 +
1690964477.2680688-UTR-F-serratus_M_contig994:13541..136011690964477.2680688-UTR-F-serratus_M_contig994:13541..13601Fucus serratus maleUTRF-serratus_M_contig994 13542..13601 +
1622932791.10925-UTR-F-serratus_M_contig994:23880..244921622932791.10925-UTR-F-serratus_M_contig994:23880..24492Fucus serratus maleUTRF-serratus_M_contig994 23881..24492 +
1690964477.4222054-UTR-F-serratus_M_contig994:23880..244921690964477.4222054-UTR-F-serratus_M_contig994:23880..24492Fucus serratus maleUTRF-serratus_M_contig994 23881..24492 +
1622932791.1310542-UTR-F-serratus_M_contig994:24549..249071622932791.1310542-UTR-F-serratus_M_contig994:24549..24907Fucus serratus maleUTRF-serratus_M_contig994 24550..24907 +
1690964477.4332848-UTR-F-serratus_M_contig994:24549..249071690964477.4332848-UTR-F-serratus_M_contig994:24549..24907Fucus serratus maleUTRF-serratus_M_contig994 24550..24907 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932790.910991-CDS-F-serratus_M_contig994:13601..141651622932790.910991-CDS-F-serratus_M_contig994:13601..14165Fucus serratus maleCDSF-serratus_M_contig994 13602..14165 +
1690964477.2826562-CDS-F-serratus_M_contig994:13601..141651690964477.2826562-CDS-F-serratus_M_contig994:13601..14165Fucus serratus maleCDSF-serratus_M_contig994 13602..14165 +
1622932790.9254663-CDS-F-serratus_M_contig994:14721..148261622932790.9254663-CDS-F-serratus_M_contig994:14721..14826Fucus serratus maleCDSF-serratus_M_contig994 14722..14826 +
1690964477.2940545-CDS-F-serratus_M_contig994:14721..148261690964477.2940545-CDS-F-serratus_M_contig994:14721..14826Fucus serratus maleCDSF-serratus_M_contig994 14722..14826 +
1622932790.9433403-CDS-F-serratus_M_contig994:15045..151621622932790.9433403-CDS-F-serratus_M_contig994:15045..15162Fucus serratus maleCDSF-serratus_M_contig994 15046..15162 +
1690964477.3051674-CDS-F-serratus_M_contig994:15045..151621690964477.3051674-CDS-F-serratus_M_contig994:15045..15162Fucus serratus maleCDSF-serratus_M_contig994 15046..15162 +
1622932790.9586675-CDS-F-serratus_M_contig994:15540..156871622932790.9586675-CDS-F-serratus_M_contig994:15540..15687Fucus serratus maleCDSF-serratus_M_contig994 15541..15687 +
1690964477.3180642-CDS-F-serratus_M_contig994:15540..156871690964477.3180642-CDS-F-serratus_M_contig994:15540..15687Fucus serratus maleCDSF-serratus_M_contig994 15541..15687 +
1622932790.9709096-CDS-F-serratus_M_contig994:19544..200391622932790.9709096-CDS-F-serratus_M_contig994:19544..20039Fucus serratus maleCDSF-serratus_M_contig994 19545..20039 +
1690964477.3296049-CDS-F-serratus_M_contig994:19544..200391690964477.3296049-CDS-F-serratus_M_contig994:19544..20039Fucus serratus maleCDSF-serratus_M_contig994 19545..20039 +
1622932790.9894788-CDS-F-serratus_M_contig994:20665..207761622932790.9894788-CDS-F-serratus_M_contig994:20665..20776Fucus serratus maleCDSF-serratus_M_contig994 20666..20776 +
1690964477.3424764-CDS-F-serratus_M_contig994:20665..207761690964477.3424764-CDS-F-serratus_M_contig994:20665..20776Fucus serratus maleCDSF-serratus_M_contig994 20666..20776 +
1622932791.0060618-CDS-F-serratus_M_contig994:21395..215721622932791.0060618-CDS-F-serratus_M_contig994:21395..21572Fucus serratus maleCDSF-serratus_M_contig994 21396..21572 +
1690964477.354727-CDS-F-serratus_M_contig994:21395..215721690964477.354727-CDS-F-serratus_M_contig994:21395..21572Fucus serratus maleCDSF-serratus_M_contig994 21396..21572 +
1622932791.024773-CDS-F-serratus_M_contig994:21772..222851622932791.024773-CDS-F-serratus_M_contig994:21772..22285Fucus serratus maleCDSF-serratus_M_contig994 21773..22285 +
1690964477.3690674-CDS-F-serratus_M_contig994:21772..222851690964477.3690674-CDS-F-serratus_M_contig994:21772..22285Fucus serratus maleCDSF-serratus_M_contig994 21773..22285 +
1622932791.0397365-CDS-F-serratus_M_contig994:22471..225641622932791.0397365-CDS-F-serratus_M_contig994:22471..22564Fucus serratus maleCDSF-serratus_M_contig994 22472..22564 +
1690964477.3797965-CDS-F-serratus_M_contig994:22471..225641690964477.3797965-CDS-F-serratus_M_contig994:22471..22564Fucus serratus maleCDSF-serratus_M_contig994 22472..22564 +
1622932791.05627-CDS-F-serratus_M_contig994:23026..232231622932791.05627-CDS-F-serratus_M_contig994:23026..23223Fucus serratus maleCDSF-serratus_M_contig994 23027..23223 +
1690964477.3903022-CDS-F-serratus_M_contig994:23026..232231690964477.3903022-CDS-F-serratus_M_contig994:23026..23223Fucus serratus maleCDSF-serratus_M_contig994 23027..23223 +
1622932791.08397-CDS-F-serratus_M_contig994:23702..238801622932791.08397-CDS-F-serratus_M_contig994:23702..23880Fucus serratus maleCDSF-serratus_M_contig994 23703..23880 +
1690964477.4040277-CDS-F-serratus_M_contig994:23702..238801690964477.4040277-CDS-F-serratus_M_contig994:23702..23880Fucus serratus maleCDSF-serratus_M_contig994 23703..23880 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig994.21225.1

>prot_F-serratus_M_contig994.21225.1 ID=prot_F-serratus_M_contig994.21225.1|Name=mRNA_F-serratus_M_contig994.21225.1|organism=Fucus serratus male|type=polypeptide|length=899bp
MWPTPHYLLSPFAGFPQGPPVFGAISPRPLGVSQHFAAEHATGADFISSI
VKSSSTSTSRRRLLLTARLEDSSVVTGVLETKTRKGPTTPTRPLVTEALT
SVLGKFTPSQLKRALDTREGGELERLLRGPGSDGERAACQLRNLLEAVVS
VVGKEKNDSAVKVITGCSALLLWESRTLRGRVDNLLAKDGVCSEEVSQLI
VAFPSFLTLSPGARDTIGHLLGTVGLTAKEVARLAKRRPHVLESSEFWRL
VDVFLNDLEISKTDLRKMIRSQPSLLSLSLTGDAQRNLKFLVEEMGLGKD
QVAKIVRTHPQVLTLNLDNNIRPVVQWLGSPDPSARIATGLSSTRGPEDP
RGPTTSAEKSSLQSYYPYSAAAAGSHGEEHRQQDGCDGDVILGLAEGREL
NETGLLSSLSAGETPIKVPAYVCGEWEWGLGLGPEERKRVIFKQGDMLWK
SVPGNLAKSTAWFVEEVGLSWDAMRKLTARSPALLCLSVENNLRPTLKFL
LEELGMDRTTLKQTIVNQPTLLTLSVPGNLRPKVTLFRDELGVLEGDIAD
LLNQCPRVMNASVKGRILPRFQAMRDAGVSPAFSDLRAICNYTESRFSDW
LERHTKPLPHGAASSSTNREASPSKTAAGKTCESRGAGDVGSDAEAAGLQ
SRPCRSVVRGSGEAARPSFRANSLAELGISYAVRSLLPNGERAPSATVRR
STAAMGASGKASVPPTRSSLDSAVTEEEAFAPGRTDGRALVRKVSRGLEV
LDLFCGTGGFALNSALGGARSALGVDKSARAVRSSAQNALANDLAETTSF
VRAEALHFARQAASEGRAWDLVVIDPPTLRRKSNARASNAYARMAGAVSR
LLRSGGMLMVVDGSGGEIFETHEEMVRDVFARSGEGCGSQFDVARGRR*
back to top

mRNA from alignment at F-serratus_M_contig994:13542..24907+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig994.21225.1 ID=mRNA_F-serratus_M_contig994.21225.1|Name=mRNA_F-serratus_M_contig994.21225.1|organism=Fucus serratus male|type=mRNA|length=11366bp|location=Sequence derived from alignment at F-serratus_M_contig994:13542..24907+ (Fucus serratus male)
GATGCCCTCGCATTGGTAGCTACACCTTATACACCTTCCCTTCCCCCAGA
AGGGGAATCGATGTGGCCCACTCCGCATTACTTGTTGTCGCCGTTCGCAG
GTTTTCCCCAAGGTCCTCCTGTGTTTGGTGCCATTTCTCCACGCCCTCTC
GGCGTGTCACAGCACTTTGCAGCAGAACATGCAACAGGGGCGGATTTCAT
TAGCTCCATAGTAAAATCAAGTTCAACATCCACAAGTAGGAGGCGTTTGC
TGCTGACGGCGAGGCTCGAGGATAGCTCAGTTGTCACTGGAGTACTGGAA
ACGAAGACCCGCAAAGGACCAACAACTCCGACGAGACCACTTGTCACCGA
AGCCCTTACATCTGTCCTCGGAAAGTTCACCCCATCCCAGCTCAAGCGAG
CGCTCGACACCCGTGAGGGTGGAGAATTGGAGAGGTTGCTTCGGGGTCCT
GGTTCAGATGGGGAGCGGGCTGCGTGCCAGCTACGCAACCTATTGGAGGC
CGTGGTTAGCGTGGTCGGGAAAGAGAAAAACGATTCCGCCGTCAAGGTGA
TAACGGGCTGTTCGGCCTTACTGCTGTGGGAATCTCGAACGCTACGGGGT
CGAGTTGACAACCTTCTGGCTAAGGTACAGTATATTAGGAGGAAGATCCG
TCGAGTCGCTGAGGAGTTCCCGGTTGGCTCTGAGTTGAAATCAAAACAAC
GGACGATGTAACAGTAGTCGGTCGACAGTATACGTCAGTACGCGTATGAG
TGAGGCTGTTTTAGCTATTAGTTACAAACAAGACTAATTAAACCCTATGA
AGAGGTTTCGTATTTGCAGCCTATGAAATATGATCCACCTAAACATTTTG
ACTTGTTTCCCCCTGACTGGGTGATGCTCAGAAGGTCTAGGCGCGTTCGG
ATTTTTCTTTTTAAACACACTTAATCCAAATTTCGTTTTTCGAACTGCTC
CATGCCGACATTTGCCGTACGTCGTGGTCCACAGTACAGTATCCAAACGA
TCGTTCATGCACTCCAAACGGTATTACGCCCAGAGTGGCCTATATCTTCC
ACACGCACGTCGGTTGATGGAAATGCGGTAATTTGTGCTTTGCGGATGTG
ATCTACCCTTCTTCCGTTCTCACCTTGCTGCCACTACTACTGCTGTACTT
GCCTTTGCTTTCTCTAAAAAACAACAAAAGGACGGGGTCTGCAGCGAAGA
GGTATCGCAACTGATCGTTGCATTCCCGTCTTTCCTGACGCTGTCACCCG
GAGCTCGTGACACGATCGGCCATCTCCTCGGCACGGTGGGTAGAAAAGCG
CACGAACCAGCAGGGGTTAAAGTTAACTTGCTCGTCTTTGGCACATGAAT
CATAACGGCTTTCACCAGGCACGCAGCCCTTCCAATTACCAAGACGCGTT
AACAACACTCAGTTGAACCATTTTGCCCTTCAACATGGGTACATCCAATG
TTGCCCTCCCCATGAAGTAATTCGCTACTCCGGAAACCGTCTCGTGTGAG
GTAGGTGGGATTGACCGCCAAGGAAGTGGCGCGGCTGGCCAAGCGCCGCC
CACACGTGCTGGAATCGAGCGAGTTTTGGCGCCTGGTGGACGTGTTCTTA
AACGATTTGGAGATCAGCAAGGTGAAGCGCGAACGACTTCCGCTTGTTCA
TATTTTCTTTTCCCGTCAACCCTTGTTGGGGGAGAAGGACAAGGGATCGA
TTCCCTCTTGACGCGAGTCTGCTAGCTTTGCTGCCGGCAATCGCCATCAC
TCTTACGCGAATGGCGCAGGCGGCTCCAAAAAAGCCTCTGTACGTTTGTT
GGGAACGCATGATTCCGCTCATATCACCTTGCCGCGCTCTACTACAGAAG
GTAGACGATTGGCGGCGGCGCAGTAATCATTTCTCAACCCTGATGCTACC
GTACATATACCCATTCGTGTCGGCTCACACCGACGGGCTCGTTCACCGCG
CCTGCGGGGTGATGGACGCACGAAAACGAATGGTGGTACTGCTCGATAGA
CGGACTTGCGAAAAATGATTCGCAGTCAGCCAAGTTTGCTGTCTCTGAGC
CTCACGGGAGACGCCCAGCGAAACTTGAAATTTCTCGTGGAAGAAATGGG
GCTCGGAAAGGACCAAGTCGCCAAGATAGTGCGCACCCACCCGCAGGTAA
GCAGAGTGAGGTTATTTCAGCCAGGATGGCGGGCGTTTCTCCAAGGCCCC
AAAACATCCCGACGATACGAGCTTGTCCCGTCCAACTCGAGCCTTTATTA
TCACGTTGAAAATGGATGCGCAGACCATAATAGCGCCCAAGCGAATCTCA
CAAACGAAAAGAGCGAGAATCCGTGAAGATAGAATGTAGGTGGTTGCCAA
TAGGGGACGTTCTCGTCGTCTCGCCGATGATTGCTGTCATCCGCAAATGC
GTGGGGTAGCTCGTGCGAAATCGGGTTGACTTTTTTTTTCTTTTTCTTTT
TCCATGTAACGGTGAAAAGTTGTCACACTCTTTGCGACATAGCTCGTTGA
TGTTGTTGTGGACGGTGGGTGCCGTGTTTGAAGTGATACGACCTCTGTTG
AGTGGGGTCCTTTTACCGCAAGGTTGCCCCACTAGTGTAATGGAAAATCT
CTGAAGGGGATGGGTCTCACACGGGAGCGCGGTAGTGCTGTACTCGGGAT
GTAGTTAGGCAGGCTTGGCATGAACACATGCCAGACGAATATTGAATACC
GATGTATTAATTACGTAGCTGAAGACCCCATCTAGTACTACATCCTATAC
AAAGAGCACCACATGATGAGTCCCAAATACCCAACTGTATAGAAACAGTA
TAACCAGTGTTGGACGGTAAAGGATAAAAGAGACTGACAAAGAAGGGGGA
AAAACAGAGACCAAACAAGTAATCAAGCACACACGACCATCGAAACTACC
ACGAACCTATTGGTCGGAATATTCCAGTAATCTTATCTAAATATGAAAGT
TATACCGTATTCTTACAGTCTCTCCAGCTTTCAGATCAGATAAGATTCAA
TAACGTCGTCAGACAAGCGTTATGACTATTTCCAATTCTACTGAAACTAA
CATTCAAATCCCCACAGTCAATAATGTATCTCCTATCGTAGGCGGGGATA
CATATTTCATCATCCAACATTTCAAAAATAATTTTTACTCTACTGATTTT
ATCGATGTCGCAAGCCGCGTATAACGTCTACGATAGTCTTTCGTATACGA
TCACACGTATCAGTCATCACCGAGAAACATAAACTACCATTTCGACAGTC
GTCAGAAAACGACTGCGGAAAGACAAAATGCTCTTTCAAGGTGTCAAGAC
TATAACATGCATATTTCAAAATGCAGTCAGTCTTTATGTACCAGTTCAGT
TACCAAGAAAGACTTTCATTTCAAAAAGATAGTAATGTTCTAGTCTACGC
AACCAGGCACTACTGTTTACAGTACCTAGAAAAATATATCCTTATCATGG
ATCAACTAATTTCAAAGGCTTTTCATCTCGAGACAGATACTACAATACCG
AAAAACTATAAACTATGATTTCAACACATTTCAAACGCTTTTAATCTCGA
GACAGATACCCTTCATGGCGGAAAAAACCCGAGATGAGTGGATGCTTGTC
CCCGGTTACAGCAGTCACGCGCCCGGTGCATCCAAACAGCTCACACATCC
TTGTACCTGCTTCGGTGGCAAAACGGAAAATGCGATAGACGGCAGAGAGA
GATACAATACAAAAAGGAAAGACACAAAACGGAAAAAGACAAAAACAGTA
TACAGGGCATAGTACAAGCAAGTCTCTTCTCAGGAAATTAAATGCACTGT
AAAAGCCCTGCCTCTATCGAACTGTTGGTACTGGGCATGAGCCCAGTCTG
TTGTCCTTTGCCGTTCCTGCTTCTTCGTCGGTCTCGCGAATTCCTCGCGA
ACAGTGGCTTGTTGGTTGGTTGTTGTGGTGGGTTCTTGTTCGACGCCTAG
TTGGTCAAGCGGTAGCAGAAAGTACTGTTCCCTCGTTCTTATCCATAAGT
ACTGCTCCTGAAGACTTACGTAGTTTGGGTACCGAAGACTATCCTTTCTG
TCCTCAAGCGAGAGAATTTCATTCTCTATTTTTACTTCTTCTTTTGGTGT
TGCGGGTAACCCCGTACTGATCGCGGGCGACGAGGCTGGCGGTGTCTCGG
GTTCGTCTGACCCCGTCACGACCGCGGCGAGTCGCGGCGATGGATCGCAC
TCTGGCGATATGCTGTTTTCTCCGACCTGGTGCTCTCCTAACACACTATC
GGGTTGAGCTGAGATTCTAGGTGGGTAACGTGTAGGCCGCGGAAATTCCG
TCAAAAGGATCATTTCGAGCGACACAGGGAAAATACTCTTCTTGGCTCTA
CTTAGTCTCTTGTTTAGGTTGTCATCGTAGCCCGGCGGAGTGGTAGGCAA
CAGCCTCGCCGGGTAATCCTCTAGCGGGCATCCGAGAACTTCGCAGTTGT
AAGTCCTCAGCAACCAGCTAACCTCTGCCAAACAGTCGTCAAGCTCGCGT
CGCATGAAGGTTCTTATCCTTTCTTCGCGCGCTCGCTTTACCCTGAAATA
CTCTTGCTCATCTATCATTTTTAGGAAGTCAGAAGACAAAACGCTCTCGT
TTCACCTAACCCCTGAAGTCTCCAGCGACCTCCAGTAAAAGCTCAGGCTC
TCTCGGGTTCCCTGGCTTCACGACCGGCGCCCTCCTTCCAGCGCTCTCGG
TCGGTTCCTTGGCCGGTTGTACTCACGCGTACACCTCTCCGGTCCAAATC
CTTCCCTGCTCTCGACAGGCGCGGGCACAGGCAAATTTGTCCTGTAACCC
GAATTCGGGCTCAGCCACGTCCGGGCTTGTTGCACTGATCACGAGGCCCT
TGCTCTCGTGCGGCCGGTGATCCCTCACTCACAGGCGCTATTCTCAAAGC
GCGCTCGACCGGTGGTGCCTCTGGCAGTACGCTCTCCACAGCTTCCTGCC
AATCGGTCGCCACGCCTAAAGCTCCCTTGCTACTCCAGCGTGGCTCTTCG
TCTCAAGCTCTACGCTAACTTGAAGTGATGCCTAAATTTCAAATTCCCAA
AAATACGAAAAAACACAAGTCTCCAAACGATGCCCTCTCTTCTCCAGAGA
CCTTCGATCAATCGTCCACTAGTGTGTTGAGTGGGGTCCTTTTACCGCAA
GGTTGCCCCACAAGTGTAATGGAAAATCTCTGAAGGGGGTGGGTCTCACA
CGGGAGCGCGGTAGTGCTGTACTCGGGATGTAGTTAGGCAGGCTTGGCAT
GAACACATGCCAGACGAATATTGAATACCGATGTATTAATTACGTAGCTG
AAGACCCCATCTAGTACTACAGCCTATACAAAGAGCACCACATGATGAGT
CCCAAATACCCAACTGTATAGAAACAGTATAACCAATGTTGGACGGTAAA
GGATAAAAGAGACTGACAAAGAAGGGGGAAAAACAGAGACCAAACAAGTA
ATCAAGCACACACGACCATCGAAACTACCACGAACCTATTGGTCGGAATA
TTCCAGTAATCTTATCTAAATATGAAAGTTATACCGTATTCTTACAACCT
CATTATTCAACTTCACCTTTTGGAGAGAAGTTGAATATCATGGCGCCGTA
GGCCCGCGAAAATATCGGGGGGGGAAACCCTAGACCGATGTATTACGTGT
GAAAGATTCCTTACCCGGGTCTCCTGAGCACACTTACAAAAAATGAAAAA
AAATAAACGGAAGAGTTCTGTATTTTCTTCAAACACCACTGCGTTTCAAC
TGTAGTCATCGCGTCTGCGGCACCTTCTGCCGAGACATGTTCGAGATCCG
ACGCGATCATACACGCCATTGGTAGCCAAGCGCACGCTTGGGAAAGACTA
TGATGCCAAATGTAGGGAGGAATGTATACCGCTGACCGTGCAAGGATGCT
GTGGAACTGTGACGCGTACGCGCTTTGATAATTTTCCCCGGCTCCCATTC
ATGATGCGCACCTCCTTTTTCGTATTACACTGACCTACTCTCGGCACCAC
CAGGTCCTCACCCTGAACTTGGACAATAACATTCGACCCGTCGTGCAATG
GCTTGGTTCCCCCGATCCATCAGCTCGAATAGCGACCGGGCTATCTTCGA
CAAGAGGACCGGAGGACCCTCGGGGGCCCACCACCTCCGCAGAGAAATCA
TCCCTTCAGAGTTACTACCCGTACTCGGCTGCGGCGGCGGGGTCCCATGG
CGAGGAACATCGACAACAGGATGGGTGCGACGGCGACGTTATCCTCGGCC
TGGCAGAAGGTCGGGAACTGAACGAGACGGGGCTCCTGTCGAGTCTCTCC
GCGGGAGAAACGCCAATTAAAGTGCCGGCCTATGTTTGCGGGGAGTGGGA
GTGGGGCCTTGGTTTGGGGCCTGAAGAGCGGAAGCGAGTTATCTTCAAGC
AGGGCGACATGCTTTGGAAAAGCGTCCCGGGCAACCTCGCGAAGTCAACG
GCCTGGTTCGTGGAAGAAGTTGGCCTGAGCTGGGACGCCATGCGGAAGGT
AATGGATTCATGGACAGTGCGGCATGGTTTCGAGGGCGGGTCCGTCGATA
TCACCGTGTGAGGAAGCGCGAGGTCGAGGAGTACCCCCCCCCCAAAAAAA
AAACACGAGGGCTGGTGGGTGATTATTCACGCGTGGCGCAAAGTATTAAC
GTCGAACCAGGAGGAGGCATCGAGCCTCGGGCAATTTGGCGCCCCAGGGG
TTCTCAAAAGAGCTACCAGGTACATATCTATCCGGCGATGTTGTCTGCGA
GGCGCTTGGGCTCATCGTGATGTTACCTTAAGAGACAAAAATCGACAGTA
TACGGCGCCCTACTTGTGACCTTGATTATTGGTGCTAGGAGGAGACATCC
CCAAGGATGAGCGAAACCTGTTTTGTTAAGCCTTGTGTCTCCGTCCCGGC
ACCATGCAGGAGCGTGGCGCAATGGCTTGTTTTGAGAGAGCGGCATAACT
GAATCCAATCCTTGAGGCACGAACAGCGCCGGTCAGGTTATCAACCTGCT
CTTCTCACTCCTCTGTGAGCATAGTGTAACTTTTGTTCGCCCCGACCATC
CGCGTAGTCCCTCGTTGGTTGATCTTTCGCGCGCTTGATTCGAACCTCCC
CGGAGTGGCCCGACGAACCTGTAGCTCACCGCGCGCTCGCCGGCCCTCCT
GTGTCTGAGCGTGGAGAATAATCTGCGGCCTACGCTGAAGTTCTTGTTGG
AGGAACTCGGCATGGACCGGACCACTTTGAAACAGGTGAAGGCCAATCAA
CGCACACCCGAAGAAATAACTAGTAGCGTGCCGCACGCGGTGTTAGGTTT
TGGTCGGGCTGACGATCATGTCTTCGGATGAAACATATTATGTTGCCCCA
CACCCGTTTCCAAACCACGTTTAGCGGGAGACATCGTGGTGGAGGAAAAT
GTTATTCTCTAATTTATCGAGTACAGATGAGGTGAAGAACGAGAGCAAAC
AGTTTCCGGTGCTTCAAGTTAAGTGTCGCGGCCCCATCCGGTTGCTGTGT
CTTAACTATTTCAACCACTCAAGCTGGCGTGCTCCTTCTCGGCAAGCCTC
CTGCCCAAACTCTTTTCTTTTTTTTTTGCGACCCAGGAGGAAGAATGTGC
AGCAAAGCATTCCACGAGGTTGGATTGGAAGCTCTGCACGTTGAACGGCT
TAGTTTGTGGAAAGCGGTAGCCCTTTTCCGGTACGGGCGTCAGCCTAATA
CGCGAATGGTGCCCGACGTGGCCTTCGTCCTCCCCTGAAAAGGCGCAGCC
CATAGAGCCATTAATGTTCCCCATCCTACGCTGAGTCATATTTGCTTTTA
TTAACCCTCGGACCCATTTCCCTCCGTCTTCCCTCGACCGCACGCCTCCC
GAAGACGATCGTAAACCAGCCGACGCTTCTGACCTTGAGCGTGCCGGGCA
ACTTGCGACCGAAAGTGACGCTGTTCAGAGACGAGCTGGGGGTTCTCGAG
GGCGACATCGCTGACCTTCTCAACCAGTGTCCTCGGGTGATGAACGCTAG
CGTGAAGGGTCGAATACTTCCGAGGTTCCAGGTGCGTCGTCTCTCAAGAA
TCTGATGCTCCTGACAGAACGAGAGAAAGAAAAGTGATATTGCCAAACGT
CGATTCCTTATTGAAAGCCGCTCGTACGATGCTGTCAATCTCGCAGGTTT
CCCGTGTCAAACCCCACTTTTTCTATTACCGCCCAAAGGGTCTACGCGTT
GCAACAACTCCGATTCCCTCCATCCGTGCAGGCGATGCGCGATGCCGGGG
TTAGTCCGGCATTCTCGGACCTCAGAGCAATCTGCAACTACACAGAGTCG
AGATTCTCGGACTGGCTTGAACGGCATACAAAACCCCTTCCCCACGGGGC
AGCCTCCTCTTCCACCAATCGGGAAGCGTCACCTTCAAAGACAGCCGCTG
GCAAGACTTGCGAATCCAGAGGCGCCGGCGATGTTGGAAGCGACGCAGAA
GCAGCGGGCTTGCAATCGCGGCCGTGCAGATCGGTAGTTCGCGGCTCCGG
CGAAGCTGCTCGGCCCAGCTTTCGCGCGAACTCCCTCGCAGAGCTGGGAA
TCTCGTACGCGGTTCGTTCGTTGTTGCCAAACGGCGAGCGTGCGCCATCG
GCTACTGTAAGGCGGTCGACTGCCGCTATGGGGGCATCGGGTAAGGCATC
AGTTCCTCCTACGAGATCGTCGCTTGATTCGGCGGTGACGGAAGAAGAGG
CGTTCGCGCCTGGACGGACAGACGGGAGGGCGCTTGTCCGCAAGGTGCTC
TTCTGTCAATGCTACGCGACGCCTTCGACCGACCGAAAAAAGCGTGCGGA
AGAGTACAGTGCAGTAGAGGGTATTACGCAAAAGAAGGCGTTTCAGAGTT
CAGCGGTATCTGCCGACCGTAGATCCTCCCTTGACTTTAGCTTGGTTGGC
TACGATTTCCCCCCCCTGCGCCCGCCGAAGGTTTCTCGCGGATTGGAGGT
GCTCGATCTGTTCTGTGGAACCGGCGGATTCGCTCTGAACTCGGCCCTCG
GGGGCGCTCGATCGGCTCTAGGGGTGAGGAAGGGAAAGAGAGACCGTGGA
ACACATGGTAGCCTCGTTTTGTGTCGACTAGTTGATGCCTGGATAGCTTG
AAGTATATTATGTCTAAACTTTTGGTTGCTACACCTAGTTTGTCGATCTG
CCTACTCTGAATTGTACGCTGGACTCTCTTTGATTTTCCCCTCTAATGTA
TTACTTGATCTACATATCGTTGAACGGCATTTGTAAACTTATCTCTTTGC
GGTGCTTGCTTCCTATGCTTCGGTTTGGTGCGCGCTGGCGCTTGGGAATC
GATCCTTCGGTCGACTCAGACGAGTGATTCTGCTGGAGACCTCGGTTGTT
GGCAACGATATTCCAACCTCAACACTGCGCCGCTGTACGTATCTTTGGCG
TCGAAGATCGTTCGGGAGACTGGGCTGAAAGCATCGACTAGCCCTCCCTC
CATTTCCCTTCACCCCTTTACTGTCTTGAACGCAGGTTGATAAATCCGCC
CGGGCAGTGCGCTCTTCGGCGCAGAACGCCCTCGCTAACGATCTGGCCGA
AACAACGTCGTTCGTGAGAGCGGAAGCACTGCACTTCGCGAGGCAGGCCG
CGAGCGAGGGTAGAGCGTGGGATCTGGTGGTGATCGACCCGCCAACTCTC
CGTCGCAAGTCGAACGCGCGAGCTTCGAACGCGTGAGCGAGATAAGAAGC
GATCGTCGTCCGTTTCGCCCAGGGAAAACTCCCGCAGTCCCTCCCTGGTT
TTTGCATTTTTGATTGTAGCCGCGTTTTCACTCATACACACTAAGAAAAG
TGTCAGCTTGTATTTATTACGCTGCAGCACCACCTCACGTCCGATCAGCT
TGGGCTACACCAGCGCGCGGGTAACGCCGGTAAACTTGTGATGATGGATG
TAACGGCCGCTGTCACGCCTGAACGATCCAAAAGCGTACCACTCGGACAC
ATTATTGAAGACGTTGTCGGCATCGCATTACGATCAGCACTGTTTTCGAT
CATTTTGAAACCGAATACCGGAACCAACCGAATCTGCCAAGTAATCTTAA
CCTTCGGCTTTAATCGTTCCTCGGTCGAGGTTGAACCCTACTGGACATCC
CCCATTGCCAGTTGTTCGTAATTGCCCACTTGCTGCTACCCCTTTTGCTA
CGGGTCGACAGCTACGCGCGCATGGCCGGCGCCGTCTCTCGCCTTTTGAG
GTCGGGAGGAATGCTCATGGTCGTCGATGGCTCCGGTGGCGAAATCTTCG
AGACGCACGAGGAAATGGTaAGAGATGTTTTCGCTCGAAGCGGCGAGGGT
TGCGGGTCTCAGTTTGACGTTGCTCGAGGCCGGAGGTGAGAGCCATGCGC
CAGGCAGCCCTGATTCTGAGCGTGATGCATCGGAAGCTTCGCGGCGGTTG
ACAAAGGGCACGAGCAGCAGGCGCTCCTCGGTAGACGTAAGCCCTGAAGC
TGGCAGAGTCGAGGATGAAGCCGGTCGAGCGTCGGAGGGAAACGTCGAGG
CCCTTTCGGTGCGTTGGGCTCTGTTTGTGTGCTCGAATGCTCCTCGTAGC
AGCGCCGGCAGCGGTTGACTTGCTCGATAGTCTGGGCTTGTAGGGTCCAT
CCTGGGGGGCACGGGTCTTCCTTCTGAAGGTTGCAATCGATGCCAAGGTT
AAAGGGCTAGAGCTAGCTACCATGTGTGAAAACGCGGTTTGGGAAAAATG
TCGAGGGGTTTTTCAACATCCGGGCGTTAGCTTTGGTTAAAAATATAAAA
TGCACAGTTGGTATAGAAGTAGAAGTAGCCTGCGATGAGACCCAATATAA
ACGAAGTGTGTACTCCGTACGTCGCAATGTTCTTCGTTGCTTCTTGCGGC
CGCAAAATAATCAATTACTAATGGGAATTGCTATTCCTCAAGCGGTTGGT
GCATAAACTCCGCCGCCTTATGTAACGCTGTTAGGCGGTATCAGCGGCGG
CGATGCGTAAGAACACAATAGAGAGCTATTTGTCGAAACAAAACCGCCTC
AAACTCTTCCGATCTTTTGAAAATTCGCGCCACGAGGTGGCTATGCAAGG
AAACATTAGTTACTGTCTGTGTAGAGCATACATACTCTTTCATAGATTAC
CGTACTTGAGTAAATACATGGGGCCGCCAAGAACGAGGGTTGGTGTTAGG
GGGGGGAGTTACAAACGCAGCTGGAGTTAAGTGGTTAGCCACAAGTGTTT
TTACCGTGTTTCATTTCATACCTTGGAGCGGAAAGGATTGGCTCGTACGT
GCGTCCTGTAGAGATTGTTGTTACTGTTTTGATATAGTTTTACGTTTGAA
GATCTACTGTATACACCAAGTATCAGGTATTATGAACCTGATGTGCTGAA
TGCAAGAATATCGCAC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig994:13542..24907+

>mRNA_F-serratus_M_contig994.21225.1 ID=mRNA_F-serratus_M_contig994.21225.1|Name=mRNA_F-serratus_M_contig994.21225.1|organism=Fucus serratus male|type=CDS|length=5394bp|location=Sequence derived from alignment at F-serratus_M_contig994:13542..24907+ (Fucus serratus male)
ATGTGGCCCACTCCGCATTACTTGTTGTCGCCGTTCGCAGGTTTTCCCCA
AGGTCCTCCTGTGTTTGGTGCCATTTCTCCACGCCCTCTCGGCGTGTCAC
AGCACTTTGCAGCAGAACATGCAACAGGGGCGGATTTCATTAGCTCCATA
GTAAAATCAAGTTCAACATCCACAAGTAGGAGGCGTTTGCTGCTGACGGC
GAGGCTCGAGGATAGCTCAGTTGTCACTGGAGTACTGGAAACGAAGACCC
GCAAAGGACCAACAACTCCGACGAGACCACTTGTCACCGAAGCCCTTACA
TCTGTCCTCGGAAAGTTCACCCCATCCCAGCTCAAGCGAGCGCTCGACAC
CCGTGAGGGTGGAGAATTGGAGAGGTTGCTTCGGGGTCCTGGTTCAGATG
GGGAGCGGGCTGCGTGCCAGCTACGCAACCTATTGGAGGCCGTGGTTAGC
GTGGTCGGGAAAGAGAAAAACGATTCCGCCGTCAAGGTGATAACGGGCTG
TTCGGCCTTACTGCTGTGGGAATCTCGAACGCTACGGGGTCGAGTTGACA
ACCTTCTGGCTAAGATGTGGCCCACTCCGCATTACTTGTTGTCGCCGTTC
GCAGGTTTTCCCCAAGGTCCTCCTGTGTTTGGTGCCATTTCTCCACGCCC
TCTCGGCGTGTCACAGCACTTTGCAGCAGAACATGCAACAGGGGCGGATT
TCATTAGCTCCATAGTAAAATCAAGTTCAACATCCACAAGTAGGAGGCGT
TTGCTGCTGACGGCGAGGCTCGAGGATAGCTCAGTTGTCACTGGAGTACT
GGAAACGAAGACCCGCAAAGGACCAACAACTCCGACGAGACCACTTGTCA
CCGAAGCCCTTACATCTGTCCTCGGAAAGTTCACCCCATCCCAGCTCAAG
CGAGCGCTCGACACCCGTGAGGGTGGAGAATTGGAGAGGTTGCTTCGGGG
TCCTGGTTCAGATGGGGAGCGGGCTGCGTGCCAGCTACGCAACCTATTGG
AGGCCGTGGTTAGCGTGGTCGGGAAAGAGAAAAACGATTCCGCCGTCAAG
GTGATAACGGGCTGTTCGGCCTTACTGCTGTGGGAATCTCGAACGCTACG
GGGTCGAGTTGACAACCTTCTGGCTAAGGACGGGGTCTGCAGCGAAGAGG
TATCGCAACTGATCGTTGCATTCCCGTCTTTCCTGACGCTGTCACCCGGA
GCTCGTGACACGATCGGCCATCTCCTCGGCACGGACGGGGTCTGCAGCGA
AGAGGTATCGCAACTGATCGTTGCATTCCCGTCTTTCCTGACGCTGTCAC
CCGGAGCTCGTGACACGATCGGCCATCTCCTCGGCACGGTGGGATTGACC
GCCAAGGAAGTGGCGCGGCTGGCCAAGCGCCGCCCACACGTGCTGGAATC
GAGCGAGTTTTGGCGCCTGGTGGACGTGTTCTTAAACGATTTGGAGATCA
GCAAGGTGGGATTGACCGCCAAGGAAGTGGCGCGGCTGGCCAAGCGCCGC
CCACACGTGCTGGAATCGAGCGAGTTTTGGCGCCTGGTGGACGTGTTCTT
AAACGATTTGGAGATCAGCAAGACGGACTTGCGAAAAATGATTCGCAGTC
AGCCAAGTTTGCTGTCTCTGAGCCTCACGGGAGACGCCCAGCGAAACTTG
AAATTTCTCGTGGAAGAAATGGGGCTCGGAAAGGACCAAGTCGCCAAGAT
AGTGCGCACCCACCCGCAGACGGACTTGCGAAAAATGATTCGCAGTCAGC
CAAGTTTGCTGTCTCTGAGCCTCACGGGAGACGCCCAGCGAAACTTGAAA
TTTCTCGTGGAAGAAATGGGGCTCGGAAAGGACCAAGTCGCCAAGATAGT
GCGCACCCACCCGCAGGTCCTCACCCTGAACTTGGACAATAACATTCGAC
CCGTCGTGCAATGGCTTGGTTCCCCCGATCCATCAGCTCGAATAGCGACC
GGGCTATCTTCGACAAGAGGACCGGAGGACCCTCGGGGGCCCACCACCTC
CGCAGAGAAATCATCCCTTCAGAGTTACTACCCGTACTCGGCTGCGGCGG
CGGGGTCCCATGGCGAGGAACATCGACAACAGGATGGGTGCGACGGCGAC
GTTATCCTCGGCCTGGCAGAAGGTCGGGAACTGAACGAGACGGGGCTCCT
GTCGAGTCTCTCCGCGGGAGAAACGCCAATTAAAGTGCCGGCCTATGTTT
GCGGGGAGTGGGAGTGGGGCCTTGGTTTGGGGCCTGAAGAGCGGAAGCGA
GTTATCTTCAAGCAGGGCGACATGCTTTGGAAAAGCGTCCCGGGCAACCT
CGCGAAGTCAACGGCCTGGTTCGTGGAAGAAGTTGGCCTGAGCTGGGACG
CCATGCGGAAGGTCCTCACCCTGAACTTGGACAATAACATTCGACCCGTC
GTGCAATGGCTTGGTTCCCCCGATCCATCAGCTCGAATAGCGACCGGGCT
ATCTTCGACAAGAGGACCGGAGGACCCTCGGGGGCCCACCACCTCCGCAG
AGAAATCATCCCTTCAGAGTTACTACCCGTACTCGGCTGCGGCGGCGGGG
TCCCATGGCGAGGAACATCGACAACAGGATGGGTGCGACGGCGACGTTAT
CCTCGGCCTGGCAGAAGGTCGGGAACTGAACGAGACGGGGCTCCTGTCGA
GTCTCTCCGCGGGAGAAACGCCAATTAAAGTGCCGGCCTATGTTTGCGGG
GAGTGGGAGTGGGGCCTTGGTTTGGGGCCTGAAGAGCGGAAGCGAGTTAT
CTTCAAGCAGGGCGACATGCTTTGGAAAAGCGTCCCGGGCAACCTCGCGA
AGTCAACGGCCTGGTTCGTGGAAGAAGTTGGCCTGAGCTGGGACGCCATG
CGGAAGCTCACCGCGCGCTCGCCGGCCCTCCTGTGTCTGAGCGTGGAGAA
TAATCTGCGGCCTACGCTGAAGTTCTTGTTGGAGGAACTCGGCATGGACC
GGACCACTTTGAAACAGCTCACCGCGCGCTCGCCGGCCCTCCTGTGTCTG
AGCGTGGAGAATAATCTGCGGCCTACGCTGAAGTTCTTGTTGGAGGAACT
CGGCATGGACCGGACCACTTTGAAACAGACGATCGTAAACCAGCCGACGC
TTCTGACCTTGAGCGTGCCGGGCAACTTGCGACCGAAAGTGACGCTGTTC
AGAGACGAGCTGGGGGTTCTCGAGGGCGACATCGCTGACCTTCTCAACCA
GTGTCCTCGGGTGATGAACGCTAGCGTGAAGGGTCGAATACTTCCGAGGT
TCCAGACGATCGTAAACCAGCCGACGCTTCTGACCTTGAGCGTGCCGGGC
AACTTGCGACCGAAAGTGACGCTGTTCAGAGACGAGCTGGGGGTTCTCGA
GGGCGACATCGCTGACCTTCTCAACCAGTGTCCTCGGGTGATGAACGCTA
GCGTGAAGGGTCGAATACTTCCGAGGTTCCAGGCGATGCGCGATGCCGGG
GTTAGTCCGGCATTCTCGGACCTCAGAGCAATCTGCAACTACACAGAGTC
GAGATTCTCGGACTGGCTTGAACGGCATACAAAACCCCTTCCCCACGGGG
CAGCCTCCTCTTCCACCAATCGGGAAGCGTCACCTTCAAAGACAGCCGCT
GGCAAGACTTGCGAATCCAGAGGCGCCGGCGATGTTGGAAGCGACGCAGA
AGCAGCGGGCTTGCAATCGCGGCCGTGCAGATCGGTAGTTCGCGGCTCCG
GCGAAGCTGCTCGGCCCAGCTTTCGCGCGAACTCCCTCGCAGAGCTGGGA
ATCTCGTACGCGGTTCGTTCGTTGTTGCCAAACGGCGAGCGTGCGCCATC
GGCTACTGTAAGGCGGTCGACTGCCGCTATGGGGGCATCGGGTAAGGCAT
CAGTTCCTCCTACGAGATCGTCGCTTGATTCGGCGGTGACGGAAGAAGAG
GCGTTCGCGCCTGGACGGACAGACGGGAGGGCGCTTGTCCGCAAGGCGAT
GCGCGATGCCGGGGTTAGTCCGGCATTCTCGGACCTCAGAGCAATCTGCA
ACTACACAGAGTCGAGATTCTCGGACTGGCTTGAACGGCATACAAAACCC
CTTCCCCACGGGGCAGCCTCCTCTTCCACCAATCGGGAAGCGTCACCTTC
AAAGACAGCCGCTGGCAAGACTTGCGAATCCAGAGGCGCCGGCGATGTTG
GAAGCGACGCAGAAGCAGCGGGCTTGCAATCGCGGCCGTGCAGATCGGTA
GTTCGCGGCTCCGGCGAAGCTGCTCGGCCCAGCTTTCGCGCGAACTCCCT
CGCAGAGCTGGGAATCTCGTACGCGGTTCGTTCGTTGTTGCCAAACGGCG
AGCGTGCGCCATCGGCTACTGTAAGGCGGTCGACTGCCGCTATGGGGGCA
TCGGGTAAGGCATCAGTTCCTCCTACGAGATCGTCGCTTGATTCGGCGGT
GACGGAAGAAGAGGCGTTCGCGCCTGGACGGACAGACGGGAGGGCGCTTG
TCCGCAAGGTTTCTCGCGGATTGGAGGTGCTCGATCTGTTCTGTGGAACC
GGCGGATTCGCTCTGAACTCGGCCCTCGGGGGCGCTCGATCGGCTCTAGG
GGTTTCTCGCGGATTGGAGGTGCTCGATCTGTTCTGTGGAACCGGCGGAT
TCGCTCTGAACTCGGCCCTCGGGGGCGCTCGATCGGCTCTAGGGGTTGAT
AAATCCGCCCGGGCAGTGCGCTCTTCGGCGCAGAACGCCCTCGCTAACGA
TCTGGCCGAAACAACGTCGTTCGTGAGAGCGGAAGCACTGCACTTCGCGA
GGCAGGCCGCGAGCGAGGGTAGAGCGTGGGATCTGGTGGTGATCGACCCG
CCAACTCTCCGTCGCAAGTCGAACGCGCGAGCTTCGAACGCGTTGATAAA
TCCGCCCGGGCAGTGCGCTCTTCGGCGCAGAACGCCCTCGCTAACGATCT
GGCCGAAACAACGTCGTTCGTGAGAGCGGAAGCACTGCACTTCGCGAGGC
AGGCCGCGAGCGAGGGTAGAGCGTGGGATCTGGTGGTGATCGACCCGCCA
ACTCTCCGTCGCAAGTCGAACGCGCGAGCTTCGAACGCCTACGCGCGCAT
GGCCGGCGCCGTCTCTCGCCTTTTGAGGTCGGGAGGAATGCTCATGGTCG
TCGATGGCTCCGGTGGCGAAATCTTCGAGACGCACGAGGAAATGGTaAGA
GATGTTTTCGCTCGAAGCGGCGAGGGTTGCGGGTCTCAGTTTGACGTTGC
TCGAGGCCGGAGGTGACTACGCGCGCATGGCCGGCGCCGTCTCTCGCCTT
TTGAGGTCGGGAGGAATGCTCATGGTCGTCGATGGCTCCGGTGGCGAAAT
CTTCGAGACGCACGAGGAAATGGTaAGAGATGTTTTCGCTCGAAGCGGCG
AGGGTTGCGGGTCTCAGTTTGACGTTGCTCGAGGCCGGAGGTGA
back to top