prot_F-serratus_M_contig992.21217.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig992.21217.1
Unique Nameprot_F-serratus_M_contig992.21217.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length410
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig992.21217.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 206..228
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 160..205
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 377..410
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 326..347
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 304..325
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 348..376
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 240..268
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 274..292
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 141..159
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 293..303
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 269..273
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 229..239
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..140
NoneNo IPR availableTMHMMTMhelixcoord: 304..326
NoneNo IPR availableTMHMMTMhelixcoord: 348..370
NoneNo IPR availableTMHMMTMhelixcoord: 243..265
NoneNo IPR availableTMHMMTMhelixcoord: 206..228
NoneNo IPR availableTMHMMTMhelixcoord: 140..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig992contigF-serratus_M_contig992:158925..164247 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig992.21217.1mRNA_F-serratus_M_contig992.21217.1Fucus serratus malemRNAF-serratus_M_contig992 158925..164247 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig992.21217.1 ID=prot_F-serratus_M_contig992.21217.1|Name=mRNA_F-serratus_M_contig992.21217.1|organism=Fucus serratus male|type=polypeptide|length=410bp
RLHLICQSTAPIEPGIYVAPNIAHPTQRTTEIYKCPGVMTNRARGRTAGL
RKHACEFIGTSARCCCCSGATSPQKLEGPLPKAVGDDDFKSPEAGLTWTS
SPASPDTAPAIDLEALKTYIPEGSVYLWAAMIDGATATDAIGGWIVLMAQ
ISCYILLLANSSKRTLADLRGDSIVHVPIENDIGNFSTIIIDGTTFIETG
HSSEPLSYALTSISAAVYLVLTFAAGDLRAALALLQTRTLYNMILGAAIL
ASFVLLVVSSLSVLFFFANDNSSFIVGAATVLFISDLDEKLWSALRRVST
NNRLFWCVEAFAISLVLAIAGITWFGNTVATSAGGIELLRIPTTENNVAI
VFTVGFVWLIAPIGATVGAWEVALLLQYIADRHSNEKATSPRNLGNFLVV
EILAMCLILG
back to top