prot_F-serratus_M_contig99.21202.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig99.21202.1
Unique Nameprot_F-serratus_M_contig99.21202.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length44
Homology
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BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: UPI001C26C866 (cytochrome b-c1 complex subunit 6-1, mitochondrial-like n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C26C866)

HSP 1 Score: 52.4 bits (124), Expect = 1.000e-7
Identity = 23/43 (53.49%), Postives = 29/43 (67.44%), Query Frame = 0 
Query:    3 EYKACIDRVEKKGFGT--CEPWFFDYLSCVDKCVAPKIMKVLK 43
            EYK C++RV+    G   C   +FDY SCVDKCVAPK+ + LK
Sbjct:   43 EYKQCVERVDSDDSGQKHCTGQYFDYWSCVDKCVAPKLFQELK 85
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BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: A0A0E0R4L3_ORYRU (UCR_hinge domain-containing protein n=2 Tax=Oryza TaxID=4527 RepID=A0A0E0R4L3_ORYRU)

HSP 1 Score: 53.1 bits (126), Expect = 1.050e-7
Identity = 23/45 (51.11%), Postives = 31/45 (68.89%), Query Frame = 0 
Query:    1 MSEYKACIDRVEKKGFGT--CEPWFFDYLSCVDKCVAPKIMKVLK 43
            + EY+ C+ RVEK   G   C   +FDY SC+DKCVAPK+++ LK
Sbjct:   75 LYEYEKCVKRVEKDDTGHKHCTGQYFDYWSCIDKCVAPKLLEKLK 119
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BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: A0A0Q3IT18_BRADI (UCR_hinge domain-containing protein n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=A0A0Q3IT18_BRADI)

HSP 1 Score: 52.8 bits (125), Expect = 1.060e-7
Identity = 23/45 (51.11%), Postives = 30/45 (66.67%), Query Frame = 0 
Query:    1 MSEYKACIDRVEKKGFGT--CEPWFFDYLSCVDKCVAPKIMKVLK 43
            + EY+ C+ RVE    G   C   +FDYLSC+DKCVAPK+ + LK
Sbjct:   59 LYEYERCVKRVESDDTGHKHCTGQYFDYLSCIDKCVAPKLFEKLK 103
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BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: A0A314XSR3_PRUYE (Cytochrome b-c1 complex subunit 6-like n=1 Tax=Prunus yedoensis var. nudiflora TaxID=2094558 RepID=A0A314XSR3_PRUYE)

HSP 1 Score: 53.5 bits (127), Expect = 1.200e-7
Identity = 24/45 (53.33%), Postives = 30/45 (66.67%), Query Frame = 0 
Query:    1 MSEYKACIDRVEKKGFGT--CEPWFFDYLSCVDKCVAPKIMKVLK 43
            + EY+AC+ RVE    G   C   +FDY+SCVDKCVAPK+   LK
Sbjct:   34 LIEYQACVKRVEGDNNGEKHCTGQYFDYISCVDKCVAPKLFGALK 78
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BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: A0A6P4AWN7_ZIZJJ (Cytochrome b-c1 complex subunit 6 n=2 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P4AWN7_ZIZJJ)

HSP 1 Score: 51.6 bits (122), Expect = 1.400e-7
Identity = 22/45 (48.89%), Postives = 30/45 (66.67%), Query Frame = 0 
Query:    1 MSEYKACIDRVE--KKGFGTCEPWFFDYLSCVDKCVAPKIMKVLK 43
            + EY+AC+ R++  + G   C   +FDY SCVDKCVAPK+   LK
Sbjct:   25 LLEYQACVKRIQGDESGHKHCTGQYFDYWSCVDKCVAPKLFSKLK 69
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001C26C8661.000e-753.49cytochrome b-c1 complex subunit 6-1, mitochondrial... [more]
A0A0E0R4L3_ORYRU1.050e-751.11UCR_hinge domain-containing protein n=2 Tax=Oryza ... [more]
A0A0Q3IT18_BRADI1.060e-751.11UCR_hinge domain-containing protein n=1 Tax=Brachy... [more]
A0A314XSR3_PRUYE1.200e-753.33Cytochrome b-c1 complex subunit 6-like n=1 Tax=Pru... [more]
A0A6P4AWN7_ZIZJJ1.400e-748.89Cytochrome b-c1 complex subunit 6 n=2 Tax=Ziziphus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036811Ubiquinol-cytochrome C reductase hinge domain superfamilyGENE3D1.10.287.20coord: 1..43
e-value: 3.5E-11
score: 45.0
IPR036811Ubiquinol-cytochrome C reductase hinge domain superfamilySUPERFAMILY81531Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)coord: 2..43
IPR023184Ubiquinol-cytochrome C reductase hinge domainPFAMPF02320UCR_hingecoord: 3..43
e-value: 4.8E-13
score: 49.1
NoneNo IPR availablePANTHERPTHR15336:SF8coord: 3..43
IPR003422Cytochrome b-c1 complex, subunit 6PANTHERPTHR15336UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 7.8 KDA PROTEINcoord: 3..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig99contigF-serratus_M_contig99:842685..844585 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig99.21202.1mRNA_F-serratus_M_contig99.21202.1Fucus serratus malemRNAF-serratus_M_contig99 841221..844657 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig99.21202.1 ID=prot_F-serratus_M_contig99.21202.1|Name=mRNA_F-serratus_M_contig99.21202.1|organism=Fucus serratus male|type=polypeptide|length=44bp
MSEYKACIDRVEKKGFGTCEPWFFDYLSCVDKCVAPKIMKVLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036811Ubol_cytC_Rdtase_hinge_dom_sf
IPR023184Ubol_cytC_Rdtase_hinge_dom
IPR003422Cyt_b-c1_6