prot_F-serratus_M_contig99.21202.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig99.21202.1
Unique Nameprot_F-serratus_M_contig99.21202.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length44
Homology
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: A0A6G1C6J6_9ORYZ (Cytochrome b-c1 complex subunit 6 n=5 Tax=Oryza TaxID=4527 RepID=A0A6G1C6J6_9ORYZ)

HSP 1 Score: 53.1 bits (126), Expect = 3.860e-8
Identity = 23/45 (51.11%), Postives = 31/45 (68.89%), Query Frame = 0
Query:    1 MSEYKACIDRVEKKGFGT--CEPWFFDYLSCVDKCVAPKIMKVLK 43
            + EY+ C+ RVEK   G   C   +FDY SC+DKCVAPK+++ LK
Sbjct:   30 LYEYEKCVKRVEKDDTGHKHCTGQYFDYWSCIDKCVAPKLLEKLK 74          
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: V4V6M9_CITCL (UCR_hinge domain-containing protein n=4 Tax=Citrus TaxID=2706 RepID=V4V6M9_CITCL)

HSP 1 Score: 53.9 bits (128), Expect = 3.900e-8
Identity = 24/45 (53.33%), Postives = 31/45 (68.89%), Query Frame = 0
Query:    1 MSEYKACIDRVEKKGFGT--CEPWFFDYLSCVDKCVAPKIMKVLK 43
            + EY+AC+ R+E    G+  C   +FDYLSCVDKCVAPK+   LK
Sbjct:   61 LIEYEACVKRIEADDTGSKHCTGQYFDYLSCVDKCVAPKLFIQLK 105          
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: K3YED0_SETIT (UCR_hinge domain-containing protein n=3 Tax=Setaria TaxID=4554 RepID=K3YED0_SETIT)

HSP 1 Score: 53.9 bits (128), Expect = 4.530e-8
Identity = 24/45 (53.33%), Postives = 30/45 (66.67%), Query Frame = 0
Query:    1 MSEYKACIDRVEKKGFGT--CEPWFFDYLSCVDKCVAPKIMKVLK 43
            + EY+ C+ RVE  G G   C   +FDY SCVDKCVAPK++  LK
Sbjct:   68 LYEYERCVKRVENDGSGQKHCTGQYFDYWSCVDKCVAPKLLDKLK 112          
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: A0A0E0F2V6_9ORYZ (Cytochrome b-c1 complex subunit 6 n=2 Tax=Oryza TaxID=4527 RepID=A0A0E0F2V6_9ORYZ)

HSP 1 Score: 53.1 bits (126), Expect = 5.230e-8
Identity = 23/45 (51.11%), Postives = 31/45 (68.89%), Query Frame = 0
Query:    1 MSEYKACIDRVEKKGFGT--CEPWFFDYLSCVDKCVAPKIMKVLK 43
            + EY+ C+ RVEK   G   C   +FDY SC+DKCVAPK+++ LK
Sbjct:   43 LYEYEKCVKRVEKDDTGHKHCTGQYFDYWSCIDKCVAPKLLEKLK 87          
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: UPI00201A5936 (cytochrome b-c1 complex subunit 6-1, mitochondrial isoform X1 n=2 Tax=Ricinus communis TaxID=3988 RepID=UPI00201A5936)

HSP 1 Score: 53.1 bits (126), Expect = 5.350e-8
Identity = 24/45 (53.33%), Postives = 31/45 (68.89%), Query Frame = 0
Query:    1 MSEYKACIDRVEKKGFGT--CEPWFFDYLSCVDKCVAPKIMKVLK 43
            + EY+ACI R+E +  G   C   +FDYLSCVD+CVAPK+   LK
Sbjct:   44 LIEYEACIKRIEGEDPGQKHCTGQYFDYLSCVDRCVAPKLFSKLK 88          
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: A0A0E0MCT3_ORYPU (Cytochrome b-c1 complex subunit 6 n=1 Tax=Oryza punctata TaxID=4537 RepID=A0A0E0MCT3_ORYPU)

HSP 1 Score: 53.1 bits (126), Expect = 5.730e-8
Identity = 23/45 (51.11%), Postives = 31/45 (68.89%), Query Frame = 0
Query:    1 MSEYKACIDRVEKKGFGT--CEPWFFDYLSCVDKCVAPKIMKVLK 43
            + EY+ C+ RVEK   G   C   +FDY SC+DKCVAPK+++ LK
Sbjct:   47 LYEYEKCVKRVEKDDTGHKHCTGQYFDYWSCIDKCVAPKLLEKLK 91          
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: Q53PN7_ORYSJ (Ubiquinol--cytochrome-c reductase, putative n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q53PN7_ORYSJ)

HSP 1 Score: 53.1 bits (126), Expect = 6.420e-8
Identity = 23/45 (51.11%), Postives = 31/45 (68.89%), Query Frame = 0
Query:    1 MSEYKACIDRVEKKGFGT--CEPWFFDYLSCVDKCVAPKIMKVLK 43
            + EY+ C+ RVEK   G   C   +FDY SC+DKCVAPK+++ LK
Sbjct:   52 LYEYEKCVKRVEKDDTGHKHCTGQYFDYWSCIDKCVAPKLLEKLK 96          
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: A0A0E0F2V4_9ORYZ (UCR_hinge domain-containing protein n=1 Tax=Oryza meridionalis TaxID=40149 RepID=A0A0E0F2V4_9ORYZ)

HSP 1 Score: 53.1 bits (126), Expect = 6.860e-8
Identity = 23/45 (51.11%), Postives = 31/45 (68.89%), Query Frame = 0
Query:    1 MSEYKACIDRVEKKGFGT--CEPWFFDYLSCVDKCVAPKIMKVLK 43
            + EY+ C+ RVEK   G   C   +FDY SC+DKCVAPK+++ LK
Sbjct:   55 LYEYEKCVKRVEKDDTGHKHCTGQYFDYWSCIDKCVAPKLLEKLK 99          
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: I1IU50_BRADI (Cytochrome b-c1 complex subunit 6 n=2 Tax=Brachypodium distachyon TaxID=15368 RepID=I1IU50_BRADI)

HSP 1 Score: 52.0 bits (123), Expect = 9.840e-8
Identity = 24/45 (53.33%), Postives = 29/45 (64.44%), Query Frame = 0
Query:    1 MSEYKACIDRVEKKGFGT--CEPWFFDYLSCVDKCVAPKIMKVLK 43
            + EY+ C+ RVE    G   C   FFDY SCVDKCVAPK+ + LK
Sbjct:   25 LYEYERCVKRVENDESGQKHCTGQFFDYWSCVDKCVAPKLFEQLK 69          
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: C5YS99_SORBI (Cytochrome b-c1 complex subunit 6 n=5 Tax=Panicoideae TaxID=147369 RepID=C5YS99_SORBI)

HSP 1 Score: 52.0 bits (123), Expect = 9.840e-8
Identity = 23/45 (51.11%), Postives = 29/45 (64.44%), Query Frame = 0
Query:    1 MSEYKACIDRVEKKGFGT--CEPWFFDYLSCVDKCVAPKIMKVLK 43
            + +Y+ C+ RVE  G G   C   +FDY SCVDKCVAPK+   LK
Sbjct:   25 LYDYERCVKRVENDGSGQKHCTGQYFDYWSCVDKCVAPKLFDKLK 69          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G1C6J6_9ORYZ3.860e-851.11Cytochrome b-c1 complex subunit 6 n=5 Tax=Oryza Ta... [more]
V4V6M9_CITCL3.900e-853.33UCR_hinge domain-containing protein n=4 Tax=Citrus... [more]
K3YED0_SETIT4.530e-853.33UCR_hinge domain-containing protein n=3 Tax=Setari... [more]
A0A0E0F2V6_9ORYZ5.230e-851.11Cytochrome b-c1 complex subunit 6 n=2 Tax=Oryza Ta... [more]
UPI00201A59365.350e-853.33cytochrome b-c1 complex subunit 6-1, mitochondrial... [more]
A0A0E0MCT3_ORYPU5.730e-851.11Cytochrome b-c1 complex subunit 6 n=1 Tax=Oryza pu... [more]
Q53PN7_ORYSJ6.420e-851.11Ubiquinol--cytochrome-c reductase, putative n=1 Ta... [more]
A0A0E0F2V4_9ORYZ6.860e-851.11UCR_hinge domain-containing protein n=1 Tax=Oryza ... [more]
I1IU50_BRADI9.840e-853.33Cytochrome b-c1 complex subunit 6 n=2 Tax=Brachypo... [more]
C5YS99_SORBI9.840e-851.11Cytochrome b-c1 complex subunit 6 n=5 Tax=Panicoid... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036811Ubiquinol-cytochrome C reductase hinge domain superfamilyGENE3D1.10.287.20coord: 1..43
e-value: 3.5E-11
score: 45.0
IPR036811Ubiquinol-cytochrome C reductase hinge domain superfamilySUPERFAMILY81531Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)coord: 2..43
IPR023184Ubiquinol-cytochrome C reductase hinge domainPFAMPF02320UCR_hingecoord: 3..43
e-value: 4.8E-13
score: 49.1
NoneNo IPR availablePANTHERPTHR15336:SF8coord: 3..43
IPR003422Cytochrome b-c1 complex, subunit 6PANTHERPTHR15336UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 7.8 KDA PROTEINcoord: 3..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig99contigF-serratus_M_contig99:842685..844585 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig99.21202.1mRNA_F-serratus_M_contig99.21202.1Fucus serratus malemRNAF-serratus_M_contig99 841221..844657 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig99.21202.1 ID=prot_F-serratus_M_contig99.21202.1|Name=mRNA_F-serratus_M_contig99.21202.1|organism=Fucus serratus male|type=polypeptide|length=44bp
MSEYKACIDRVEKKGFGTCEPWFFDYLSCVDKCVAPKIMKVLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036811Ubol_cytC_Rdtase_hinge_dom_sf
IPR023184Ubol_cytC_Rdtase_hinge_dom
IPR003422Cyt_b-c1_6