prot_F-serratus_M_contig99.21202.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig99.21202.1
Unique Nameprot_F-serratus_M_contig99.21202.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length44
Homology
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: A0A6H5K2B5_9PHAE (UCR_hinge domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2B5_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 4.560e-22
Identity = 36/43 (83.72%), Postives = 39/43 (90.70%), Query Frame = 0
Query:    1 MSEYKACIDRVEKKGFGTCEPWFFDYLSCVDKCVAPKIMKVLK 43
            MSEYKAC++RV  KGFGTCEPWFFDY+SCVDKC APKIMKV K
Sbjct:   27 MSEYKACVERVISKGFGTCEPWFFDYISCVDKCAAPKIMKVTK 69          
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: D8LEI8_ECTSI (Ubiquinol cytochrome c reductase subunit 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEI8_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 9.210e-22
Identity = 35/43 (81.40%), Postives = 38/43 (88.37%), Query Frame = 0
Query:    1 MSEYKACIDRVEKKGFGTCEPWFFDYLSCVDKCVAPKIMKVLK 43
            MSEYKAC++RV  KGFGTCEPWFFDY+SCVDKC APKIMK  K
Sbjct:   27 MSEYKACVERVTSKGFGTCEPWFFDYISCVDKCAAPKIMKATK 69          
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: A0A5A8DS32_CAFRO (Cytochrome b-c1 complex subunit 6 n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DS32_CAFRO)

HSP 1 Score: 65.5 bits (158), Expect = 4.340e-13
Identity = 24/41 (58.54%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    3 EYKACIDRVEKKGFGTCEPWFFDYLSCVDKCVAPKIMKVLK 43
            +Y+AC+ R+  KG G+CEPW FDY +CVDKC AP++  VLK
Sbjct:   27 KYEACVKRITAKGSGSCEPWAFDYWTCVDKCTAPRLFAVLK 67          
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: F0XZK5_AURAN (UCR_hinge domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZK5_AURAN)

HSP 1 Score: 62.0 bits (149), Expect = 1.020e-11
Identity = 23/40 (57.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    4 YKACIDRVEKKGFGTCEPWFFDYLSCVDKCVAPKIMKVLK 43
            Y +C+DR+E KG G CEP++FD+L C+DKC  P IM+ LK
Sbjct:   28 YLSCVDRIEAKGGGDCEPYYFDWLKCLDKCAMPHIMQKLK 67          
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: UPI001AD910EF (cytochrome b-c1 complex subunit 6-1, mitochondrial-like n=2 Tax=Rosoideae TaxID=171638 RepID=UPI001AD910EF)

HSP 1 Score: 54.3 bits (129), Expect = 1.200e-8
Identity = 23/45 (51.11%), Postives = 31/45 (68.89%), Query Frame = 0
Query:    1 MSEYKACIDRVE--KKGFGTCEPWFFDYLSCVDKCVAPKIMKVLK 43
            + EY+AC+ R+E    G+  C   +FDY+SCVDKCVAPK+   LK
Sbjct:   25 LIEYQACVKRIEGDDSGYKHCTGQYFDYISCVDKCVAPKLFGKLK 69          
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: A0A5J9UT90_9POAL (Cytochrome b-c1 complex subunit 6 n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9UT90_9POAL)

HSP 1 Score: 54.3 bits (129), Expect = 1.450e-8
Identity = 23/45 (51.11%), Postives = 31/45 (68.89%), Query Frame = 0
Query:    1 MSEYKACIDRVEKKGFGT--CEPWFFDYLSCVDKCVAPKIMKVLK 43
            + EY+ C+ R+EK   G   C   +FDY SC+DKCVAPK++K LK
Sbjct:   33 LYEYERCVKRIEKDDTGHKHCTGQYFDYWSCIDKCVAPKLLKQLK 77          
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: A0A6J5VN54_PRUAR (Cytochrome b-c1 complex subunit 6 n=1 Tax=Prunus armeniaca TaxID=36596 RepID=A0A6J5VN54_PRUAR)

HSP 1 Score: 53.9 bits (128), Expect = 2.060e-8
Identity = 24/45 (53.33%), Postives = 30/45 (66.67%), Query Frame = 0
Query:    1 MSEYKACIDRVEKKGFGT--CEPWFFDYLSCVDKCVAPKIMKVLK 43
            + EY+AC+ RVE    G   C   +FDY+SCVDKCVAPK+   LK
Sbjct:   33 LIEYQACVKRVEADNNGDKHCTGQYFDYISCVDKCVAPKLFGALK 77          
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: A0A6P5TDT7_PRUAV (Cytochrome b-c1 complex subunit 6 n=8 Tax=Amygdaloideae TaxID=171637 RepID=A0A6P5TDT7_PRUAV)

HSP 1 Score: 53.5 bits (127), Expect = 2.420e-8
Identity = 24/45 (53.33%), Postives = 30/45 (66.67%), Query Frame = 0
Query:    1 MSEYKACIDRVEKKGFGT--CEPWFFDYLSCVDKCVAPKIMKVLK 43
            + EY+AC+ RVE    G   C   +FDY+SCVDKCVAPK+   LK
Sbjct:   25 LIEYQACVKRVEGDNNGEKHCTGQYFDYISCVDKCVAPKLFGALK 69          
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: A0A2P2JPK4_RHIMU (Cytochrome b-c1 complex subunit 6 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2JPK4_RHIMU)

HSP 1 Score: 53.5 bits (127), Expect = 2.420e-8
Identity = 24/45 (53.33%), Postives = 31/45 (68.89%), Query Frame = 0
Query:    1 MSEYKACIDRVEKKGFGT--CEPWFFDYLSCVDKCVAPKIMKVLK 43
            + EY+ACI R+E    G+  C   +FDYLSCVDKCVAP++   LK
Sbjct:   25 LIEYEACIKRIEGDDTGSKHCTGQYFDYLSCVDKCVAPRLFPKLK 69          
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Match: I1QXY5_ORYGL (Cytochrome b-c1 complex subunit 6 n=6 Tax=BOP clade TaxID=359160 RepID=I1QXY5_ORYGL)

HSP 1 Score: 53.1 bits (126), Expect = 3.440e-8
Identity = 23/45 (51.11%), Postives = 31/45 (68.89%), Query Frame = 0
Query:    1 MSEYKACIDRVEKKGFGT--CEPWFFDYLSCVDKCVAPKIMKVLK 43
            + EY+ C+ RVEK   G   C   +FDY SC+DKCVAPK+++ LK
Sbjct:   25 LYEYEKCVKRVEKDDTGHKHCTGQYFDYWSCIDKCVAPKLLEKLK 69          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig99.21202.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K2B5_9PHAE4.560e-2283.72UCR_hinge domain-containing protein n=1 Tax=Ectoca... [more]
D8LEI8_ECTSI9.210e-2281.40Ubiquinol cytochrome c reductase subunit 6 n=1 Tax... [more]
A0A5A8DS32_CAFRO4.340e-1358.54Cytochrome b-c1 complex subunit 6 n=1 Tax=Cafeteri... [more]
F0XZK5_AURAN1.020e-1157.50UCR_hinge domain-containing protein n=1 Tax=Aureoc... [more]
UPI001AD910EF1.200e-851.11cytochrome b-c1 complex subunit 6-1, mitochondrial... [more]
A0A5J9UT90_9POAL1.450e-851.11Cytochrome b-c1 complex subunit 6 n=1 Tax=Eragrost... [more]
A0A6J5VN54_PRUAR2.060e-853.33Cytochrome b-c1 complex subunit 6 n=1 Tax=Prunus a... [more]
A0A6P5TDT7_PRUAV2.420e-853.33Cytochrome b-c1 complex subunit 6 n=8 Tax=Amygdalo... [more]
A0A2P2JPK4_RHIMU2.420e-853.33Cytochrome b-c1 complex subunit 6 n=1 Tax=Rhizopho... [more]
I1QXY5_ORYGL3.440e-851.11Cytochrome b-c1 complex subunit 6 n=6 Tax=BOP clad... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036811Ubiquinol-cytochrome C reductase hinge domain superfamilyGENE3D1.10.287.20coord: 1..43
e-value: 3.5E-11
score: 45.0
IPR036811Ubiquinol-cytochrome C reductase hinge domain superfamilySUPERFAMILY81531Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)coord: 2..43
IPR023184Ubiquinol-cytochrome C reductase hinge domainPFAMPF02320UCR_hingecoord: 3..43
e-value: 4.8E-13
score: 49.1
NoneNo IPR availablePANTHERPTHR15336:SF8coord: 3..43
IPR003422Cytochrome b-c1 complex, subunit 6PANTHERPTHR15336UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 7.8 KDA PROTEINcoord: 3..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig99contigF-serratus_M_contig99:842685..844585 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig99.21202.1mRNA_F-serratus_M_contig99.21202.1Fucus serratus malemRNAF-serratus_M_contig99 841221..844657 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig99.21202.1 ID=prot_F-serratus_M_contig99.21202.1|Name=mRNA_F-serratus_M_contig99.21202.1|organism=Fucus serratus male|type=polypeptide|length=44bp
MSEYKACIDRVEKKGFGTCEPWFFDYLSCVDKCVAPKIMKVLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036811Ubol_cytC_Rdtase_hinge_dom_sf
IPR023184Ubol_cytC_Rdtase_hinge_dom
IPR003422Cyt_b-c1_6