prot_F-serratus_M_contig99.21174.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig99.21174.1
Unique Name	prot_F-serratus_M_contig99.21174.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	49

Homology

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BLAST of mRNA_F-serratus_M_contig99.21174.1 vs. uniprot
Match: A0A6H5KC39_9PHAE (Aa_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC39_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 5.320e-9
Identity = 31/49 (63.27%), Postives = 38/49 (77.55%), Query Frame = 0

Query:    1 IIVLRHSLYALRGGDVMTAPFGQVAWITIGVLALIVIFVVVLDLFDVAQ 49
            +IV+RHSLYALRG DVM A FGQVAW+T  +LAL+V  +V L+   VAQ
Sbjct:  415 VIVMRHSLYALRGKDVMVAEFGQVAWVTFALLALVVGAMVGLNTVGVAQ 463

[Close]

BLAST of mRNA_F-serratus_M_contig99.21174.1 vs. uniprot
Match: D7FZR9_ECTSI (Transmembrane amino acid transporter protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR9_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 1.860e-8
Identity = 31/49 (63.27%), Postives = 37/49 (75.51%), Query Frame = 0

Query:    1 IIVLRHSLYALRGGDVMTAPFGQVAWITIGVLALIVIFVVVLDLFDVAQ 49
            +IV+RHSLYALRG DVM A FGQVAW+T  +LAL V  +V L+   VAQ
Sbjct:  415 VIVMRHSLYALRGKDVMVAEFGQVAWVTFALLALAVGAMVGLNTVGVAQ 463

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig99.21174.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig99.21174.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KC39_9PHAE	5.320e-9	63.27	Aa_trans domain-containing protein n=1 Tax=Ectocar...	[more]
D7FZR9_ECTSI	1.860e-8	63.27	Transmembrane amino acid transporter protein n=1 T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..23
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 46..49
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 24..45
None	No IPR available	TMHMM	TMhelix		coord: 20..42

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig99	contig	F-serratus_M_contig99:64327..64473 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig99.21174.1	mRNA_F-serratus_M_contig99.21174.1	Fucus serratus male	mRNA	F-serratus_M_contig99 64327..64473 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig99.21174.1 ID=prot_F-serratus_M_contig99.21174.1|Name=mRNA_F-serratus_M_contig99.21174.1|organism=Fucus serratus male|type=polypeptide|length=49bp
IIVLRHSLYALRGGDVMTAPFGQVAWITIGVLALIVIFVVVLDLFDVAQ