prot_F-serratus_M_contig972.21055.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig972.21055.1
Unique Nameprot_F-serratus_M_contig972.21055.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length210
Homology
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A6H5JNU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNU8_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 7.330e-19
Identity = 57/179 (31.84%), Postives = 92/179 (51.40%), Query Frame = 0
Query:   31 VKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATNIPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRAGCGLCMEVYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQVQEFMEP 209
            V +K++G+  +Y  C   R+ +   LK+ Q  + E +A  + ++   ++P       L  +++  + ++ E     P+RE VG LMW AT T PDI  AVRA    C      + ++A L +    S    +   G ++W SR Q+     T  AEY  +++V+NEVLFLRQ+  FM P
Sbjct:    2 VPVKNLGELRWYSACFYERDVERGLLKISQQRFAEELAAEYGIEWGRSVP-------LPVSMKLTDFDDNEVCADVPFRELVGPLMWWATQTRPDIVNAVRAVARYCASPKM-VHWKAALGILGRASD---VWVCGCVTWFSRTQKCVTLSTTEAEYVAIADVLNEVLFLRQLWRFMLP 169          
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A250XPW1_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XPW1_9CHLO)

HSP 1 Score: 94.0 bits (232), Expect = 1.140e-18
Identity = 66/217 (30.41%), Postives = 107/217 (49.31%), Query Frame = 0
Query:    3 LAVYVDD-ILAHAKDQATMDRFATG--LGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDV--KKATNIPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACA-----------VRAGCGLCMEVYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQV 203
            L VYVDD +L  +KD  +   +     L     + DMG+A +++G  I RNR+ R L L Q  + E +  ++ +   K  ++P       +S A++ +   E  +   + Y E +G+L++ +  T PDIA A           V     + M  Y D D+   +D RR+ +G V  +  GAISW SR+Q   A  +  AEY + +  V E L+LR++
Sbjct:  497 LLVYVDDCLLITSKDNKSSLLYLRSQLLASIFDIHDMGEAKFFLGMEIERNREKRTLVLSQRRFNEELLNKYGMIESKGKSVP-------MSTALKLQRDGEALDTEHYRYSEIIGSLLYLSVCTRPDIAFAHTVHTAREMGIVYGSKKMDMVGYCDADYAGDMDTRRSTTGYVFSMHGGAISWSSRLQPTVAMSSCEAEYMSAASAVKEALWLRKL 706          
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A8H6Z624_9AGAR (Transcription factor n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H6Z624_9AGAR)

HSP 1 Score: 94.0 bits (232), Expect = 1.280e-18
Identity = 63/215 (29.30%), Postives = 104/215 (48.37%), Query Frame = 0
Query:    1 MVLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVK--KATNIPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVR-----------AGCGLCMEVYTDLDFRACLDMRR-TVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLR 201
            ++++V+VDD    A +   ++    G+ + V++ D+G+  + +G  + RNR  R L L Q  Y+  I +R+++   K  +IP    +  LS +  P   EE   MR  PY+E VG++M+ +  T PDI   V            A       V   L+  A L++     SG   ++  GA+SW+S+ QE+    T  AEY   +    E L+LR
Sbjct: 1464 VIVSVHVDDCTIAASNMTLINEVKAGIAKYVEIVDLGEIHWLLGIKVKRNRAERTLSLSQKAYITSIVRRYNLDDLKPYSIPMDPNL-HLSSSQSPHTAEELAVMRSVPYKEAVGSVMYASLATRPDITFVVTKLSKFSVNPGSAHWDAAKRVICYLNGTADLELTYGETSGFAYLIDGGAVSWNSKQQELVVLSTTEAEYVAATHASKEGLWLR 1677          
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A5D3DQQ2_CUCME (Gag/pol protein n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5D3DQQ2_CUCME)

HSP 1 Score: 87.4 bits (215), Expect = 5.000e-17
Identity = 62/185 (33.51%), Postives = 89/185 (48.11%), Query Frame = 0
Query:    3 LAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATN--IPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRAGCGLCMEVYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTA 185
            L +YVDDIL    D   +      L  + ++KD+G+A + +G  I R+RK + L L Q  Y+  I  ++ ++ +    +P   GV TLSK    + P+E EEMR  PY   VG+LM             V     L +  YTD DF+A  D R++  G+V  L  GA+ W S  Q      T  A
Sbjct:  105 LVLYVDDILLIGTDVGLLTYIKQCLAAQFQMKDLGEAQFVLGVQIFRDRKNKMLALSQASYINKIVVKYSMQNSKRGLLPFRHGV-TLSKKKCLKTPQEVEEMRHIPYASAVGSLMDYML---------VYGSKDLILIGYTDSDFQADRDSRKSTLGSVFTLNGGAVVWRSIKQGCIVDSTMEA 279          
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A250XC13_9CHLO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XC13_9CHLO)

HSP 1 Score: 89.0 bits (219), Expect = 5.360e-17
Identity = 68/239 (28.45%), Postives = 111/239 (46.44%), Query Frame = 0
Query:    3 LAVYVDD-ILAHAKD-QATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDV--KKATNIPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRAGCG-------------------LC---------------MEVYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQV 203
            L VYVDD +L  +KD ++++    + L     + DMG+A +++G  I RNR+ R L L Q  + E +  ++ +   K  ++P       +S A++ +   E  +   + Y E +G+L++ +  T PDIA AV A                      LC               M  Y D D+   +D RR+ +G V  +  GAISW SR+Q   A  +   EY + +  V E L+LR++
Sbjct:  212 LLVYVDDCLLITSKDNKSSLLNLKSQLASIFDIHDMGEAKFFLGMEIERNREKRTLVLSQRRFTEELLNKYSMIESKGKSVP-------MSTALKLQRDGEALDTEHYRYSEIIGSLLYLSVCTRPDIAYAVGALARYTQHPTKQHWQTTMALLKYLCSTREMGIVYGSKKMDMVGYCDADYAGDMDTRRSTTGYVFSMHGGAISWSSRLQPTVAMSSCEVEYMSAASAVKEALWLRKL 443          
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A0A9Z147_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Z147_LYGHE)

HSP 1 Score: 87.4 bits (215), Expect = 1.030e-16
Identity = 43/133 (32.33%), Postives = 79/133 (59.40%), Query Frame = 0
Query:    1 MVLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATNIPAA-AGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRA 132
            +++AV+VDD+L  + D+    +    L +  K+ D+G+A   +G  +TR+R+A+ + + Q  Y+E + KRF +  A  +    +     SK   P+  +E+E MRK PY+E +G+L++ A ++ PDIA A+ +
Sbjct:   55 LIVAVWVDDLLIFSNDRKLKKQVKLRLTRSFKMTDLGEAKSVLGFQLTRDRQAKRIWISQQHYIEEMLKRFHMDAANPVTTPMSNSEKFSKNQAPQTADERERMRKIPYQEAIGSLLFAAQVSRPDIAFAISS 187          
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A250XQR1_9CHLO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XQR1_9CHLO)

HSP 1 Score: 87.0 bits (214), Expect = 1.300e-16
Identity = 68/236 (28.81%), Postives = 107/236 (45.34%), Query Frame = 0
Query:    3 LAVYVDD-ILAHAKD-QATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDV--KKATNIPAAAGVPTLSKAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRAGCG-------------------LC---------------MEVYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFL 200
            L VYVDD +L  +KD ++++    + L     + DMG+A +++G  I RNR+ R L L Q  + E +  ++ +   K  ++P       +S A++ +   E  +   + Y E +G+L++ +  T PDIA AV A                      LC               M  Y D D+   +D RR+  G V  +  GAISW SR+Q   A  +  AEY   +  V E L+L
Sbjct:   40 LLVYVDDCLLITSKDNKSSLLNLKSQLASIFDIHDMGEAKFFLGMEIERNREKRTLVLSQRRFTEELLNKYSMIESKGKSVP-------MSTALKLQRDGEALDTEHYRYSEIIGSLLYLSVCTRPDIAYAVGALARYTQHPTKQHWQTTMALLKYLCSTREMGIVYGSKKMDMVRYCDADYAGDMDTRRSTKGYVFSMQGGAISWSSRLQPTVAMSSCEAEYMLAASAVKEALWL 268          
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A8HNP6_CHLRE (Reverse transcriptase, gag-pol polyprotein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8HNP6_CHLRE)

HSP 1 Score: 87.4 bits (215), Expect = 1.560e-16
Identity = 55/201 (27.36%), Postives = 93/201 (46.27%), Query Frame = 0
Query:    5 VYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATNIPAAAGVPTLS--KAVEPRNPEEKEEMRKFPYRETVGALMWTATMTWPDIACAVRAGCGLCMEVYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQV 203
            V+VDD+L   + +  +  F    G++  +KD+G+A YY+G  I R+R AR +KL Q  Y   + ++F +    ++ A    P L   K +   N     +  K   R   G        +   +  +  A  G  +  Y D D+  CLD RR+ +  V+     A +W S++Q   A+ T  AEY   +    E+L+ R++
Sbjct:  179 VHVDDMLVAGRSKLQLASFKVAFGKRFAIKDLGEARYYLGMDIVRDRAARTIKLSQRQYTADVLEQFGM----DLSAPVSTPMLEGEKLLRASNTTAHLQAAKRVLRYLKGTATLGLVYSGEGLVLSGDARYGEFVLGYADADYAGCLDTRRSTTAYVVQANGTATAWQSKLQPTVAASTTEAEYMAAASAAREMLWQRKL 375          
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A6G0WQQ1_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WQQ1_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 2.040e-16
Identity = 66/208 (31.73%), Postives = 102/208 (49.04%), Query Frame = 0
Query:    2 VLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATNIPAAAGVPTLSKAVE-PRNPEEKEEM------RKFPYRETVGALMWTA-TMTWPDIACAVRAGCGLCMEVYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLR 201
            ++A+YVDD++  A++   M    + + Q+   KDMG   Y +G  I R+RK R + + Q      + KRF + +A   PA   +  + KA + P   + K E       RK  + E    + + A TM+       +  G  L M  YTD D+ A  D RR+VSG    + K  +SW S+ Q + A  T  AEY  L++   EVLF++
Sbjct:  343 IIAIYVDDLVLVAQNDHVMADLKSAIKQRFASKDMGPIHYILGLKIIRDRKKRLIHISQPLNALNMLKRFQLDRAR--PAMIPLNEVLKASDSPTEDQSKSEAYAAMHARKKHFGEMKRIMRYVAGTMSHG----LLYRGSELDMCGYTDSDYAANPDNRRSVSGYCTFVGKCLVSWASQTQGIVAQSTTEAEYIALAQAAKEVLFMK 544          
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 3.980e-16
Identity = 63/244 (25.82%), Postives = 118/244 (48.36%), Query Frame = 0
Query:    2 VLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRNRKARELKLDQHFYMEPIAKRFDVKKATNIPAA-------------AGV------------------PTLSKAVEP--RNPEEKEEMRKFPYRETVGALMWTATMTW---PDIACAVRAGCGLCMEVYTDLDFRACLDMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFLRQVQEFMEP 209
            ++A++VDDIL +A  ++  +     LG  +  K++G+  +++GC   R+R+A  +++ Q  Y+  + +RF+V + ++IPA+             AG                   P +S AV    R+  E ++      ++ +  L+ TA +T    PD +            VY D DF +  + RR+VSGA++++A   + W S+ Q+  +  T  AEY  + + V E LF+  + +F+ P
Sbjct:  640 MVAIHVDDIL-YAGTKSLAEVVVAALGDSLPTKNLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPASPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDAST------LVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRP 876          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig972.21055.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNU8_9PHAE7.330e-1931.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A250XPW1_9CHLO1.140e-1830.41Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A8H6Z624_9AGAR1.280e-1829.30Transcription factor n=1 Tax=Mycena sanguinolenta ... [more]
A0A5D3DQQ2_CUCME5.000e-1733.51Gag/pol protein n=1 Tax=Cucumis melo var. makuwa T... [more]
A0A250XC13_9CHLO5.360e-1728.45Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0A9Z147_LYGHE1.030e-1632.33Retrovirus-related Pol polyprotein from transposon... [more]
A0A250XQR1_9CHLO1.300e-1628.81Reverse transcriptase Ty1/copia-type domain-contai... [more]
A8HNP6_CHLRE1.560e-1627.36Reverse transcriptase, gag-pol polyprotein n=1 Tax... [more]
A0A6G0WQQ1_9STRA2.040e-1631.73Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KKK1_9PHAE3.980e-1625.82Integrase catalytic domain-containing protein n=2 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..77
e-value: 3.6E-10
score: 39.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig972contigF-serratus_M_contig972:213727..214464 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig972.21055.1mRNA_F-serratus_M_contig972.21055.1Fucus serratus malemRNAF-serratus_M_contig972 213256..214683 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig972.21055.1 ID=prot_F-serratus_M_contig972.21055.1|Name=mRNA_F-serratus_M_contig972.21055.1|organism=Fucus serratus male|type=polypeptide|length=210bp
MVLAVYVDDILAHAKDQATMDRFATGLGQKVKLKDMGDAGYYMGCHITRN
RKARELKLDQHFYMEPIAKRFDVKKATNIPAAAGVPTLSKAVEPRNPEEK
EEMRKFPYRETVGALMWTATMTWPDIACAVRAGCGLCMEVYTDLDFRACL
DMRRTVSGAVLILAKGAISWDSRMQEVTASGTPTAEYATLSEVVNEVLFL
RQVQEFMEP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2