prot_F-serratus_M_contig97.21040.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig97.21040.1
Unique Nameprot_F-serratus_M_contig97.21040.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length341
Homology
BLAST of mRNA_F-serratus_M_contig97.21040.1 vs. uniprot
Match: A0A6H5J4N2_9PHAE (Integrase catalytic domain-containing protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4N2_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 8.040e-74
Identity = 144/342 (42.11%), Postives = 203/342 (59.36%), Query Frame = 0
Query:    1 VRRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDDEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEDKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGAYLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVLEDNGGAIKLATNKHASRRTKHIDVKHHLVRDASNRK 341
            + +L K++YGL QA R W+      + A+GFEQ  AD CVFR + D    +++VVHVDDI A   ++   D+F A+L +   +K++G+  +Y GC   RN++T  L   Q  + + +   + V     VP +SGV  LS  D  +   E      FP+RE VG+LMW AT TRPDIA AVRAVAR+C +P   H  A M I  Y   T  +GI++  G   G  ++ Y D+DF +    RRSVSG ++    GA+SW SR Q+     T+EAEYVAL + VK++LFLRQ+  FM P + +  + V EDN GAI+LA N  ++  +KHIDV+HH +R+   RK
Sbjct: 1428 IVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFDADEVATE------FPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERK 1761          
BLAST of mRNA_F-serratus_M_contig97.21040.1 vs. uniprot
Match: A0A6H5L867_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L867_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 8.050e-74
Identity = 144/342 (42.11%), Postives = 203/342 (59.36%), Query Frame = 0
Query:    1 VRRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDDEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEDKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGAYLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVLEDNGGAIKLATNKHASRRTKHIDVKHHLVRDASNRK 341
            + +L K++YGL QA R W+      + A+GFEQ  AD CVFR + D    +++VVHVDDI A   ++   D+F A+L +   +K++G+  +Y GC   RN++T  L   Q  + + +   + V     VP +SGV  LS  D  +   E      FP+RE VG+LMW AT TRPDIA AVRAVAR+C +P   H  A M I  Y   T  +GI++  G   G  ++ Y D+DF +    RRSVSG ++    GA+SW SR Q+     T+EAEYVAL + VK++LFLRQ+  FM P + +  + V EDN GAI+LA N  ++  +KHIDV+HH +R+   RK
Sbjct: 1214 IVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFDADEVATE------FPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERK 1547          
BLAST of mRNA_F-serratus_M_contig97.21040.1 vs. uniprot
Match: A0A6H5KBD4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD4_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 8.510e-74
Identity = 144/342 (42.11%), Postives = 203/342 (59.36%), Query Frame = 0
Query:    1 VRRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDDEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEDKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGAYLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVLEDNGGAIKLATNKHASRRTKHIDVKHHLVRDASNRK 341
            + +L K++YGL QA R W+      + A+GFEQ  AD CVFR + D    +++VVHVDDI A   ++   D+F A+L +   +K++G+  +Y GC   RN++T  L   Q  + + +   + V     VP +SGV  LS  D  +   E      FP+RE VG+LMW AT TRPDIA AVRAVAR+C +P   H  A M I  Y   T  +GI++  G   G  ++ Y D+DF +    RRSVSG ++    GA+SW SR Q+     T+EAEYVAL + VK++LFLRQ+  FM P + +  + V EDN GAI+LA N  ++  +KHIDV+HH +R+   RK
Sbjct: 1282 IVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFDADEVATE------FPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERK 1615          
BLAST of mRNA_F-serratus_M_contig97.21040.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 1.080e-73
Identity = 140/335 (41.79%), Postives = 200/335 (59.70%), Query Frame = 0
Query:    1 VRRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDDEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEDKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGAYLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVLEDNGGAIKLATNKHASRRTKHIDVKHHLVR 335
            + +  +AIYGL Q+GR W     D +   GFEQ KADPCVFRK+VD    M++V++VDDIL    D+   +   A L +KF  K++G+ +++ GC I R+ +   L+  Q  Y++SM++RFDVK   ++PA  G     K        E EE   +P REA+G++MW +T +RPD++ AVRAVAR    P   H  A+ KI  YL  T+D GITY  +G GL +  Y D+ + A  + RRSVSG    +    +S  S+ Q + +  ++EAEY+A  E VK+ LF+R V  F+ P     ++ VLEDN GAI L  N  +S RTKHIDV++H +R
Sbjct: 1277 IAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR-------EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIR 1601          
BLAST of mRNA_F-serratus_M_contig97.21040.1 vs. uniprot
Match: A0A6H5JG40_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG40_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 1.370e-73
Identity = 143/342 (41.81%), Postives = 202/342 (59.06%), Query Frame = 0
Query:    1 VRRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDDEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEDKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGAYLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVLEDNGGAIKLATNKHASRRTKHIDVKHHLVRDASNRK 341
            + +L K++YGL QA R W+      + A+GFEQ  AD CVFR + D    +++VVHVDDI A   ++   D+F A+L +   +K++G+  +Y GC   RN++T  L   Q  + + +   + V     VP +SGV  LS  D        E    FP+RE VG+LMW AT TRPDIA AVRAVAR+C +P   H  A M I  Y   T  +GI++  G   G  ++ Y D+DF +    RRSVSG ++    GA+SW SR Q+     T+EAEYVAL + VK++LFLRQ+  FM P + +  + + EDN GAI+LA N  ++  +KHIDV+HH +R+   RK
Sbjct:  922 IVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFDA------DEVATDFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERK 1255          
BLAST of mRNA_F-serratus_M_contig97.21040.1 vs. uniprot
Match: A0A6A3Q908_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Q908_9STRA)

HSP 1 Score: 247 bits (631), Expect = 1.450e-73
Identity = 143/338 (42.31%), Postives = 209/338 (61.83%), Query Frame = 0
Query:    1 VRRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDDEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVK--KEDKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGAYLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVLEDNGGAIKLATNKHASRRTKHIDVKHHLVRD 336
            V  L +++YGL QA R WN      + + GFE A ADPCV+ +  + E E +V ++VDD+L  ++ KA +    A + +KF++KD+G A + +G  I  + + R L   Q  Y ES+IK+F  +  K    P   GV  L+KADEPQ+ E+K +MK  PYR  VG+LM+ A  TRPDI+ AV  ++RF ENPG  H  A +K+ +YLL TKD GI Y G   G   EAY+D+D+    D RRSVSG +LML    + W S  Q+  A  ++EAEY+AL++ VK+ +++R++ + +    +VGA  + EDN GA+ LA N     RTKHID+++H +R+
Sbjct:  215 VCMLLQSLYGLKQASRVWNETIDKHLKSTGFEPADADPCVYTRG-EGEGECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFIVGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQPEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKEIGAE-QVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIRE 548          
BLAST of mRNA_F-serratus_M_contig97.21040.1 vs. uniprot
Match: A0A6A3Q8N8_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=6 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3Q8N8_9STRA)

HSP 1 Score: 248 bits (633), Expect = 1.500e-73
Identity = 141/338 (41.72%), Postives = 210/338 (62.13%), Query Frame = 0
Query:    1 VRRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDDEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVK--KEDKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGAYLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVLEDNGGAIKLATNKHASRRTKHIDVKHHLVRD 336
            V  L +++YGL  A R WN+     + ++GFE A ADPCV+ +  + E E +V ++VD++L  ++ KA +    A + +KF++KD+G A + +G  I  N + R L   Q  Y ES+IK F  +  K    P   GV  L+KADEPQ+ E+K +MK  PYR  VG+LM+ A  TRPD++ AV  ++RF ENPG  H  + +K  +YLL TKD GI Y GQ  G  +EAY+D+D+    D RRSVSG +LML    + W S  Q+  A  ++EAEY+AL++ VK+ +++R++ + +    +VGA  + EDN GA+ LA N     RTKHID+++H +R+
Sbjct:  248 VCMLLQSLYGLKHASRVWNDTIDKHLKSMGFEPADADPCVYTRG-EGEDECIVCLYVDNMLIASRQKAVITSVKAGIAEKFRIKDLGRARFILGIEIDYNMERRTLGISQKAYTESIIKTFGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSVVGSLMYLACGTRPDVSVAVAKLSRFLENPGEKHWDSGIKAVRYLLKTKDVGIVYDGQ-LGTHLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAE-QVGATEIYEDNQGAMALAKNVGYQARTKHIDIRYHFIRE 581          
BLAST of mRNA_F-serratus_M_contig97.21040.1 vs. uniprot
Match: A0A6A3L5P5_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=20 Tax=Phytophthora TaxID=4783 RepID=A0A6A3L5P5_9STRA)

HSP 1 Score: 242 bits (618), Expect = 2.360e-73
Identity = 140/336 (41.67%), Postives = 208/336 (61.90%), Query Frame = 0
Query:    1 VRRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDDEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVK--KEDKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGAYLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVLEDNGGAIKLATNKHASRRTKHIDVKHHLV 334
            V  L +++YGL QA R WN      + ++GFE A ADPCV+ +  + E E +V ++VDD+L  ++ KA +    A + +KF++KD+G A + +G  I  + + R L   Q  Y ES+IK+F  +  K    P   GV  L+K DEPQ+ E+ ++MK  PYR  VG+LM+ A  TRPDI+ AV  ++RF ENPG  H  A +K+ +YLL TKD GI Y G   G  +EAY+D+D+    D RRSVSG +LML    + W S  Q+  A  ++EAEY+AL++ VK+ +++R++ + +    +VGA  + EDN GA+ LA N     RTKHID+++H +
Sbjct:   54 VCTLPQSLYGLKQASRVWNETIDKRLKSMGFEPADADPCVYTRG-EGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFILGIEIDYDMERRTLGIIQKAYTESIIKKFGQENAKPCLAPLEPGV-QLTKGDEPQTEEDIDKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAE-QVGATVIYEDNQGAMTLAKNVGYQARTKHIDIRYHFI 385          
BLAST of mRNA_F-serratus_M_contig97.21040.1 vs. uniprot
Match: A0A6A3HAR6_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=21 Tax=Phytophthora TaxID=4783 RepID=A0A6A3HAR6_9STRA)

HSP 1 Score: 241 bits (615), Expect = 6.630e-73
Identity = 140/338 (41.42%), Postives = 208/338 (61.54%), Query Frame = 0
Query:    1 VRRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDDEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVK--KEDKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGAYLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVLEDNGGAIKLATNKHASRRTKHIDVKHHLVRD 336
            V  L +++YGL Q  R WN      + ++GFE A ADPCV+ +  + E E +V ++VDD+L  ++ KA +    A + +KF++KD G A + +   I  + + R L   Q  Y ES+IK+F  +  K    P   GV  L+K+DEPQ+ E+K +MK  PYR  VG+LM+ A  TRPDI+ AV  ++RF ENPG  H  A +K+ +YLL TKD GI Y G   G  +EAY+D+D+    D RRSVSG +LML    + W S  Q+  A  ++EAEY+AL++ VK+ +++R++ + +    +VGA  + EDN GA+ LA N     RTKHID+++H +R+
Sbjct:   54 VCMLLQSLYGLKQTSRVWNETIDKHLKSVGFEPADADPCVYTRG-EGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDTGRARFILSIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKSDEPQTEEDKAKMKSRPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWVGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALISTEAEYMALSDCVKECVWMRRLLKDIGAE-QVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIRE 387          
BLAST of mRNA_F-serratus_M_contig97.21040.1 vs. uniprot
Match: A0A6A3GUH8_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=6 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GUH8_9STRA)

HSP 1 Score: 244 bits (624), Expect = 1.150e-72
Identity = 141/338 (41.72%), Postives = 209/338 (61.83%), Query Frame = 0
Query:    1 VRRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDDEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVK--KEDKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGAYLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVLEDNGGAIKLATNKHASRRTKHIDVKHHLVRD 336
            V  L +++YGL QA R WN      + ++GFE A ADPCV+ +  + E E +V ++VDD+L  ++ KA +    A + +KF+ KD+G A + +G  I  + + R L   Q  Y ES+IK+F  +  K    P   GV   +KADEPQ+ E+K +MK  PYR  VG+LM+ A  TRP+I+ AV  ++RF ENPG  H  A +K+ +YLL TKD GI Y G   G  +EAY+D+D+    D RRSVSG +LML    + W S  Q+  A  ++EAEY+AL++ VK+ +++R++ + +    +VGA  + EDN GA+ LA N     RTKHID+++H +R+
Sbjct:  201 VGMLLQSLYGLKQASRDWNETIDKHLKSMGFEPADADPCVYTRG-EGEVECIVCLYVDDMLIASRQKAAIASVKAGIAEKFRRKDLGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QFTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPEISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWADNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECIWMRRLLKDIGAE-KVGATVIYEDNQGAMGLAKNVGYQARTKHIDIRYHFIRE 534          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig97.21040.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J4N2_9PHAE8.040e-7442.11Integrase catalytic domain-containing protein n=18... [more]
A0A6H5L867_9PHAE8.050e-7442.11Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KBD4_9PHAE8.510e-7442.11Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JN00_9PHAE1.080e-7341.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JG40_9PHAE1.370e-7341.81Integrase catalytic domain-containing protein n=3 ... [more]
A0A6A3Q908_9STRA1.450e-7342.31Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A3Q8N8_9STRA1.500e-7341.72Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A3L5P5_9STRA2.360e-7341.67Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A3HAR6_9STRA6.630e-7341.42Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A3GUH8_9STRA1.150e-7241.72Retrovirus-related Pol polyprotein from transposon... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..126
e-value: 8.2E-24
score: 84.6
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 156..337
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 7..329
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 156..337

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig97contigF-serratus_M_contig97:864216..865238 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig97.21040.1mRNA_F-serratus_M_contig97.21040.1Fucus serratus malemRNAF-serratus_M_contig97 864216..865238 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig97.21040.1 ID=prot_F-serratus_M_contig97.21040.1|Name=mRNA_F-serratus_M_contig97.21040.1|organism=Fucus serratus male|type=polypeptide|length=341bp
VRRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDDEAE
MVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRN
RKTRELKFDQHLYVESMIKRFDVKKEDKVPAASGVPTLSKADEPQSPEEK
EEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMK
IFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGAYLDTRRSVSGAVLMLA
KGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVG
AVNVLEDNGGAIKLATNKHASRRTKHIDVKHHLVRDASNRK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like