mRNA_F-serratus_M_contig97.21040.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig97.21040.1
Unique NamemRNA_F-serratus_M_contig97.21040.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig97.21040.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 1.340e-79
Identity = 143/342 (41.81%), Postives = 206/342 (60.23%), Query Frame = 1
Query:    1 VRRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDDEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEDKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGAYLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVLEDNGGAIKLATNKHASRRTKHIDVKHHLVRDASNRK 1023
            + +LNK++YGL QA R W++     +  +GF Q  AD CVFR + +    + +VVHVDDI +  +++   D+F  +L     +K++GD  +Y GC   R+     LK  Q  Y E +   F V+   ++P   G+  LS+ D+       EE+  +P+RE +G+LMW AT TRPDIA AVRAVAR+C +P   H +A + I  Y++ T D GIT+  G   GL ME + D+D+ +    RRSVSG ++M   G ISW SR Q+     T+EAEYV+LA+ +K+VLFLRQV  FM P   +  + V EDN GAI+LA N  ++  +KHIDV+HH +R+   RK
Sbjct:   68 IVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFDQ------DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRK 401          
BLAST of mRNA_F-serratus_M_contig97.21040.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 3.680e-79
Identity = 144/342 (42.11%), Postives = 203/342 (59.36%), Query Frame = 1
Query:    1 VRRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDDEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEDKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGAYLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVLEDNGGAIKLATNKHASRRTKHIDVKHHLVRDASNRK 1023
            + +L K++YGL QA R W+      + A+GFEQ  AD CVFR + D    +++VVHVDDI A   ++   D+F A+L +   +K++G+  +Y GC   RN++T  L   Q  + + +   + V     VP +SGV  LS  D  +   E      FP+RE VG+LMW AT TRPDIA AVRAVAR+C +P   H  A M I  Y   T  +GI++  G   G  ++ Y D+DF +    RRSVSG ++    GA+SW SR Q+     T+EAEYVAL + VK++LFLRQ+  FM P + +  + V EDN GAI+LA N  ++  +KHIDV+HH +R+   RK
Sbjct:   92 IVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFDADEVATE------FPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERK 425          
BLAST of mRNA_F-serratus_M_contig97.21040.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 1.080e-77
Identity = 143/342 (41.81%), Postives = 206/342 (60.23%), Query Frame = 1
Query:    1 VRRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDDEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEDKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGAYLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVLEDNGGAIKLATNKHASRRTKHIDVKHHLVRDASNRK 1023
            + +LNK++YGL QA R W++     +  +GF Q  AD CVFR + +    + +VVHVDDI +  +++   D+F  +L     +K++GD  +Y GC   R+     LK  Q  Y E +   F V+   ++P   G+  LS+ D+       EE+  +P+RE +G+LMW AT TRPDIA AVRAVAR+C +P   H +A + I  Y++ T D GIT+  G   GL ME + D+D+ +    RRSVSG ++M   G ISW SR Q+     T+EAEYV+LA+ +K+VLFLRQV  FM P   +  + V EDN GAI+LA N  ++  +KHIDV+HH +R+   RK
Sbjct:  242 IVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFDQ------DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRK 575          
BLAST of mRNA_F-serratus_M_contig97.21040.1 vs. uniprot
Match: A0A6G0MK94_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=A0A6G0MK94_9STRA)

HSP 1 Score: 248 bits (633), Expect = 1.360e-75
Identity = 142/338 (42.01%), Postives = 212/338 (62.72%), Query Frame = 1
Query:    1 VRRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDDEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVK--KEDKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGAYLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVLEDNGGAIKLATNKHASRRTKHIDVKHHLVRD 1008
            V  L +++YGL QA R WN      + ++GFE A ADPCV+ +  + E E +V ++VDD+L  ++ KA +    A + +KF++KD+G A + +G  I  + + R L   Q  Y ES+IK+F  +  K    P   GV  L+KADEPQ+ E+K +MK  PYR  VG+LM+ A  TRPDI+ AV  ++RF ENPG  H  A +K+ +YLL TKD GI Y G   G  +EAY+D+++    D RRSVSG +LML    + W S  Q+  A  ++EAEY+AL++ VK+ +++R++ + +    +VGA+ + EDN GA+ LA N     RTKHID+++H +R+
Sbjct:   54 VCMLLQSLYGLKQASRVWNETIDKHLKSMGFEPADADPCVYTRG-EGEGECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPWLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDANWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAE-QVGAMVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIRE 387          
BLAST of mRNA_F-serratus_M_contig97.21040.1 vs. uniprot
Match: A0A6A3VCN8_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3VCN8_9STRA)

HSP 1 Score: 245 bits (626), Expect = 3.210e-75
Identity = 142/335 (42.39%), Postives = 209/335 (62.39%), Query Frame = 1
Query:   10 LNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDDEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVK--KEDKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGAYLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVLEDNGGAIKLATNKHASRRTKHIDVKHHLVRD 1008
            L +++YGL QA R WN      + ++GFE A ADPCV+ +  + E E +V ++VDD+L  ++ KA +    A + +KF++KDMG A + +   I  + + R L   Q  Y ES+IK+F  +  K    P   GV  L+KADEPQ+ E+K +MK  PYR  VG+LM+ A  TRPDI+ AV  ++RF ENPG  H  A +K+ +YLL TKD GI Y G   G  +EAY+D+D+    D RRSVSG +LML    + W S  Q+  A  ++EAEY+AL++ VK+ +++R++ + +    +VGA  + EDN GA+ LA N     RTKHID+++H +R+
Sbjct:    2 LLQSLYGLKQASRVWNETIDKHLKSMGFEPADADPCVYTRG-EGEDECIVRLYVDDMLIASRQKAVIASEKAGIAEKFRIKDMGRARFILSIEIDYDIERRTLGISQKAYTESIIKKFGQENTKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAE-QVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIRE 332          
BLAST of mRNA_F-serratus_M_contig97.21040.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 1.850e-74
Identity = 143/342 (41.81%), Postives = 206/342 (60.23%), Query Frame = 1
Query:    1 VRRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDDEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEDKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGAYLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVLEDNGGAIKLATNKHASRRTKHIDVKHHLVRDASNRK 1023
            + +LNK++YGL QA R W++     +  +GF Q  AD CVFR + +    + +VVHVDDI +  +++   D+F  +L     +K++GD  +Y GC   R+     LK  Q  Y E +   F V+   ++P   G+  LS+ D+       EE+  +P+RE +G+LMW AT TRPDIA AVRAVAR+C +P   H +A + I  Y++ T D GIT+  G   GL ME + D+D+ +    RRSVSG ++M   G ISW SR Q+     T+EAEYV+LA+ +K+VLFLRQV  FM P   +  + V EDN GAI+LA N  ++  +KHIDV+HH +R+   RK
Sbjct:  763 IVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFDQ------DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRK 1096          
BLAST of mRNA_F-serratus_M_contig97.21040.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 3.340e-74
Identity = 140/335 (41.79%), Postives = 201/335 (60.00%), Query Frame = 1
Query:    1 VRRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDDEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEDKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGAYLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVLEDNGGAIKLATNKHASRRTKHIDVKHHLVR 1005
            + +  +AIYGL Q+GR W     D +   GFEQ KADPCVFRK+VD+   M++V++VDDIL    D+   +   A L +KF  K++G+ +++ GC I R+ +   L+  Q  Y++SM++RFDVK   ++PA  G     K        E EE   +P REA+G++MW +T +RPD++ AVRAVAR    P   H  A+ KI  YL  T+D GITY  +G GL +  Y D+ + A  + RRSVSG    +    +S  S+ Q + +  ++EAEY+A  E VK+ LF+R V  F+ P     ++ VLEDN GAI L  N  +S RTKHIDV++H +R
Sbjct:  878 IAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR-------EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIR 1202          
BLAST of mRNA_F-serratus_M_contig97.21040.1 vs. uniprot
Match: A0A6A4F359_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4F359_9STRA)

HSP 1 Score: 243 bits (621), Expect = 3.580e-74
Identity = 142/338 (42.01%), Postives = 207/338 (61.24%), Query Frame = 1
Query:    1 VRRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDDEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVK--KEDKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGAYLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVLEDNGGAIKLATNKHASRRTKHIDVKHHLVRD 1008
            V  L +++YGL QA R WN      + ++GFE A ADPCV+ +  + E E +V ++VDD+L  ++ KA +    A + +KF++KDMG A + +G  I  + + R L   Q  Y ES+IK+F  +  K    P   GV  L+KADEPQ  E+K +MK  PYR  VG+LM+ A  TRPDI+ AV  ++RF ENPG  H  A +K+ +YLL TKD GI Y G   G  +EAY+D+D+    D RRSVSG +LM+    + W S  Q+  A  ++EAEY+AL++ VK+ +++R++   +    +VGA    EDN GA+ LA N      TKHID+++H +R+
Sbjct:   23 VCMLLQSLYGLKQASRVWNETIDKHIKSMGFEPADADPCVYTRG-EGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQIEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLMMCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLNDIGAE-QVGATVRYEDNQGAMALAKNVGYQAHTKHIDIRYHFIRE 356          
BLAST of mRNA_F-serratus_M_contig97.21040.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 5.770e-74
Identity = 140/335 (41.79%), Postives = 201/335 (60.00%), Query Frame = 1
Query:    1 VRRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDDEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEDKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGAYLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVLEDNGGAIKLATNKHASRRTKHIDVKHHLVR 1005
            + +  +AIYGL Q+GR W     D +   GFEQ KADPCVFRK+VD+   M++V++VDDIL    D+   +   A L +KF  K++G+ +++ GC I R+ +   L+  Q  Y++SM++RFDVK   ++PA  G     K        E EE   +P REA+G++MW +T +RPD++ AVRAVAR    P   H  A+ KI  YL  T+D GITY  +G GL +  Y D+ + A  + RRSVSG    +    +S  S+ Q + +  ++EAEY+A  E VK+ LF+R V  F+ P     ++ VLEDN GAI L  N  +S RTKHIDV++H +R
Sbjct: 1257 IAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR-------EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIR 1581          
BLAST of mRNA_F-serratus_M_contig97.21040.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 5.900e-74
Identity = 140/335 (41.79%), Postives = 201/335 (60.00%), Query Frame = 1
Query:    1 VRRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDDEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMIKRFDVKKEDKVPAASGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGAYLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVLEDNGGAIKLATNKHASRRTKHIDVKHHLVR 1005
            + +  +AIYGL Q+GR W     D +   GFEQ KADPCVFRK+VD+   M++V++VDDIL    D+   +   A L +KF  K++G+ +++ GC I R+ +   L+  Q  Y++SM++RFDVK   ++PA  G     K        E EE   +P REA+G++MW +T +RPD++ AVRAVAR    P   H  A+ KI  YL  T+D GITY  +G GL +  Y D+ + A  + RRSVSG    +    +S  S+ Q + +  ++EAEY+A  E VK+ LF+R V  F+ P     ++ VLEDN GAI L  N  +S RTKHIDV++H +R
Sbjct: 1420 IAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKR-------EDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIR 1744          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig97.21040.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JLN0_9PHAE1.340e-7941.81Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JFG2_9PHAE3.680e-7942.11Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQB8_9PHAE1.080e-7741.81Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6G0MK94_9STRA1.360e-7542.01Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A3VCN8_9STRA3.210e-7542.39Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K2R1_9PHAE1.850e-7441.81Integrase catalytic domain-containing protein n=3 ... [more]
A0A6H5KSG8_9PHAE3.340e-7441.79Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A4F359_9STRA3.580e-7442.01Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE5.770e-7441.79Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE5.900e-7441.79Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig97contigF-serratus_M_contig97:864216..865238 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score233.0
Seed ortholog evalue2e-58
Seed eggNOG ortholog67593.Physo139221
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QGIS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons1
Model size1023
Cds size1023
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932751.8251836-CDS-F-serratus_M_contig97:864215..8652381622932751.8251836-CDS-F-serratus_M_contig97:864215..865238Fucus serratus maleCDSF-serratus_M_contig97 864216..865238 +
1690964456.4157012-CDS-F-serratus_M_contig97:864215..8652381690964456.4157012-CDS-F-serratus_M_contig97:864215..865238Fucus serratus maleCDSF-serratus_M_contig97 864216..865238 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig97.21040.1prot_F-serratus_M_contig97.21040.1Fucus serratus malepolypeptideF-serratus_M_contig97 864216..865238 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig97.21040.1

>prot_F-serratus_M_contig97.21040.1 ID=prot_F-serratus_M_contig97.21040.1|Name=mRNA_F-serratus_M_contig97.21040.1|organism=Fucus serratus male|type=polypeptide|length=341bp
VRRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDDEAE
MVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRN
RKTRELKFDQHLYVESMIKRFDVKKEDKVPAASGVPTLSKADEPQSPEEK
EEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMK
IFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGAYLDTRRSVSGAVLMLA
KGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVG
AVNVLEDNGGAIKLATNKHASRRTKHIDVKHHLVRDASNRK
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mRNA from alignment at F-serratus_M_contig97:864216..865238+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig97.21040.1 ID=mRNA_F-serratus_M_contig97.21040.1|Name=mRNA_F-serratus_M_contig97.21040.1|organism=Fucus serratus male|type=mRNA|length=1023bp|location=Sequence derived from alignment at F-serratus_M_contig97:864216..865238+ (Fucus serratus male)
GTAAGACGGCTCAACAAGGCCATTTACGGACTCGTGCAGGCGGGGAGGTG TTGGAACAATAAGTTCTGTGACGACATGACGGCGATTGGGTTCGAGCAGG CAAAGGCGGACCCGTGCGTGTTCCGCAAGGTCGTTGACGATGAGGCGGAG ATGGTGGTGGTCGTGCACGTAGACGACATCCTGGCCCACGCAAAAGACAA AGCGACGATGGATAGATTCGCGGCCGAGCTCGGGCAGAAGTTTAAGTTGA AGGACATGGGGGACGCCGAATACTACATGGGCTGTCACATTACCCGGAAC CGCAAGACGCGTGAGTTAAAGTTCGACCAACACCTGTACGTGGAGTCGAT GATAAAGAGGTTCGATGTCAAGAAGGAAGACAAGGTACCGGCTGCGTCGG GGGTGCCGACGCTCTCAAAGGCGGATGAGCCGCAAAGCCCAGAGGAAAAG GAAGAGATGAAGATGTTCCCGTACCGAGAGGCAGTGGGGGCGCTCATGTG GACGGCGACGATGACACGGCCGGATATCGCGTGCGCCGTACGCGCTGTGG CCAGGTTCTGCGAAAACCCCGGGCCAGCGCATAAGAAGGCAGTGATGAAG ATCTTCCAGTATCTCCTCCACACGAAAGATTGGGGAATTACGTATGGTGG ACAGGGCTGTGGACTCTGCATGGAAGCGTATACGGATTCGGATTTCGGAG CCTACCTGGACACAAGACGATCGGTTTCAGGTGCGGTGTTGATGTTGGCC AAGGGGGCGATTAGTTGGCACTCTAGAATGCAAGAGGTAACGGCAGCAGG TACCTCGGAGGCAGAGTACGTTGCCTTAGCGGAGGCAGTCAAGGATGTAC TGTTTTTGAGACAGGTGCAGGAGTTCATGGAACCGTCAATGAGGGTCGGT GCGGTAAATGTGCTTGAAGATAATGGGGGGGCCATTAAGCTGGCCACAAA CAAGCATGCTAGCCGTAGGACTAAGCACATTGATGTGAAGCATCACCTAG TGAGGGACGCGTCTAACCGCAAA
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Coding sequence (CDS) from alignment at F-serratus_M_contig97:864216..865238+

>mRNA_F-serratus_M_contig97.21040.1 ID=mRNA_F-serratus_M_contig97.21040.1|Name=mRNA_F-serratus_M_contig97.21040.1|organism=Fucus serratus male|type=CDS|length=2046bp|location=Sequence derived from alignment at F-serratus_M_contig97:864216..865238+ (Fucus serratus male)
GTAAGACGGCTCAACAAGGCCATTTACGGACTCGTGCAGGCGGGGAGGTG
TTGGAACAATAAGTTCTGTGACGACATGACGGCGATTGGGTTCGAGCAGG
CAAAGGCGGACCCGTGCGTGTTCCGCAAGGTCGTTGACGATGAGGCGGAG
ATGGTGGTGGTCGTGCACGTAGACGACATCCTGGCCCACGCAAAAGACAA
AGCGACGATGGATAGATTCGCGGCCGAGCTCGGGCAGAAGTTTAAGTTGA
AGGACATGGGGGACGCCGAATACTACATGGGCTGTCACATTACCCGGAAC
CGCAAGACGCGTGAGTTAAAGTTCGACCAACACCTGTACGTGGAGTCGAT
GATAAAGAGGTTCGATGTCAAGAAGGAAGACAAGGTACCGGCTGCGTCGG
GGGTGCCGACGCTCTCAAAGGCGGATGAGCCGCAAAGCCCAGAGGAAAAG
GAAGAGATGAAGATGTTCCCGTACCGAGAGGCAGTGGGGGCGCTCATGTG
GACGGCGACGATGACACGGCCGGATATCGCGTGCGCCGTACGCGCTGTGG
CCAGGTTCTGCGAAAACCCCGGGCCAGCGCATAAGAAGGCAGTGATGAAG
ATCTTCCAGTATCTCCTCCACACGAAAGATTGGGGAATTACGTATGGTGG
ACAGGGCTGTGGACTCTGCATGGAAGCGTATACGGATTCGGATTTCGGAG
CCTACCTGGACACAAGACGATCGGTTTCAGGTGCGGTGTTGATGTTGGCC
AAGGGGGCGATTAGTTGGCACTCTAGAATGCAAGAGGTAACGGCAGCAGG
TACCTCGGAGGCAGAGTACGTTGCCTTAGCGGAGGCAGTCAAGGATGTAC
TGTTTTTGAGACAGGTGCAGGAGTTCATGGAACCGTCAATGAGGGTCGGT
GCGGTAAATGTGCTTGAAGATAATGGGGGGGCCATTAAGCTGGCCACAAA
CAAGCATGCTAGCCGTAGGACTAAGCACATTGATGTGAAGCATCACCTAG
TGAGGGACGCGTCTAACCGCAAAGTAAGACGGCTCAACAAGGCCATTTAC
GGACTCGTGCAGGCGGGGAGGTGTTGGAACAATAAGTTCTGTGACGACAT
GACGGCGATTGGGTTCGAGCAGGCAAAGGCGGACCCGTGCGTGTTCCGCA
AGGTCGTTGACGATGAGGCGGAGATGGTGGTGGTCGTGCACGTAGACGAC
ATCCTGGCCCACGCAAAAGACAAAGCGACGATGGATAGATTCGCGGCCGA
GCTCGGGCAGAAGTTTAAGTTGAAGGACATGGGGGACGCCGAATACTACA
TGGGCTGTCACATTACCCGGAACCGCAAGACGCGTGAGTTAAAGTTCGAC
CAACACCTGTACGTGGAGTCGATGATAAAGAGGTTCGATGTCAAGAAGGA
AGACAAGGTACCGGCTGCGTCGGGGGTGCCGACGCTCTCAAAGGCGGATG
AGCCGCAAAGCCCAGAGGAAAAGGAAGAGATGAAGATGTTCCCGTACCGA
GAGGCAGTGGGGGCGCTCATGTGGACGGCGACGATGACACGGCCGGATAT
CGCGTGCGCCGTACGCGCTGTGGCCAGGTTCTGCGAAAACCCCGGGCCAG
CGCATAAGAAGGCAGTGATGAAGATCTTCCAGTATCTCCTCCACACGAAA
GATTGGGGAATTACGTATGGTGGACAGGGCTGTGGACTCTGCATGGAAGC
GTATACGGATTCGGATTTCGGAGCCTACCTGGACACAAGACGATCGGTTT
CAGGTGCGGTGTTGATGTTGGCCAAGGGGGCGATTAGTTGGCACTCTAGA
ATGCAAGAGGTAACGGCAGCAGGTACCTCGGAGGCAGAGTACGTTGCCTT
AGCGGAGGCAGTCAAGGATGTACTGTTTTTGAGACAGGTGCAGGAGTTCA
TGGAACCGTCAATGAGGGTCGGTGCGGTAAATGTGCTTGAAGATAATGGG
GGGGCCATTAAGCTGGCCACAAACAAGCATGCTAGCCGTAGGACTAAGCA
CATTGATGTGAAGCATCACCTAGTGAGGGACGCGTCTAACCGCAAA
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