prot_F-serratus_M_contig97.21011.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig97.21011.1
Unique Nameprot_F-serratus_M_contig97.21011.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length236
Homology
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BLAST of mRNA_F-serratus_M_contig97.21011.1 vs. uniprot
Match: A0A1X2GBJ7_9FUNG (Uncharacterized protein n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GBJ7_9FUNG)

HSP 1 Score: 92.8 bits (229), Expect = 1.470e-19
Identity = 51/173 (29.48%), Postives = 90/173 (52.02%), Query Frame = 0 
Query:   46 EVLGRDLVYSGWRKIVKKNVRFDGNKSFVFDVVHQENPS---VAVFVWHTASKTLTLIKEFSPGREMVAHGVVAGVYEKNKHDSPLQAAKFELEEEAHLSGGTWHSLCE-DAETTINADKYSSNEFFCWLVVDPYVTPTPRALDDEESIEIERGITMQRAMSMLDRGELSMVS 214
            +VL   + +  +  +  +   FD  +   +DVV    P    V VF ++T +KT  ++KE+  G   + +  VAG  ++ KH SP+++AK+EL EEA L+GG W  L   + +  I+  K+  N F  +L ++P +   PR  D EE I++   + +      + +GE+ + S
Sbjct:   15 KVLVETISHKRFITVWNRQTEFDDGRIIEWDVVGHHTPYPTFVVVFAYNTTNKTTCILKEYCQGTNEIKYTCVAGSVDRRKHQSPMESAKYELSEEARLTGGDWVCLLPPEQQDGISELKWGRNRFVPYLCLNPEIDAKPRQRDLEECIQVVNDVPIADLKRFITKGEMMLPS 187
[Close]
BLAST of mRNA_F-serratus_M_contig97.21011.1 vs. uniprot
Match: A0A2V3ILF7_9FLOR (Nudix hydrolase domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILF7_9FLOR)

HSP 1 Score: 81.3 bits (199), Expect = 7.910e-15
Identity = 56/193 (29.02%), Postives = 89/193 (46.11%), Query Frame = 0 
Query:   45 YEVLGRDLVYSGWRKIVKKNVRFDGNKSFVFDVVHQ--ENPSVAVFV---WHTASKTLTLIKEFSPGREMVAHGVVAGVYEKNKHDSPLQAAKFELEEEAHLSGGTWHSLCE-DAETTINADKYSSNEFFCWLVVDPYVTPTPRALDDEESIEIERGITMQRAMSMLDRGELSMVSSFVVLAGVRKLRQLGLV 231
            Y+VL   +VY  + ++  + +RF   + F FDV  +  +N S AV     +   +KT TL++E++       +    G YE++KH S    A  ELEEEAHL    W +L   D       DKY       +L    +        D+EE+IE+ RG+T  +   ++  G L   +    L  + +L  L L+
Sbjct:   57 YKVLSDKVVYDRYARVYSRQIRFPDGRQFDFDVWGRVWKNDSFAVVTVVPFDRPTKTFTLVREYNIAHARYVYSFPQGQYERSKHRSIRHGAAAELEEEAHLQCDEWVNLLHNDLGRGAPQDKYQRETVHYFLCTAAHHVQHAADRDEEENIEVVRGVTATQLRQLVAAGALQSNNIAAALMALHELSTLRLL 249
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig97.21011.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A1X2GBJ7_9FUNG1.470e-1929.48Uncharacterized protein n=1 Tax=Hesseltinella vesi... [more]
A0A2V3ILF7_9FLOR7.910e-1529.02Nudix hydrolase domain-containing protein n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.79.10coord: 41..228
e-value: 7.4E-20
score: 73.3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..235
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
IPR015797NUDIX hydrolase-like domain superfamilySUPERFAMILY55811Nudixcoord: 54..209

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig97contigF-serratus_M_contig97:223898..231872 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig97.21011.1mRNA_F-serratus_M_contig97.21011.1Fucus serratus malemRNAF-serratus_M_contig97 223130..232237 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig97.21011.1 ID=prot_F-serratus_M_contig97.21011.1|Name=mRNA_F-serratus_M_contig97.21011.1|organism=Fucus serratus male|type=polypeptide|length=236bp
MVFVSRPLVMFIASRAQGRFLPFGIARRCKAISSTPDGGKSRHEYEVLGR
DLVYSGWRKIVKKNVRFDGNKSFVFDVVHQENPSVAVFVWHTASKTLTLI
KEFSPGREMVAHGVVAGVYEKNKHDSPLQAAKFELEEEAHLSGGTWHSLC
EDAETTINADKYSSNEFFCWLVVDPYVTPTPRALDDEESIEIERGITMQR
AMSMLDRGELSMVSSFVVLAGVRKLRQLGLVSPGC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015797NUDIX_hydrolase-like_dom_sf