prot_F-serratus_M_contig97.21000.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig97.21000.1
Unique Nameprot_F-serratus_M_contig97.21000.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length187
Homology
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BLAST of mRNA_F-serratus_M_contig97.21000.1 vs. uniprot
Match: D7G6B6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6B6_ECTSI)

HSP 1 Score: 209 bits (532), Expect = 4.760e-66
Identity = 109/180 (60.56%), Postives = 130/180 (72.22%), Query Frame = 0 
Query:    1 MADRRARRRTNSRKVHAEDGIQKAKPGEIADMLHMDMMAHRKKTADFNASWKRVLCFAALGLSGVSILKAIEKASEGDPGWMERCLTSANAGLIAAWVALVDLVNHRARSTSLFVKLTVFALSLYQLVAWWNSREGGGQPDFPVAVILFIVAVXXXXSMESTLETAEKAFRASGSLANKV 180
            M D   RRRT   KV  EDGIQ+ +PGEIA +LHMDM AH+KKTADFN  WKR L FA++GL+ VS+LKA+EKA EGD GW+ER LTSANAGLI  WV+ VDL   +A  + L+ K+  FA+SLYQLV+WW SR+     DFPVAVIL IV V    SM+S L  A+ AFRAS +LA KV
Sbjct:    1 MRDGNPRRRTARTKVQTEDGIQRPRPGEIAHLLHMDMAAHQKKTADFNNGWKRALLFASIGLAAVSLLKAVEKAREGDLGWLERGLTSANAGLIGFWVSQVDLQTDKA--SLLYCKIAAFAVSLYQLVSWWTSRQSEIHVDFPVAVILLIVVVASVASMKSALNEADNAFRASEALAEKV 178
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig97.21000.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G6B6_ECTSI4.760e-6660.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 143..163
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..53
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 105..112
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 66..70
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..70
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 54..65
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 164..186
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 113..131
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 71..85
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 86..104
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 132..142
NoneNo IPR availableTMHMMTMhelixcoord: 86..105
NoneNo IPR availableTMHMMTMhelixcoord: 141..163
NoneNo IPR availableTMHMMTMhelixcoord: 112..131
NoneNo IPR availableTMHMMTMhelixcoord: 49..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig97contigF-serratus_M_contig97:15786..17729 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig97.21000.1mRNA_F-serratus_M_contig97.21000.1Fucus serratus malemRNAF-serratus_M_contig97 15691..18057 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig97.21000.1 ID=prot_F-serratus_M_contig97.21000.1|Name=mRNA_F-serratus_M_contig97.21000.1|organism=Fucus serratus male|type=polypeptide|length=187bp
MADRRARRRTNSRKVHAEDGIQKAKPGEIADMLHMDMMAHRKKTADFNAS
WKRVLCFAALGLSGVSILKAIEKASEGDPGWMERCLTSANAGLIAAWVAL
VDLVNHRARSTSLFVKLTVFALSLYQLVAWWNSREGGGQPDFPVAVILFI
VAVVAIASMESTLETAEKAFRASGSLANKVGQGSRR*
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