prot_F-serratus_M_contig969.20999.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig969.20999.1
Unique Name	prot_F-serratus_M_contig969.20999.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	173

Homology

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BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5L520_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L520_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 2.650e-66
Identity = 102/173 (58.96%), Postives = 123/173 (71.10%), Query Frame = 0

Query:    1 MTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 173
            M VAA  G +IE +RCDKGGE TG  FR  C  + I +EY ATNTPQQ GV ERD  TLA +TRCL+K G+FPP MWGELM  A YL NRSPH  +  ATPYS++ +  P L+G R IG RAFVH + Y KKL++RAFEGKLC +  +S+ YR+  P  G VVESRN TF+E+
Sbjct:   22 MCVAAAGGYQIETIRCDKGGENTGSEFRNYCKNSAITLEYAATNTPQQIGVLERDRQTLAGVTRCLLKDGDFPPSMWGELMLIAAYLLNRSPHLAVGGATPYSKLRNRSPYLSGFRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVFNPFNGAVVESRNVTFIES 194

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BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5K5H2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H2_9PHAE)

HSP 1 Score: 216 bits (549), Expect = 1.290e-64
Identity = 103/162 (63.58%), Postives = 121/162 (74.69%), Query Frame = 0

Query:    1 MTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTV 162
            M VAA  G RIE +RCDKGGE TG  FR  C  + I +EY ATNTPQQ GVSERDG TLA +TRCL+K G+FPP MWGELM TA YL NRSPHS L  ATPYS++H+  PDL+GLR IG RAFVH + Y KKL++RAFEGKLC +  +S+ YR+  P+ G V
Sbjct:   24 MCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAV 185

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BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5KHY1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHY1_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 7.570e-64
Identity = 98/162 (60.49%), Postives = 116/162 (71.60%), Query Frame = 0

Query:    1 MTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTV 162
            M VAA  G  IE +RCDKGGE TG  FR  C  + I +EY ATNTPQQ+ V ERDG +LA +TRCL+K G FPP MWGELM TA YL NRSPHS L  ATPYS++H   PDL+GLR IG R FVH D Y KKL++RAFEGKLC +  +S+ YR+  P+ G +
Sbjct:  106 MCVAAAGGYLIETIRCDKGGEKTGSEFRDYCKNSAIKLEYAATNTPQQSAVLERDGQSLAGVTRCLLKDGVFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHKKSPDLSGLRVIGARTFVHHDRYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAI 267

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BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5J8P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8P7_9PHAE)

HSP 1 Score: 221 bits (563), Expect = 8.630e-64
Identity = 107/172 (62.21%), Postives = 126/172 (73.26%), Query Frame = 0

Query:    1 MTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLE 172
            M VAA  G RIE +RCDKGGE  G  FR  C  + I +EY ATNTPQQ GVSERDG TLA +TRCL+K G+FPP MWGELM TA YL NRS HS L  ATPYS++H+  PDL+GLR IG RAFVH + Y KKL++RAFEGKLC +  +S+ Y +  P+   VVESRN TF+E
Sbjct:  499 MCVAAAGGYRIETIRCDKGGENAGSEFRNYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSSHSALGGATPYSKLHNQSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYWVLNPSNRAVVESRNVTFIE 670

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BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5L4X4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4X4_9PHAE)

HSP 1 Score: 213 bits (541), Expect = 2.880e-63
Identity = 101/166 (60.84%), Postives = 124/166 (74.70%), Query Frame = 0

Query:    8 GLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 173
            G RIE LRCDKGGE TG+  R  C  + I +E+ ATNTPQ+ GVSERDG TLA +TR L++ G+FP  MWGELM TA YL NR+PH+ L  ATPYS++++  PDL+ LRAIG RAFVH + Y KKL++RAFEGKLC Y  +SK YRI++  K  V ESRN TF+ET
Sbjct:  282 GYRIEILRCDKGGENTGEEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGELMMTAAYLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVHHERYKKKLDDRAFEGKLCGYGPDSKTYRIYVEGKDKVYESRNVTFIET 447

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BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5KS50_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS50_9PHAE)

HSP 1 Score: 215 bits (547), Expect = 3.530e-63
Identity = 106/173 (61.27%), Postives = 126/173 (72.83%), Query Frame = 0

Query:    1 MTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 173
            M VAA    RI  +RCDKGGE TG  FR  C  + I +EY ATNTPQQ GVSERDG TLA +TRCL+   +FPP MWGELM TA YL NRSPHS L  ATPYS++H+  PDL+GLR  G RAFVH + Y KKL++RAFEGKLC +  +S+ YR+  P+ G VVESRN TF+E+
Sbjct:    1 MCVAAAGDYRIVTIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLL---DFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVNGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIES 170

[Close]

BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5JRS9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRS9_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 2.910e-62
Identity = 106/171 (61.99%), Postives = 126/171 (73.68%), Query Frame = 0

Query:    3 VAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 173
            VAAPLG RIE +RCD+GGE     F   C+ +GI IEY ATNTPQQNGVS RDG TL  ITRCL++ G FPP +WGELM TA  L+NRSPHS L   TPY +++  E DL+ LR IG R+FV+ + YTKKL +R FEGKLC +S +SK YRI+ PA G VVESRN TF+ET
Sbjct: 1039 VAAPLGRRIEIIRCDRGGENVANIFTAYCMDSGITIEYAATNTPQQNGVSGRDGQTLTTITRCLMEDGAFPPTLWGELMMTAVDLSNRSPHSVLGGVTPYFKMYGKEADLSRLRVIGARSFVNYERYTKKLSDRTFEGKLCGFSRDSKTYRIYNPATGNVVESRNVTFIET 1209

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BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5L8D5_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D5_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 3.240e-62
Identity = 109/207 (52.66%), Postives = 130/207 (62.80%), Query Frame = 0

Query:    1 MTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTL----------------------------------AKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 173
            M VAA  G RIE +RCDKGGE TG  FR  C  + I ++Y ATNTPQQ GVSERDG TL                                  A +TRCL+K G+FPP MWGELM TA YL NRSPHS L  ATPYS++H+  PDL+ LR IG RAFVH + Y KKL++RAFEGKLC +  +S+ YR+  P+ G VVESRN TF+E+
Sbjct:   77 MCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLKYVATNTPQQIGVSERDGQTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSELRIIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIES 283

[Close]

BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5LEW4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEW4_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 8.420e-62
Identity = 101/173 (58.38%), Postives = 121/173 (69.94%), Query Frame = 0

Query:    1 MTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 173
            M VAA  G RIE + CDK GE TG  F      + I +EY ATNTPQQ G SERDG TL  +TRCL+K G+FPP MWGELM TA YL NRS H  L  ATPYS++H+  PDL+G R IG RAFVH + Y KKL++RAFEGKLC +  +S+ YR+   + G VVESRN TF+E+
Sbjct:   43 MCVAAAGGYRIETIHCDKEGENTGSEFGDYYKNSDIKLEYAATNTPQQIGASERDGQTLYGVTRCLLKHGDFPPSMWGELMLTAAYLLNRSAHLALGGATPYSKLHNKSPDLSGFRVIGARAFVHHERYRKKLDDRAFEGKLCGFGVDSQTYRVFNQSNGAVVESRNMTFIES 215

[Close]

BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5JR90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR90_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 1.200e-61
Identity = 99/166 (59.64%), Postives = 123/166 (74.10%), Query Frame = 0

Query:    8 GLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 173
            G RIE LRCDKGGE TG+  R  C  + I +E+ ATNTPQ+ GVSERDG TLA +TR L++ G+FP  MWGELM TA YL NR+PH+ L  ATPYS++++  PDL+  RAIG RAFVH + Y KKL++RAFEGKLC Y  +SK YRI++  +  V ESRN TF+ET
Sbjct:  324 GYRIEVLRCDKGGENTGEEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGELMMTAAYLTNRTPHAALGGATPYSKMYNTTPDLSRHRAIGARAFVHHERYKKKLDDRAFEGKLCGYGPDSKTYRIYVEGRDRVYESRNVTFIET 489

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L520_9PHAE	2.650e-66	58.96	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5K5H2_9PHAE	1.290e-64	63.58	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KHY1_9PHAE	7.570e-64	60.49	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5J8P7_9PHAE	8.630e-64	62.21	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L4X4_9PHAE	2.880e-63	60.84	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KS50_9PHAE	3.530e-63	61.27	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JRS9_9PHAE	2.910e-62	61.99	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5L8D5_9PHAE	3.240e-62	52.66	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5LEW4_9PHAE	8.420e-62	58.38	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JR90_9PHAE	1.200e-61	59.64	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 7..139 e-value: 2.3E-15 score: 58.3
None	No IPR available	PANTHER	PTHR11439:SF250		coord: 11..172
IPR039537	Retrotransposon Ty1/copia-like	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 11..172
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..109 score: 11.57
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 6..114

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig969	contig	F-serratus_M_contig969:279436..279954 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig969.20999.1	mRNA_F-serratus_M_contig969.20999.1	Fucus serratus male	mRNA	F-serratus_M_contig969 279436..280146 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig969.20999.1 ID=prot_F-serratus_M_contig969.20999.1|Name=mRNA_F-serratus_M_contig969.20999.1|organism=Fucus serratus male|type=polypeptide|length=173bp
MTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNG
VSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEAT
PYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSK
AYRIHIPAKGTVVESRNATFLET

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036397	RNaseH_sf
IPR039537	Retrotran_Ty1/copia-like
IPR001584	Integrase_cat-core
IPR012337	RNaseH-like_sf