mRNA_F-serratus_M_contig969.20999.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig969.20999.1
Unique NamemRNA_F-serratus_M_contig969.20999.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5K500_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K500_9PHAE)

HSP 1 Score: 288 bits (738), Expect = 3.090e-89
Identity = 140/240 (58.33%), Postives = 174/240 (72.50%), Query Frame = 1 
Query:    1 PKKTMRKTIRPMQLVYTDLMGLFTPAAK---GGYRFVSKFTDDYSRMKEIFLLKNKTEAAESLHQ*NMTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 711
            PK++ R+  RP QLV  D MG   P AK   G + +  K TDDY++MKE++LL+ K++  E++H  NM VAA  G RIE +RCDKGGE TG  FR  C  + I +EY ATNTPQQ GVSERDG TLA +TRCL+K G+FPP MWGELM TA YL NRSPHS L  ATPYS++H+  PDL+GLR IG RAFVH + Y KKL++RAFEGKLC +  +S+ YR+  P+ G VVESRN TF+E+
Sbjct:   91 PKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIES 330
[Close]
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5KCM0_9PHAE (Integrase catalytic domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCM0_9PHAE)

HSP 1 Score: 281 bits (720), Expect = 9.010e-89
Identity = 138/240 (57.50%), Postives = 172/240 (71.67%), Query Frame = 1 
Query:    1 PKKTMRKTIRPMQLVYTDLMGLFTPAAK---GGYRFVSKFTDDYSRMKEIFLLKNKTEAAESLHQ*NMTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 711
            PK++ R+  RP QLV  D MG   P AK   G + +  K TDDY++MKE++LL+ K++  E++H  NM VAA  G RIE +RCDKGGE TG  FR  C  + I +EY ATNTPQQ GVSERDG TLA +TRCL+K G+FPP MWGELM TA YL NRSPHS L  ATPYS++H+  PDL+GLR IG RAFVH +   KKL++RAFEGKLC +  +S+ YR+  P+ G  VESRN TF+E+
Sbjct:   91 PKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDNCKNSAIKLEYAATNTPQQLGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERCRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAGVESRNVTFIES 330
[Close]
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5K1R7_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1R7_9PHAE)

HSP 1 Score: 286 bits (731), Expect = 1.040e-87
Identity = 139/240 (57.92%), Postives = 173/240 (72.08%), Query Frame = 1 
Query:    1 PKKTMRKTIRPMQLVYTDLMGLFTPAAK---GGYRFVSKFTDDYSRMKEIFLLKNKTEAAESLHQ*NMTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 711
            PK++ R+  RP QLV  D MG   P AK   G + +  K TDDY++MKE++LL+ K++  E++H  NM VAA  G RIE +RCDKGGE TG  FR  C  + I +EY ATNTPQQ G SERDG TLA +TRCL+K G+FPP MWGELM TA YL NRSPHS L  ATPYS++H+  PDL+GLR IG RAFVH + Y KKL++RAFEGKLC +  +S+ YR+  P+ G VVESRN TF+E+
Sbjct:   91 PKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGGSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIES 330
[Close]
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE)

HSP 1 Score: 288 bits (738), Expect = 3.070e-87
Identity = 140/240 (58.33%), Postives = 174/240 (72.50%), Query Frame = 1 
Query:    1 PKKTMRKTIRPMQLVYTDLMGLFTPAAK---GGYRFVSKFTDDYSRMKEIFLLKNKTEAAESLHQ*NMTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 711
            PK++ R+  RP QLV  D MG   P AK   G + +  K TDDY++MKE++LL+ K++  E++H  NM VAA  G RIE +RCDKGGE TG  FR  C  + I +EY ATNTPQQ GVSERDG TLA +TRCL+K G+FPP MWGELM TA YL NRSPHS L  ATPYS++H+  PDL+GLR IG RAFVH + Y KKL++RAFEGKLC +  +S+ YR+  P+ G VVESRN TF+E+
Sbjct:   91 PKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIES 330
[Close]
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5KCT3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT3_9PHAE)

HSP 1 Score: 288 bits (738), Expect = 6.330e-87
Identity = 140/240 (58.33%), Postives = 174/240 (72.50%), Query Frame = 1 
Query:    1 PKKTMRKTIRPMQLVYTDLMGLFTPAAK---GGYRFVSKFTDDYSRMKEIFLLKNKTEAAESLHQ*NMTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 711
            PK++ R+  RP QLV  D MG   P AK   G + +  K TDDY++MKE++LL+ K++  E++H  NM VAA  G RIE +RCDKGGE TG  FR  C  + I +EY ATNTPQQ GVSERDG TLA +TRCL+K G+FPP MWGELM TA YL NRSPHS L  ATPYS++H+  PDL+GLR IG RAFVH + Y KKL++RAFEGKLC +  +S+ YR+  P+ G VVESRN TF+E+
Sbjct:   91 PKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIES 330
[Close]
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5KF63_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF63_9PHAE)

HSP 1 Score: 269 bits (687), Expect = 3.910e-86
Identity = 130/227 (57.27%), Postives = 163/227 (71.81%), Query Frame = 1 
Query:   40 LVYTDLMGLFTPAAK---GGYRFVSKFTDDYSRMKEIFLLKNKTEAAESLHQ*NMTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 711
            LV  D MG     AK   G + +  K TDDY++MKE++L + K++  E++H  NM VAA  G +IE +RCDKGGE TG  FR  C  + I +EY ATNTPQQ GVSERDG TLA +TRCL+K G+FPP MWGE+M TA YL NRSPHS L  ATPYS++H+  PDL+GLR IG RAFVH + Y KKL++RAFEGKLC +  +S+ YR+  P+ G VVESRN TF+E+
Sbjct:   58 LVVIDNMGSVNLPAKYKGGSFPYACKITDDYTKMKEVYLPRKKSDTTEAVHTYNMCVAAAGGYQIETIRCDKGGENTGSDFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGEIMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLDPSNGAVVESRNVTFIES 284
[Close]
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5JSL6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSL6_9PHAE)

HSP 1 Score: 283 bits (725), Expect = 4.730e-86
Identity = 139/240 (57.92%), Postives = 172/240 (71.67%), Query Frame = 1 
Query:    1 PKKTMRKTIRPMQLVYTDLMGLFTPAAK---GGYRFVSKFTDDYSRMKEIFLLKNKTEAAESLHQ*NMTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 711
            PK++ R+  R  QLV  D MG   P AK   G + +  K TDDY++MKE++LL+ K++  E++H  NM VAA  G RIE +RCDKGGE TG  FR  C  + I +EY ATNTPQQ GVSERDG TLA +TRCL+K G+FPP MWGELM TA YL NRSPHS L  ATPYS++H+  PDL GLR IG RAFVH + Y KKL++RAFEGKLC +  +S+ YR+  P+ G VVESRN TF+E+
Sbjct:  287 PKQSTRELSRSGQLVVIDNMGPANPPAKYQGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIEAIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLLGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIES 526
[Close]
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5JRJ1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ1_9PHAE)

HSP 1 Score: 280 bits (717), Expect = 2.240e-84
Identity = 136/240 (56.67%), Postives = 173/240 (72.08%), Query Frame = 1 
Query:    1 PKKTMRKTIRPMQLVYTDLMGLFTPAAK---GGYRFVSKFTDDYSRMKEIFLLKNKTEAAESLHQ*NMTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLET 711
            PK++ R+  RP QLV  D +G   P AK   G + +  K TDDY+++KE++LL+ K+   E++H  N+ VAA  G RIE +RCDKGGE TG  FR  C  + I +EY ATNTPQQ GVSERDG TLA +TRCL+K G+FPP MWGELM TA YL NRSPHS L  ATPYS++H+  PDL+ LR IG RAFVH++ Y KKL++RAFEGKLC +  +S+ YR+  P+ G VVESRN TF+E+
Sbjct:   91 PKQSTRELSRPGQLVVIDNVGPVNPPAKYNGGSFPYACKITDDYTKVKEVYLLRKKSNTTEAVHTYNICVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSRLRVIGARAFVHQERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIES 330
[Close]
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5KHY1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHY1_9PHAE)

HSP 1 Score: 260 bits (665), Expect = 3.700e-84
Identity = 127/229 (55.46%), Postives = 159/229 (69.43%), Query Frame = 1 
Query:    1 PKKTMRKTIRPMQLVYTDLMGLFTPAAK---GGYRFVSKFTDDYSRMKEIFLLKNKTEAAESLHQ*NMTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTV 678
            PK++ R+  RP QLV  D MG   P AK   G + +  K TDDY++MKE++LL+ K++  E++H  NM VAA  G  IE +RCDKGGE TG  FR  C  + I +EY ATNTPQQ+ V ERDG +LA +TRCL+K G FPP MWGELM TA YL NRSPHS L  ATPYS++H   PDL+GLR IG R FVH D Y KKL++RAFEGKLC +  +S+ YR+  P+ G +
Sbjct:   39 PKQSTRELSRPGQLVVIDNMGPVNPPAKNKGGFFPYECKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYLIETIRCDKGGEKTGSEFRDYCKNSAIKLEYAATNTPQQSAVLERDGQSLAGVTRCLLKDGVFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHKKSPDLSGLRVIGARTFVHHDRYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAI 267
[Close]
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Match: A0A6H5J8P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8P7_9PHAE)

HSP 1 Score: 277 bits (709), Expect = 4.100e-83
Identity = 136/239 (56.90%), Postives = 169/239 (70.71%), Query Frame = 1 
Query:    1 PKKTMRKTIRPMQLVYTDLMGLFTPAAK---GGYRFVSKFTDDYSRMKEIFLLKNKTEAAESLHQ*NMTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNGVSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEATPYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSKAYRIHIPAKGTVVESRNATFLE 708
            PK++ R+  RP QLV  D MG   P AK   G + +  K TDDY++MKE++LL+ K++  E++H  NM VAA  G RIE +RCDKGGE  G  FR  C  + I +EY ATNTPQQ GVSERDG TLA +TRCL+K G+FPP MWGELM TA YL NRS HS L  ATPYS++H+  PDL+GLR IG RAFVH + Y KKL++RAFEGKLC +  +S+ Y +  P+   VVESRN TF+E
Sbjct:  432 PKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENAGSEFRNYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSSHSALGGATPYSKLHNQSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYWVLNPSNRAVVESRNVTFIE 670
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig969.20999.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K500_9PHAE3.090e-8958.33Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KCM0_9PHAE9.010e-8957.50Integrase catalytic domain-containing protein n=5 ... [more]
A0A6H5K1R7_9PHAE1.040e-8757.92Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JJR8_9PHAE3.070e-8758.33Integrase catalytic domain-containing protein n=11... [more]
A0A6H5KCT3_9PHAE6.330e-8758.33Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KF63_9PHAE3.910e-8657.27Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JSL6_9PHAE4.730e-8657.92Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JRJ1_9PHAE2.240e-8456.67Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KHY1_9PHAE3.700e-8455.46Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5J8P7_9PHAE4.100e-8356.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig969contigF-serratus_M_contig969:279436..280146 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score119.8
Seed ortholog evalue1.3e-24
Seed eggNOG ortholog4558.Sb07g028153.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.GAG-pre-integrase domain
EggNOG OGs37THH@33090,3GG2K@35493,3IMWS@38820,3M2QC@4447,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPoales
Best eggNOG OGNA|NA|NA
Exons1
Model size711
Cds size519
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932744.1170745-CDS-F-serratus_M_contig969:279435..2799541622932744.1170745-CDS-F-serratus_M_contig969:279435..279954Fucus serratus maleCDSF-serratus_M_contig969 279436..279954 -
1690964452.472387-CDS-F-serratus_M_contig969:279435..2799541690964452.472387-CDS-F-serratus_M_contig969:279435..279954Fucus serratus maleCDSF-serratus_M_contig969 279436..279954 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932744.1297276-UTR-F-serratus_M_contig969:279954..2801461622932744.1297276-UTR-F-serratus_M_contig969:279954..280146Fucus serratus maleUTRF-serratus_M_contig969 279955..280146 -
1690964452.4897738-UTR-F-serratus_M_contig969:279954..2801461690964452.4897738-UTR-F-serratus_M_contig969:279954..280146Fucus serratus maleUTRF-serratus_M_contig969 279955..280146 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig969.20999.1prot_F-serratus_M_contig969.20999.1Fucus serratus malepolypeptideF-serratus_M_contig969 279436..279954 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig969.20999.1

>prot_F-serratus_M_contig969.20999.1 ID=prot_F-serratus_M_contig969.20999.1|Name=mRNA_F-serratus_M_contig969.20999.1|organism=Fucus serratus male|type=polypeptide|length=173bp
MTVAAPLGLRIENLRCDKGGEYTGQGFRTLCVGAGINIEYTATNTPQQNG
VSERDGHTLAKITRCLVKGGEFPPFMWGELMFTATYLANRSPHSTLEEAT
PYSQIHSLEPDLTGLRAIGTRAFVHRDTYTKKLEERAFEGKLCRYSHNSK
AYRIHIPAKGTVVESRNATFLET
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mRNA from alignment at F-serratus_M_contig969:279436..280146-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig969.20999.1 ID=mRNA_F-serratus_M_contig969.20999.1|Name=mRNA_F-serratus_M_contig969.20999.1|organism=Fucus serratus male|type=mRNA|length=711bp|location=Sequence derived from alignment at F-serratus_M_contig969:279436..280146- (Fucus serratus male)
CCAAAGAAAACCATGCGAAAGACCATCAGACCTATGCAACTCGTCTACAC
GGACCTCATGGGACTATTCACACCGGCTGCGAAAGGAGGATACCGGTTCG
TCAGCAAGTTCACAGATGACTATTCGCGCATGAAGGAGATCTTCTTGCTC
AAGAACAAGACCGAGGCCGCCGAATCGCTACACCAGTAAAACATGACTGT
GGCCGCCCCGTTAGGACTCCGGATCGAGAATCTTCGATGCGACAAAGGTG
GCGAATATACTGGACAGGGGTTCAGGACCCTGTGCGTCGGAGCGGGGATC
AACATCGAGTATACCGCGACCAACACGCCACAGCAAAACGGAGTATCCGA
GAGAGATGGACATACACTGGCCAAGATCACCCGATGCCTTGTAAAGGGCG
GAGAATTTCCCCCGTTCATGTGGGGAGAGCTGATGTTCACGGCCACATAC
TTAGCCAACAGGTCCCCCCATTCCACTCTGGAAGAGGCCACCCCATACTC
CCAAATACACAGTTTGGAGCCGGACCTCACGGGCTTGCGCGCCATCGGAA
CCAGAGCATTCGTCCACCGTGATACTTACACCAAGAAGCTGGAAGAAAGG
GCCTTCGAGGGAAAACTGTGCCGATACAGCCACAACAGCAAGGCGTACCG
CATCCACATTCCGGCCAAAGGTACGGTCGTGGAGAGCCGGAACGCCACCT
TCCTGGAAACG
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Coding sequence (CDS) from alignment at F-serratus_M_contig969:279436..280146-

>mRNA_F-serratus_M_contig969.20999.1 ID=mRNA_F-serratus_M_contig969.20999.1|Name=mRNA_F-serratus_M_contig969.20999.1|organism=Fucus serratus male|type=CDS|length=1038bp|location=Sequence derived from alignment at F-serratus_M_contig969:279436..280146- (Fucus serratus male)
ATGACTGTGGCCGCCCCGTTAGGACTCCGGATCGAGAATCTTCGATGCGA
CAAAGGTGGCGAATATACTGGACAGGGGTTCAGGACCCTGTGCGTCGGAG
CGGGGATCAACATCGAGTATACCGCGACCAACACGCCACAGCAAAACGGA
GTATCCGAGAGAGATGGACATACACTGGCCAAGATCACCCGATGCCTTGT
AAAGGGCGGAGAATTTCCCCCGTTCATGTGGGGAGAGCTGATGTTCACGG
CCACATACTTAGCCAACAGGTCCCCCCATTCCACTCTGGAAGAGGCCACC
CCATACTCCCAAATACACAGTTTGGAGCCGGACCTCACGGGCTTGCGCGC
CATCGGAACCAGAGCATTCGTCCACCGTGATACTTACACCAAGAAGCTGG
AAGAAAGGGCCTTCGAGGGAAAACTGTGCCGATACAGCCACAACAGCAAG
GCGTACCGCATCCACATTCCGGCCAAAGGTACGGTCGTGGAGAGCCGGAA
CGCCACCTTCCTGGAAACGATGACTGTGGCCGCCCCGTTAGGACTCCGGA
TCGAGAATCTTCGATGCGACAAAGGTGGCGAATATACTGGACAGGGGTTC
AGGACCCTGTGCGTCGGAGCGGGGATCAACATCGAGTATACCGCGACCAA
CACGCCACAGCAAAACGGAGTATCCGAGAGAGATGGACATACACTGGCCA
AGATCACCCGATGCCTTGTAAAGGGCGGAGAATTTCCCCCGTTCATGTGG
GGAGAGCTGATGTTCACGGCCACATACTTAGCCAACAGGTCCCCCCATTC
CACTCTGGAAGAGGCCACCCCATACTCCCAAATACACAGTTTGGAGCCGG
ACCTCACGGGCTTGCGCGCCATCGGAACCAGAGCATTCGTCCACCGTGAT
ACTTACACCAAGAAGCTGGAAGAAAGGGCCTTCGAGGGAAAACTGTGCCG
ATACAGCCACAACAGCAAGGCGTACCGCATCCACATTCCGGCCAAAGGTA
CGGTCGTGGAGAGCCGGAACGCCACCTTCCTGGAAACG
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