prot_F-serratus_M_contig96.20926.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig96.20926.1
Unique Nameprot_F-serratus_M_contig96.20926.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length287
Homology
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BLAST of mRNA_F-serratus_M_contig96.20926.1 vs. uniprot
Match: D8LC59_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC59_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 4.900e-22
Identity = 94/247 (38.06%), Postives = 133/247 (53.85%), Query Frame = 0 
Query:   37 MEQHLRWARDLAEMVASEKLHPVVAAAATELESWRETPLVAADIVEDLKAAADQLLTNFDGIQERVGELQESFAKSLSVGSAVGLASLDLEHRVASLRETQGRVVERTKQVHARAHEIVDEHEGY----DTIPAVAESPELGRRRQRLREM--LASALDNAGVQGLRERLQAMEGKVDAGVSFQEAEEIVVRIAAAATAAAEAERAALKDGEETRQKEPSDQEIEQIVKEIMRSMEIPA-PSAVATL 276
            M++ LR  RD +  ++S KL  V   AA  LE W  T L   + V  + A    L+  F  +Q  +G LQES AKS SVGS VGL S DL    A L+E Q  +VE+ +QVHA A  ++ EH+ Y    D + A  E     +  + L  M  L   L  A VQ +  RLQ +E +V+A V+ QEAEE+  R AAAA A  E      + G   R  E SD++I ++V+E++ S++ P+ P +  T+
Sbjct:   69 MKEKLRQRRD-SPSISSAKLVSVAGEAAAGLEMW--TSLGGGENVAVVGAG---LVAEFQELQYDMGVLQESLAKSRSVGSVVGLVSWDLNKAQALLKEDQAVLVEQGRQVHALARGVLQEHQEYQGSRDDVRADGEGRSKRQAGEELELMNKLTYGLGEANVQEILGRLQEVESEVNAAVATQEAEEMAARYAAAAEATREQRGGGGRGG---RPAEVSDEDIARVVEEVVLSVDTPSSPDSCVTV 306
[Close]
BLAST of mRNA_F-serratus_M_contig96.20926.1 vs. uniprot
Match: A0A6H5J685_9PHAE (SUN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J685_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 1.890e-17
Identity = 73/189 (38.62%), Postives = 104/189 (55.03%), Query Frame = 0 
Query:   37 MEQHLRWARDLAEMVASEKLHPVVAAAATELESWRETPLVAADIVEDLKAAADQLLTNFDGIQERVGELQESFAKSLSVGSAVGLASLDLEHRVASLRETQGRVVERTKQVHARAHEIVDEHEGYDTIPAVAESPELGRRRQR------LREMLASALDNAGVQGLRERLQAMEGKVDAGVSFQEAEEI 219
            M++ LR  RD +  ++S KL  V   AA  LE W  T L   + V ++ +    LL +F  +Q  +G LQES AKS SVGS VGL S DL    A L+E Q  ++E+ +QVHA A  ++ EH+ Y +    A +   GR +++      L   L   L  A VQ +  RLQ +E +V+A V+ QEAEE+
Sbjct:   63 MKEKLRQRRD-SPSISSAKLVSVAGEAAAGLEMW--TSLGGGENVAEVGSG---LLADFADVQHDIGVLQESLAKSRSVGSVVGLVSWDLNKAQALLKEQQAVLLEQGRQVHALARGVLQEHQEYQSSRDGARADGEGRSKRQAGEELELMNKLTYGLGEANVQEILGRLQELETEVNAAVTTQEAEEM 245
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig96.20926.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LC59_ECTSI4.900e-2238.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J685_9PHAE1.890e-1738.62SUN domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 81..101
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..287
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..15
score: 0.716

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig96contigF-serratus_M_contig96:772965..785302 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig96.20926.1mRNA_F-serratus_M_contig96.20926.1Fucus serratus malemRNAF-serratus_M_contig96 772965..785501 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig96.20926.1 ID=prot_F-serratus_M_contig96.20926.1|Name=mRNA_F-serratus_M_contig96.20926.1|organism=Fucus serratus male|type=polypeptide|length=287bp
MLVSFTLCKVLAVMAVEVWEVVVAVASSRLPEEEDPMEQHLRWARDLAEM
VASEKLHPVVAAAATELESWRETPLVAADIVEDLKAAADQLLTNFDGIQE
RVGELQESFAKSLSVGSAVGLASLDLEHRVASLRETQGRVVERTKQVHAR
AHEIVDEHEGYDTIPAVAESPELGRRRQRLREMLASALDNAGVQGLRERL
QAMEGKVDAGVSFQEAEEIVVRIAAAATAAAEAERAALKDGEETRQKEPS
DQEIEQIVKEIMRSMEIPAPSAVATLKETINKTINRT
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