mRNA_F-serratus_M_contig96.20926.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig96.20926.1
Unique NamemRNA_F-serratus_M_contig96.20926.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig96.20926.1 vs. uniprot
Match: D8LC59_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC59_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 1.670e-21
Identity = 94/247 (38.06%), Postives = 133/247 (53.85%), Query Frame = 1 
Query:  298 MEQHLRWARDLAEMVASEKLHPVVAAAATELESWRETPLVAADIVEDLKAAADQLLTNFDGIQERVGELQESFAKSLSVGSAVGLASLDLEHRVASLRETQGRVVERTKQVHARAHEIVDEHEGY----DTIPAVAESPELGRRRQRLREM--LASALDNAGVQGLRERLQAMEGKVDAGVSFQEAEEIVVRIAAAATAAAEAERAALKDGEETRQKEPSDQEIEQIVKEIMRSMEIPA-PSAVATL 1017
            M++ LR  RD +  ++S KL  V   AA  LE W  T L   + V  + A    L+  F  +Q  +G LQES AKS SVGS VGL S DL    A L+E Q  +VE+ +QVHA A  ++ EH+ Y    D + A  E     +  + L  M  L   L  A VQ +  RLQ +E +V+A V+ QEAEE+  R AAAA A  E      + G   R  E SD++I ++V+E++ S++ P+ P +  T+
Sbjct:   69 MKEKLRQRRD-SPSISSAKLVSVAGEAAAGLEMW--TSLGGGENVAVVGAG---LVAEFQELQYDMGVLQESLAKSRSVGSVVGLVSWDLNKAQALLKEDQAVLVEQGRQVHALARGVLQEHQEYQGSRDDVRADGEGRSKRQAGEELELMNKLTYGLGEANVQEILGRLQEVESEVNAAVATQEAEEMAARYAAAAEATREQRGGGGRGG---RPAEVSDEDIARVVEEVVLSVDTPSSPDSCVTV 306
[Close]
BLAST of mRNA_F-serratus_M_contig96.20926.1 vs. uniprot
Match: A0A6H5J685_9PHAE (SUN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J685_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 3.100e-17
Identity = 83/233 (35.62%), Postives = 120/233 (51.50%), Query Frame = 1 
Query:  172 GWCVVLMLVSFTLCKVLAVMAVEVWEVVVAVASSRLPEEEDP--MEQHLRWARDLAEMVASEKLHPVVAAAATELESWRETPLVAADIVEDLKAAADQLLTNFDGIQERVGELQESFAKSLSVGSAVGLASLDLEHRVASLRETQGRVVERTKQVHARAHEIVDEHEGYDTIPAVAESPELGRRRQR------LREMLASALDNAGVQGLRERLQAMEGKVDAGVSFQEAEEI 846
            GW V+ + V + LC V        W  V  +  + + E      M++ LR  RD +  ++S KL  V   AA  LE W  T L   + V ++ +    LL +F  +Q  +G LQES AKS SVGS VGL S DL    A L+E Q  ++E+ +QVHA A  ++ EH+ Y +    A +   GR +++      L   L   L  A VQ +  RLQ +E +V+A V+ QEAEE+
Sbjct:   26 GWTVLGLAVFWALCLVS-------WWTVRDIRGAWVGESSRAAVMKEKLRQRRD-SPSISSAKLVSVAGEAAAGLEMW--TSLGGGENVAEVGSG---LLADFADVQHDIGVLQESLAKSRSVGSVVGLVSWDLNKAQALLKEQQAVLLEQGRQVHALARGVLQEHQEYQSSRDGARADGEGRSKRQAGEELELMNKLTYGLGEANVQEILGRLQELETEVNAAVTTQEAEEM 245
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig96.20926.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LC59_ECTSI1.670e-2138.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J685_9PHAE3.100e-1735.62SUN domain-containing protein n=1 Tax=Ectocarpus s... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig96contigF-serratus_M_contig96:772965..785501 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Exons6
Model size1050
Cds size861
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932728.8996344-CDS-F-serratus_M_contig96:772964..7730481622932728.8996344-CDS-F-serratus_M_contig96:772964..773048Fucus serratus maleCDSF-serratus_M_contig96 772965..773048 -
1690964444.3617027-CDS-F-serratus_M_contig96:772964..7730481690964444.3617027-CDS-F-serratus_M_contig96:772964..773048Fucus serratus maleCDSF-serratus_M_contig96 772965..773048 -
1622932728.9187536-CDS-F-serratus_M_contig96:773568..7737631622932728.9187536-CDS-F-serratus_M_contig96:773568..773763Fucus serratus maleCDSF-serratus_M_contig96 773569..773763 -
1690964444.3715143-CDS-F-serratus_M_contig96:773568..7737631690964444.3715143-CDS-F-serratus_M_contig96:773568..773763Fucus serratus maleCDSF-serratus_M_contig96 773569..773763 -
1622932728.934053-CDS-F-serratus_M_contig96:774586..7748351622932728.934053-CDS-F-serratus_M_contig96:774586..774835Fucus serratus maleCDSF-serratus_M_contig96 774587..774835 -
1690964444.3810272-CDS-F-serratus_M_contig96:774586..7748351690964444.3810272-CDS-F-serratus_M_contig96:774586..774835Fucus serratus maleCDSF-serratus_M_contig96 774587..774835 -
1622932728.948353-CDS-F-serratus_M_contig96:775303..7754711622932728.948353-CDS-F-serratus_M_contig96:775303..775471Fucus serratus maleCDSF-serratus_M_contig96 775304..775471 -
1690964444.3910978-CDS-F-serratus_M_contig96:775303..7754711690964444.3910978-CDS-F-serratus_M_contig96:775303..775471Fucus serratus maleCDSF-serratus_M_contig96 775304..775471 -
1622932728.967603-CDS-F-serratus_M_contig96:785137..7853021622932728.967603-CDS-F-serratus_M_contig96:785137..785302Fucus serratus maleCDSF-serratus_M_contig96 785138..785302 -
1690964444.4020631-CDS-F-serratus_M_contig96:785137..7853021690964444.4020631-CDS-F-serratus_M_contig96:785137..785302Fucus serratus maleCDSF-serratus_M_contig96 785138..785302 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932728.9840064-UTR-F-serratus_M_contig96:785302..7853221622932728.9840064-UTR-F-serratus_M_contig96:785302..785322Fucus serratus maleUTRF-serratus_M_contig96 785303..785322 -
1690964444.4147544-UTR-F-serratus_M_contig96:785302..7853221690964444.4147544-UTR-F-serratus_M_contig96:785302..785322Fucus serratus maleUTRF-serratus_M_contig96 785303..785322 -
1622932729.002188-UTR-F-serratus_M_contig96:785332..7855011622932729.002188-UTR-F-serratus_M_contig96:785332..785501Fucus serratus maleUTRF-serratus_M_contig96 785333..785501 -
1690964444.428144-UTR-F-serratus_M_contig96:785332..7855011690964444.428144-UTR-F-serratus_M_contig96:785332..785501Fucus serratus maleUTRF-serratus_M_contig96 785333..785501 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig96.20926.1prot_F-serratus_M_contig96.20926.1Fucus serratus malepolypeptideF-serratus_M_contig96 772965..785302 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig96.20926.1

>prot_F-serratus_M_contig96.20926.1 ID=prot_F-serratus_M_contig96.20926.1|Name=mRNA_F-serratus_M_contig96.20926.1|organism=Fucus serratus male|type=polypeptide|length=287bp
MLVSFTLCKVLAVMAVEVWEVVVAVASSRLPEEEDPMEQHLRWARDLAEM
VASEKLHPVVAAAATELESWRETPLVAADIVEDLKAAADQLLTNFDGIQE
RVGELQESFAKSLSVGSAVGLASLDLEHRVASLRETQGRVVERTKQVHAR
AHEIVDEHEGYDTIPAVAESPELGRRRQRLREMLASALDNAGVQGLRERL
QAMEGKVDAGVSFQEAEEIVVRIAAAATAAAEAERAALKDGEETRQKEPS
DQEIEQIVKEIMRSMEIPAPSAVATLKETINKTINRT
back to top

mRNA from alignment at F-serratus_M_contig96:772965..785501-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig96.20926.1 ID=mRNA_F-serratus_M_contig96.20926.1|Name=mRNA_F-serratus_M_contig96.20926.1|organism=Fucus serratus male|type=mRNA|length=12537bp|location=Sequence derived from alignment at F-serratus_M_contig96:772965..785501- (Fucus serratus male)
GTCAACCTGTCCAGGATCCTTGTGCCTGATTAGACGAAGCATCGTGGAGC
ATAATCGGATCTAGTTGACCGATCGAAAAGAGCTTTCCAGAATGACGGAG
TCTGTTGTCCGTAATCTGGCAGCACCCAGATCGTCTCTGTCGGAGCAGGC
CGAGAAGAGCAGGCGTAAGGCGAAGCTAGCCGGATGGTGTGTCGTGCTTA
TGCTCGTGAGCTTTACCTTGTGCAAGGTGTTGGCTGTCATGGCGGTAGAG
GTATGGGAAGTAGTGGTGGCAGTAGCGTCATCTCGTCTGCCTGAGGAAGA
GGATCCCATGGAGCAGCACCTGCGATGGGCGAGGGATCTGGCTGAGATGG
TCGCTTCGGAGAAGGTAGACACTGAGAAAAAGTCGAAATTTACATCAATT
TATTTCCTCAAAATATAGACGATGTGTATGTTATCTTGGTCATCGCATAT
AGCAACGGTAAGGATCAACCGGGTAAGGTTGCTAATCCTGCCCGTGGTCA
GCTGAACAGGGAAAGTGAGTTTTTCCCTTTCCCCGTTCGCGCCTGAGAAT
ATAGTCTCGCGAGACGGGTTTGGCAGTCCCATTACGCGTCAGCCTGCTCA
TCGCTATACTCAGGCTGAATCTGGTGCTTACTTACTGGATTCCTCCCGAG
TTTATTTATTTAAACCGCCATACGCCATCGGGTACTATTAGTCTACCAGT
ACGTAACAGAGCAAAAGAGCTTCACCGACTATTGGAAGCGCGCGCAACAC
ACAGCAAACATTAACGGGGTTGACCGCACTCGCTTTGCTGAGGTGTGACA
GCAACTTTAATGCAGACTCTGTTTGGTAGTATTGTAATCTGTAAACTGGT
AGCTCTTTCTTTCTGTATCCAGTATTAACAGTATTGGCAGAAGGAGGCGG
CATCATCAGAGCGCTTGCTTGGGAAAGAACGGAAGAACGAAAGGCGTGCC
GAGGCGAGGCGGCCGTTATTTGTTATTATTACGCTGCCAATTCCAGTAGA
GCTTACGCTTTAGGTCGAAAAATGGTCTGCAGTCAGAAATCAGTCAGAAA
TAGAAACTTCTTTGAAAATGCGGGGCATGTCTCCTTTTCTTTTTGTCAGC
AGAGACGCAGACAAAACCATGCAAAACCAGTCCACAGGGTACGTCGATCA
AGCGGCCAGCCATTTACTGGAACCATGCGGTCAGCTGGGGTGGGGGGGGC
TGGGTTGGCGTTATATTGGTCGGGTTGGCAAAAAATAGCGATGTTGACTC
GATATTGGTCGGGTTGGTGTTGCGCCGCATTCCTATATATTTCCTGTCAA
CCATTGTTTTCGACCTTAAGCCTAAGCTCGCCTCGCCAATTCGGAGTTCC
AACTGATTGGGTCCTCACACTACTGATGTATGTACCCCGGGACGGGCAAA
CTAACGACTCCAAGTAATCACAACGGCCTAGCTAATACTTCTGTGCAACG
TTGTTGTTGATGATATAGTCTAGATTGGTTATTCACACATACAGGGTATT
GTCCTTGCAACTGGAGAAACTACGGTGACACAACGACAAATCACGTTCCA
GTCAGTTTTGATCAACAAGCCAAGTTTCTCTAGGCTATCTATCACACATG
ATACAGAAAGAAGGAAATTTGAAATACCGAGGTCCATGGTGGTGGAGGCC
TTAAGCTGGTGAAGTCGGCGCGCGAGCCAGCATCCAACCGTCCAAAGCCC
TGTGCATCCCTGAAAAAGCCCCACAAATCTTGCCCCTTCGCCGCTCCTCG
TTGGCCCTCGTAGGAAGAAAATAGACCGTGGTCAGAGATCAGCTTTGCCC
TCAGAAACTTCCCGGTTCGCGCGTTGTATTTTGGTCTCGCGACGTGGGTT
CAGCTGTCCCGCTCCGCGTCGCCCCGCCCATCTTCCTTTCCCGGAGCGAA
TCAGGTGCTTATTCACAGGCTCCTCTCCTCGCTCCCGCTTTCCGCGGCGA
TACGCCAGTCAGTTTTGGTGCCATGACCGTTGGTACGAACGGTCTGGCTT
GTTGATTCAACTGGCAGTGTACCGCCAACGACATCGGATATGCCACTAGC
TGGTCACAGCACGCCTGGACTCCACCGTCATAGTCTCCTCATTCACTTCC
ACGGTTTGGGTCCACCCCGGCCGGGAGGCAGCCGGGGCAGGCCAAGAGGT
CAAAACAATTAATAGGTCATACTTGTAGCGACAACGCGCACGGGTAACCG
TCGACACCAATATGGTACTAAACCACCGTAGTCTGTCTGTACAGTTGGGG
AAAGGGAGGGGAAGGAGGCCATAGGTACATGTACAGTGTAAAGATCGTTC
CCAGGAGACCAGCTAGGGATCTGAAGTCAACTGATTTGCGCCTCATGCGG
TCTCTCGAGTGTTATAACTAACGGTATGGCTATTTGCCCCACCGCCTGGT
TCTCGCGTCAGATGACTTGGTTGGTCACAGTACATGCATGGGTGTGTTAG
GGTTAGGGTTAGCTATCATGGGGTCTATCGTGCAGCCCAAACGGTCCTGT
CTACGTGCTGCCACGGTCGGTGGGGTGGTTGATATTTTCTGGTATGTTTG
GCTATTTGCCCTTACATACCAGAAAACACCAACCACCCCACCGGCCGTAA
CAGCACGTAGACAGGATCGTTTGGGCTGCACGATAGACCCCATGATAGCC
CTGCGACGCGCCAACACACTCATGCACGTACTGTGACCAACCGTGTCTTC
TGGCGCAAGATCTAGGTGGTGGGGTAAAATTGGGAATGGCCCACCGGTGG
GCCAAATAGCCATTTCCTATAACTAATGATGCTTGAAGTTGTAAATGGCT
GGTGCAGCAGGCATCAAAGATATTAAAGATATGACCCTGGCATTAATATA
CTATAATAGCAATACAATTGTACAGTATGTACGTATGTAGACTATATATG
TATGGTCATCACATGTAGCGAGAGTAAGTATCAACGGGTAAGGTTGCCAA
TCCTGCTCGTGGTCAGCTGAACAGGGAAAATGAATATTTCCCTACCCCCG
TTCGCGCCTGAGAATTTCGACTCGCGACACGGGTTCTGCAGTCCTGTCCC
GCATCAGCCTGCTCATCTCCATACTCAGGCTGAACCTGGCCCTTACTCAT
GGGATTCCTCCCGATTTCCGCGGCGGCGGCCATTTATTTATTTAAACCTC
TATACGCTATCGAGTCAGTCCCGAGTTGGTCGAGTCACGCAATTGTGTAC
CGATGGCGTTCGTTCACTGCCGAGAGTCCGACGGCACAGGGCCAGTAGCC
CTCAAGGTAGTTCCAAACGGGTTTTGTCTTGGTAGGTCACCATGGACTAT
GACCAATCATTATGCGCCTCTCTTTTCCACACCCACTATTGGTTTGAAGT
GGTTATTTTGATAGATACTGGTATAGCATGTTGAAAGTACCGGGCAGGTA
TCCTGATCCTCATATACTATCAGTACTGTATCTGTCTATCCACAAATAAA
GATCCCGTGTCGATAGATCGACGCACCTGGCCCTGATGACTCTGGACATG
CCTACAACCATCTGGCATGCACAGCAGGCCCGAACAGCTCAACAGCACAG
CGCCCGCATGGGACATAGGACATGCCTCGCGAGACGAAACAGTGTGGGTG
CTTGGGATGTTTCAAATTGGACGCTTTCAGAGTTTTCTCTAAGACGGACT
CGAGAACAGCGCTACGACAGGCGGGAGGGAGATTGCAGAATCTCATCACT
GGACTACCAGTATAATTTATGAATATCATTCATTTATACTCCGGAGTATA
ATTTATTAATTTCACGATGCACCTCCTATCTCTTACTCATGCTGTCCCAA
ATGTAAGATTTAGTATGAATTGCAAACACCACAAGCGATACTGGTAAGTA
AGTACCGTATAGTAATACTATACTGTCTGTAGGTCAATTTTCTATTATCA
CCTCTGTATCTATAACTTGCAGACTTCCTTCATTGACACCCACCCGATCT
TAGACGTTTTAATGTTGACCCAAACCCCTATAGTTGTATGGTGCGATGGC
ATTATTCATTATTATTGTATGTTATTACTACCTTTCTAGTTATGTACTGT
ATTATCTTTAGTTTTTGTTGCGTTTGGTGACCTGGTATGGCGATTAATGT
CAGTATACCGTGTAACGGTGGGTCTTTCCCCGATATTTTACTGTTACCCA
AGGTTACTACCATTGTGAAACCCATTTAAATGCCATTGGTTCTATTTTTA
GCATATGGAACAACAATTTTATGTAGAATGCCCTTGCGGACTTGTTGTAA
AATGTAAATGCATTTATCTTTACCAATTACAATATTGTAACATTGCTTGT
GTTTTCAACCAAAAGCCCTTACAGGCTGGGCTGGCCAAGACGCTGTACAT
ATGGCGGAATGGGATTTGCCACGCGATTTTTACGAGTTTTCACCAGAAAT
TTTAACACGCGATTAAGACCGCTCTTGCGAAGAGGACCACTTCTACACAT
TTTGGTTTTAGTTTTTTTTCGTAAGTTATGGTATGATAGCTGGATATAAG
TAGATGTGGGAATATTTGTTTCGCGACGAAATGATGGGAAAAATAAAAAT
TAATAAAAATGTGCAGGGGTGGTCCTCTCCGCAAGAGCGATCTAAATCAC
GTGTTAAAAGTTCAGGTGAAAAATCGTAAAAACCGCGTGGCAAATCGCGA
TACCCCCACATTTCCTCAGTTCACTTGTGTTTTGTATCGGAATCTTTACG
AGGCCGCAACTCTTGATAGAAAACGAGGCGAGCCTTGTAACTACCACCTA
CGCTCTTGCGGTGCTCCTGGATACGTGTACACCAATTTTCAGCTTGATCC
GTGACACTTTTTTTCATACTGATTTTAGTATAGGAAGTATCCTCCTCTAC
GCCGCCAATTTGTCATTGTTTACCAAAATCAACTCGGATTCGAAAAATTC
CGGCGCCTGCGCTTTCCTTTTTGCCGTATAGGAGCAGCCTCCAAATTTCA
AGCTTTAACTCGTAGAAACGGCAGAGCGAGACATGAACGAACAGAAGTCA
GTTTCTTGGCCAGCCCAGCTTGTATTGTATAAGGGTCGATGGCACCATTA
CTGCATATTATTACTGTATTAACTATTAACCTATTTGATTATGTTCTAAA
ATGTTTTTGTTTTGTTTTTGTCTGGTGTCGCTGCATGGCGATTAATGTAA
GTGTACAGTGTACAGCATAACGGTGGGTTTCCCCCCGGTATCATAGTGTT
GACCCAATGTTTCTACCATCGGGGAAGAGGTTTTGTATTTGCAGCCGGTG
ATCCCATCTAAACGTGTTGACACTTTCCCCCCTGACTGGGGTACAGTATA
GTACAGTACAGTACAGTACAGTACAGTATGCTATTAACAGAAGGTCTAGA
TGCGTTCAAAATTGCTGTAAAAAATATGTACCCGTATGCGAGTATATTTT
TCTGAGGGTTTGTTTTTCAAGATCCCTGCTACTATATCCTAATTTGACAC
GCGCTTACATCTTTTTCGGTCATAGTCGGGAACAGCGCTGGATTAGTAAT
ATCAGATTAACGATACAGCAGCAGGTTTAGTGCCAATCCAGCCATACAAT
GGTGTACTACTCGTAGATTTGTTCCAAAGTTAGTGTAGCTGGTATTAATA
GCCCCTTTTGCCCTATTGGTCAACAGGGTATACTAGTGTACGAGATGTAG
TCAGTATTGTACCTTGTTTAGGAGAGATGAAGCTGTACGCTTTGCTCTTA
CCTGATGACACTTTCAATACCTGTACCGTTCTACTTGGGGTCAACGTACC
TTTGACCGCTATACTTTTTCGGGCGTTTATGGCATGTCCCCCCCCGGGGC
GTTCTCAGTGAAATACAGGAACTTTTTGAAATCATGCCGCCTCCACGGGC
GAACTGGCACTCGGTCCGTCTATCACCTGTGGACCTTACACCAGCGAGTG
AGATTACTGTGCAGAATGTTTGAAGCTGAACACGATCGAATCTTGATTCT
TTGATTGCTGGATATAAGGAGCGGTCTCGCCACGGTGATCATGAGGACGT
AATACACATGGTAGCATACAAAGTTATGTTTATTTAGTAATGTCCCGAGG
GAGCAGGTCCCCTCGCTACGTGGCGGTCCAGCTGCTGCGTCCCGCACAAC
TCTTTCATCGTCATCTAGGCTCCATCCGGGGGTTCTTCACCCCTTATAGT
AATCAGTAATCATCCCCAACGTCCCGGAGCGTTCTGAGTGTACCTGGGGC
GTTATCTTTAATTTCCCTCGACAGCCTTTGACCCCGTGTGTTCTCGCTGG
TTATGTTCCTAGTTGGATGAACTTGAGCATGCCCGGGGCAATTATAACGG
GGGTGTTCTCCGTCGAGTATAACATTCAGCAGGCTCCCTTACAGTTCCGT
CAAAAGTCAAAAGTCCATAGTTTTGGGTGTTCCAGCAGCCACGAAGGCGT
GCATGCCCAAGCGAAACTCACATGGGGGGCCCAATAGGGGGAAGAATGCG
TTCAAAACCTAGAGACGGAAATGCCACTTTGTAGACCAAGTCTGTACCAA
AAAAAAATGTCTACCGTACCGATGGTCTGATTGTTTAGGCGGCAAAAATA
GTTACAGTCTCGTTTTGCTATTCTCTCCTTAACGAAGCTGTGAGATCTTT
TTGCGTTAGTTTGTAGCCCCCACCCTATTAAAATTACTAAGGGTGGCTTA
CTTGAGGTCGTAAGGCTCCGCTGGTGACCCTTCTAGTTGTGCGAGTCGTT
GGATGTAGATGGACTCCCCAAAAACGAGACTGTCAGAATATGTTGCCCTC
TGGCGAATCAAGCCATTGGTCGAAAAACAGAGGTCATGCTTTTTAAACCC
TCACAGTAACGTCTTGAAGACATTTGGATCAATTATAATTATGTCAATGC
CAACATAAATCTCACGCCACGCCCTTACTCTCTTGACATGAATCAACAAA
CTGCCCATTGTACACCAACATAACTCTGGACCGTCCGCAGAGTAGTACTT
TTAGCAGACTGGGCATCATATCAACCGGGTACGGTCGTGGTGAGCTGAAC
AGAGTAAACACATTTTTCAGTAGACCCGTTCGCGCCTAAGAATTTGGCCT
CGCTAGACGGGTTCGACCATTCCGTCCCGCATCAGCCCGCTTATTTTCCA
CACTATTACACTCTAATAAGTAGTGAATAGTAAAATACGAAGTACAAGGT
ATTATGGTGTAAACCATCACCTCTCCTGTACCAATGCTCTAGCTCCAATA
GTATCGCGGTGTGTGTTTGAGGTCCCCCTAGATCATATGCTAAGCCACTC
CCCCCCTTCGATCAACATTCCCTACCCCTCTCCCCCCAGATAACACGCCG
CAAGGATGTGCAAATCTCGTGCATGTGTTTGGACAAGCCCCGAGAAAATA
AGCTCACCTAGAGCTACAGCTTGTTTACCACACCGGCCTTTAAAAGCTAC
AGCCTCCTCGGGCCGGATTTTGCTACCGTATAGAGTACCAGGTAGACCGG
TAGGGCTCAACGCCAACGCCATTTGCAACTCCCTCCTCGCTCAAAAGCCC
CCCTCCAAAACCCTCATCAGTGTGAACCGGAAGTCCCTCGGAGGCGTTCA
GATGACATTTGTTTAGTGTATTAAACCTAAAGCCGAAGTATGTATGTATG
TATGTGTGGTCGTCACATATAGCAAGAGTATGGATCAACCGGTAAGGTTG
CCAATCCTACTCGTCGTGATCAGCTGAACAGGGAAAATGAATATTCCCCT
GTCTCCGTTCGTGCCTGAGAATTTGGTCTCGCGGGACGGGTTCAGCCGTT
CCGTCCCGCGTCAGCCTGGTCATCTCCATACTCAGGCGGAATCTGGTGCT
TACTTACGGGATTATTCCCGAGTTCCGCGGCGGCGTCCATTTATGAAACC
ACCATACGCCATCGGGTCAGTTCCGAGTTCATCGGGTCACGCAATTGCGT
ACCGATGGCGTTCACTGCCGAAAGTCCGCCGGCACAGGGCCAGTAAACCT
CAAGGTAGTTCCGAACGGGTGCTGCCTTGGCAGGCCACCATGGATCAATT
AATGGTCGCCTCTCTTTCCCACGCCCACTATTGGTATGAAGTGGGCATGT
TTAAAGTAAAGTACAGTACGGCGACCGATGTAGTATGTGAGAGTGAAAAG
CAACACATGCGAACACATCGGGTTGAACCCTAGCACCCGAGGTGGTTTGA
TTTGTTTTGTACTGGCGTGAATTACTGCGCTACTGCTATGAGCTCTGATG
CTGACGGGTGCAAGGGCTGATTGAATAAAGCGGATCGCCTCGCCCGCCAC
CCTCTTAGACTATTAAATAGACGTGTGGTGGCCTGTAGCAATAAACCAAA
CCACGCTCAAACGATGGTTTGGCCTTCAAGATTTCCCTCGCGGAGAAACG
GTGTAAGGGCACAAAAAATCATGGCGGTGCACATAGACACACGCACGAAC
CGTCACGGTGGGAATATTGAACTCGTCGTATAGCAGGTGATCGATCGATC
GTTAAGCAGTAAACCGCGTTTAATTGAGTAGAGCAACTGATGCGTCGGGC
GAGGGACAGGAATCTCCGTTACACAGATGCCCTTTGTCATTAATCGTTAG
TACTATTAATAGTACTATTATTTTGTAGTAATGACAGTATTGTTAATTGT
ATTATTTATTGTATTATTATTAGCATTATCAATAGTATTATCAAAAGACT
TGTGTGTTACTAATTAGAAGTATTGTTAGAGCTACCTGGTATTATCTAAA
GACTTGTGTACTAATAGTATTGTGGAGCTTGCGAGGCCAGTGTGGCCTGC
TGTATTGTTGATCAGATCAATGCCGAAGAGTGGTTTCTTGCTCGAAGTAC
TACTTCTGTACTGTCTGTGCATTGCTTGTGGCAACATCATTCTCCGGTAC
TTTCAACATGCCCACTTCATACCAATAGTGGGTGTGGGAAAGAGAGGCAT
ATATTAATTGGTCCATGGTGACCTGCTAAGGCAGCACTCGTTCGGAACTG
CCTTGAGGTTTACTTGCCCTTTGCCGGTGGACTCTCGGCAGTGAACGCCA
TCGGTACGCAACTGCGTGACCCGATAAACTCGGGACTTACCCGATAGCGT
ATAGCGGTTTAAAATAAATATATGGACGCCGCCGCGGAACTCGGGAGGAA
TCCCGCAAGTAAGCACCAGATTCAGCCTGAGTATGGAGATGAGCAGGCTG
ACGCGAGACGGAACTGCCGAAACCGTTTCGCGAGACCAAATTCTCAGGCA
CGAACGCGGACAGGGGAATATTGATTTTCCCTGTTCAGCTGATCACGACA
AGTAGGATTGGCAACCTTACCGGTTGATCCATACTCTTGCTATATGTGAT
GACTATACATACTTAACCTAAAATGTGTCTCGTTTTTGTTTTGTTTTTAA
TTTCACTTATAGCCGATGGACCTCATCATTACCATCCTGCCTGTGGCCTC
TAAGGATCTTCCCATCTCTCCCCGGGTCACAAGTTCAGTCAACCAAATGG
TTGAATTTTACTTACTCACGTTCCCACGCTTTCCGTTACGGAAGAAAGGT
CTAGGCGCGTTCGCATTTTTCTTTAAACACAAATCCCACTTTGGTAAGAA
TCAAACTCACGACTTCCGCACTGTTACTATTAATAGGAGGTGTGCAGGTT
AGTTACCTACTATTAATAGACCACTCGGGCGACGAAACTAATCCTTTGAA
ATATAATATACGTACTATTCATACCTGTCCGTACCGAATCAAATGACGCC
GTTACTATTACTCTACCAGTAGTATATTCAATTATCTTGGAACATTTTAT
ACACGGAATGGGCCACCTCCAGAGCATTAATATATTAATACATTAGTACA
TTAATACATTACTGTAATACAGTACCTGTAGCTCTGCTTGAAGAAGGTAG
TTGCCGTACAATCTAATGTTAATGTTCCAAACAGACGGACGAAAGCGGAC
CAGATTCTACGAATGTTTTCCACGACCTTCCCGATAAGTTAGACGTGACA
CGGACGTTTTGGTGAATGATGCGATGCATTGCGATGCAAACTCCATGCAT
GCGGCGCTGGGCCCCTGGGAATGGCGGCAGCTGCATCCTGTGGTGGCTGC
CGCTGCGACGGAACTGGAGTCTTGGCGTGAAACGCCCTTGGTGGCGGCAG
ACATTGTGGAGGATCTTAAGGCCGCGGCCGACCAGCTGCTGACAAACTTT
GATGGCATTCAGGAGAGGGTGGGGGAGTTGCAGGAGAGCTTCGCCAAGGT
AGGTTGGGTGGAAAGGGATTGGAATATGACATCTGGAGCGATAAGGTCAC
AAAGGGATACTCAAATCTACTACACTTAACAATAGTCGTATATTTATTAT
TATATTAGCTCTAGTACCCCCCAAAATAATATGTAGAGCAAAAAGAGCCG
TAGAGCTGCTACAGGTATCATGCTCTCCCTGGTATAGATAGGAACAAAAC
TTGTAATATTATAGTACAACCAATCCGTTTCCGATTTAAAAATGGAAACA
AAAAAAGCGTTACGTTACGTTACGTTACGTTAACAATTTCGTGGTGGTGG
CCTCCACCTAACTCTGCGTTAAGATGGGAGGGTAAAGCAGGAGGTGCTTG
TGTGTAAGAGAGAACGAAAGTGTACTTTTAAACCACCGCTGTGCCTCTAC
GCTCGTGCTTTCCTTGCTTCACGGCGGGTATGGGACGGGATGAAATCACA
TGCCTAACGACAAAAGTCGTTATCCGTCGGGAGTGCCGTCGGACTGGCCT
CCCTCGATCTCGAGCACCGCGTGGCTTCCCTGAGGGAGACCCAGGGCAGG
GTCGTGGAGCGGACCAAGCAGGTGCACGCTCGGGCCCACGAGATTGTGGA
CGAGCACGAAGGTTACGATACAATTCCGGCTGTCGCCGAAAGTCCGGAGC
TGGGACGGAGGCGCCAGAGGCTGAGGGAGATGCTCGCGAGCGCCCTGGAC
AATGCTGGCGTACAGGTGCAACTGAAAAACAGCCTCAATACCCCGCATTG
GCGTAGTTCTTTTGGATCGGCTTTGAAGCGGCGCGCTATAGTGTGTCATA
GTACTTTGCTTTGATCACGCCTTGAAAAGAGACAGGAAAATGGGGGGTTT
TGTACGGGGAATGGATGTTTCTCGCTCGGTGTCTCGCGCGTGAGCATTGT
GTTCTCAGTCTTCTCCCCCCCCCCCCCAAGAGCTTACACGCCTCCATTGA
CGAGAACCTCCCATCCCGACGACTCGCAAATTTCAATTTTTCGTTTCCGT
TCGTGAGAGTGAGAGGGTGTCAAGGTACTGACTGCTATGTACTGCTGTAT
ACTTCATACCTGAAAATGCCCTGAAAATGCTCCTGAACAATGGCACTCGC
AAAAGAAATAAATGGGGACAATGGATTGCGACGTTGTAGAGATCAATATC
GCGAAAGAGGAAAGGAGTTTGCTGACGTTATTAATGGCTATTTTAACTTC
ATTGTATTTTAGTTTTGTTGTAATTTAATTTTGTTTTATTTAACTTTTTG
TATTTTGACTTTTTATGTTTTAGCTTCATATTATTTATTTTTTCACACGT
TTTTACTTTATTTTATTTTATCTCATGTTATTTTATTTCCTTTTACTTGC
TCTGTTTCAATATGTTTTTAGTTTAAATTTTATTTCATGGAATTTCAATT
TACCTTACTGTATTTCATTTTATTTTGTTTCATTCAATTCACGTTGATTT
GTTTCGTTCTTTCAGCACTTTATTTTTGTTTTATTTTATTTGATATGAAT
ATTTCATTTCAAGATTTGCTTTCGTTGACATTATACAGGGCCTGAGAGAG
CGCCTCCAGGCGATGGAGGGCAAGGTTGATGCTGGCGTGAGCTTCCAAGA
GGCTGAGGAGATTGTCGTTCGGATCGCTGCTGCTGCTACTGCTGCTGCTG
AAGCAGAGAGAGCGGCCCTGAAGGATGGCGAAGAGACCCGACAGAAGGAG
CCAAGCGACCAGGAGATCGAACAGATCGTGAAGGTGAAGCGGCATGTATG
GAGGCGTTCGTGCGATCCCCGGAGGCAGGGAGTAGGGAGGGGGAGGGGGA
TGAAGAGTGTTGTCCCCGTCCACCTGTCCCTTTTCGGGGTTGAGTAGACT
ATTAATAGAGTATTAATATAGGTATTGTCCTCAAGAAAGAGGGAAACCTT
TTGTTTTGGGCGGGGCAATCGGGCCAAAACGTCCCTCGCGAATATATTAA
CACGCTTTGATACATTTTCACAATTTCATACCAGTATGCCCTACCGGGGA
TGATGGAAGCTTCTTCCCCTCGCCCCCCCCCGGCGCAGTTGTAGAGCGAT
AGAGCGATTGTTACATTCTTACACACCTCCTTCCATTCCTATTAATGATC
ATTTCTGTGGCGTCGCTTGCACCTCTTCCTAGTTGCTTTTAGACAAATGT
TTTATGCTGTATTATATATGTATGCGTATATTATAGGCTACGTACTTGGC
TATAACTGTTAGTGTCACGTGGCGGTTGAATCGGACTGCTGTCGCTGTGG
CAGGAGATCATGCGGTCGATGGAGATCCCCGCACCTTCGGCGGTGGCGAC
ATTGAAGGAGACTATTAATAAGACTATTAATAGGACT
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig96:772965..785501-

>mRNA_F-serratus_M_contig96.20926.1 ID=mRNA_F-serratus_M_contig96.20926.1|Name=mRNA_F-serratus_M_contig96.20926.1|organism=Fucus serratus male|type=CDS|length=1722bp|location=Sequence derived from alignment at F-serratus_M_contig96:772965..785501- (Fucus serratus male)
ATGCTCGTGAGCTTTACCTTGTGCAAGGTGTTGGCTGTCATGGCGGTAGA
GGTATGGGAAGTAGTGGTGGCAGTAGCGTCATCTCGTCTGCCTGAGGAAG
AGGATCCCATGGAGCAGCACCTGCGATGGGCGAGGGATCTGGCTGAGATG
GTCGCTTCGGAGAAGATGCTCGTGAGCTTTACCTTGTGCAAGGTGTTGGC
TGTCATGGCGGTAGAGGTATGGGAAGTAGTGGTGGCAGTAGCGTCATCTC
GTCTGCCTGAGGAAGAGGATCCCATGGAGCAGCACCTGCGATGGGCGAGG
GATCTGGCTGAGATGGTCGCTTCGGAGAAGCTGCATCCTGTGGTGGCTGC
CGCTGCGACGGAACTGGAGTCTTGGCGTGAAACGCCCTTGGTGGCGGCAG
ACATTGTGGAGGATCTTAAGGCCGCGGCCGACCAGCTGCTGACAAACTTT
GATGGCATTCAGGAGAGGGTGGGGGAGTTGCAGGAGAGCTTCGCCAAGCT
GCATCCTGTGGTGGCTGCCGCTGCGACGGAACTGGAGTCTTGGCGTGAAA
CGCCCTTGGTGGCGGCAGACATTGTGGAGGATCTTAAGGCCGCGGCCGAC
CAGCTGCTGACAAACTTTGATGGCATTCAGGAGAGGGTGGGGGAGTTGCA
GGAGAGCTTCGCCAAGTCGTTATCCGTCGGGAGTGCCGTCGGACTGGCCT
CCCTCGATCTCGAGCACCGCGTGGCTTCCCTGAGGGAGACCCAGGGCAGG
GTCGTGGAGCGGACCAAGCAGGTGCACGCTCGGGCCCACGAGATTGTGGA
CGAGCACGAAGGTTACGATACAATTCCGGCTGTCGCCGAAAGTCCGGAGC
TGGGACGGAGGCGCCAGAGGCTGAGGGAGATGCTCGCGAGCGCCCTGGAC
AATGCTGGCGTACAGTCGTTATCCGTCGGGAGTGCCGTCGGACTGGCCTC
CCTCGATCTCGAGCACCGCGTGGCTTCCCTGAGGGAGACCCAGGGCAGGG
TCGTGGAGCGGACCAAGCAGGTGCACGCTCGGGCCCACGAGATTGTGGAC
GAGCACGAAGGTTACGATACAATTCCGGCTGTCGCCGAAAGTCCGGAGCT
GGGACGGAGGCGCCAGAGGCTGAGGGAGATGCTCGCGAGCGCCCTGGACA
ATGCTGGCGTACAGGGCCTGAGAGAGCGCCTCCAGGCGATGGAGGGCAAG
GTTGATGCTGGCGTGAGCTTCCAAGAGGCTGAGGAGATTGTCGTTCGGAT
CGCTGCTGCTGCTACTGCTGCTGCTGAAGCAGAGAGAGCGGCCCTGAAGG
ATGGCGAAGAGACCCGACAGAAGGAGCCAAGCGACCAGGAGATCGAACAG
ATCGTGAAGGGCCTGAGAGAGCGCCTCCAGGCGATGGAGGGCAAGGTTGA
TGCTGGCGTGAGCTTCCAAGAGGCTGAGGAGATTGTCGTTCGGATCGCTG
CTGCTGCTACTGCTGCTGCTGAAGCAGAGAGAGCGGCCCTGAAGGATGGC
GAAGAGACCCGACAGAAGGAGCCAAGCGACCAGGAGATCGAACAGATCGT
GAAGGAGATCATGCGGTCGATGGAGATCCCCGCACCTTCGGCGGTGGCGA
CATTGAAGGAGACTATTAATAAGACTATTAATAGGACTGAGATCATGCGG
TCGATGGAGATCCCCGCACCTTCGGCGGTGGCGACATTGAAGGAGACTAT
TAATAAGACTATTAATAGGACT
back to top