prot_F-serratus_M_contig96.20920.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig96.20920.1
Unique Nameprot_F-serratus_M_contig96.20920.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length702
Homology
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BLAST of mRNA_F-serratus_M_contig96.20920.1 vs. uniprot
Match: D8LC61_ECTSI (Putative copper transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC61_ECTSI)

HSP 1 Score: 218 bits (555), Expect = 4.640e-57
Identity = 109/159 (68.55%), Postives = 130/159 (81.76%), Query Frame = 0 
Query:  537 QSQTYISLSVKGMMCMESCGQTVQQALDDVPGVRSVTVHFPTRTASVQVEPGANVTVTDLTTKLEVIGFESKCIATSTSEEPILEEANVNAVWAIASALGLVDRGCAMAWGDACNCXXXXXXVNCPQHMKKVSHAVDLVLKAVDLSSSKSPLPSPKGKP 695
            Q+ ++ISLSV GMMCME+CGQTVQQAL  VPGV SVT+HFPTRTAS++V+  ANVT+ DLT+ L+ IGF S C+AT+T++EP LE+  VNAVWAIA+ALGLVD GCAMAWG  C+C      +NCPQHMKKVSHAVDLVL+A DLSSSK+P   PK KP
Sbjct:  674 QTSSFISLSVSGMMCMENCGQTVQQALKKVPGVLSVTIHFPTRTASIKVDAKANVTLGDLTSALDAIGFGSSCVATTTTQEPTLEQDGVNAVWAIANALGLVDPGCAMAWGRPCSCGDDCRCINCPQHMKKVSHAVDLVLQAADLSSSKAPPEEPKPKP 832
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BLAST of mRNA_F-serratus_M_contig96.20920.1 vs. uniprot
Match: A0A6H5KKC5_9PHAE (HMA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKC5_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 3.600e-30
Identity = 68/100 (68.00%), Postives = 86/100 (86.00%), Query Frame = 0 
Query:  537 QSQTYISLSVKGMMCMESCGQTVQQALDDVPGVRSVTVHFPTRTASVQVEPGANVTVTDLTTKLEVIGFESKCIATSTSEEPILEEANVNAVWAIASALG 636
            Q+ ++ISLSV GMMCME+CGQTVQQAL  VPGV SVT+HFPTRTAS++V+  ANVT+ DLT+ L+ IGF+S C+AT+T++EP LE+  VNAVWAIA+ALG
Sbjct:  818 QTSSFISLSVSGMMCMENCGQTVQQALKKVPGVLSVTIHFPTRTASIKVDTEANVTLGDLTSALDAIGFDSSCVATTTAQEPTLEQDGVNAVWAIANALG 917
[Close]
BLAST of mRNA_F-serratus_M_contig96.20920.1 vs. uniprot
Match: A0A836CMV3_9STRA (HMA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMV3_9STRA)

HSP 1 Score: 116 bits (290), Expect = 5.780e-23
Identity = 69/173 (39.88%), Postives = 90/173 (52.02%), Query Frame = 0 
Query:  540 TYISLSVKGMMCMESCGQTVQQALDDVPGVRSVTVHFPTRTASVQVEPGANVTVTDLTTKLEVIGFESKCIATS-----------------------------------------------TSEEPILEEANVNAVWAIASALGLVDRGCAMAWGDACNCXXXXXX-VNCPQH 664
            TY+SL+V+GMMCM  CG+TV++ L  VPGV +V+VHFPTRTASVQV+P +   +  L  +LE +GF++ CI+                                                 TSEEP++ ++  NAVWAIA  LGLVDRGC M+WG AC C        NC  H
Sbjct: 1062 TYVSLAVEGMMCMRDCGETVRRCLAGVPGVVTVSVHFPTRTASVQVDPASGAGIETLVERLEAVGFQATCISRCAVDMQSMCRVMRNVRSSQGTLRVLQSIXXXXXXXXXXXXXXXXXXXXTSEEPMVAQSE-NAVWAIAEVLGLVDRGCPMSWGGACACDPDKCRCTNCDVH 1233
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig96.20920.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LC61_ECTSI4.640e-5768.55Putative copper transporter n=1 Tax=Ectocarpus sil... [more]
A0A6H5KKC5_9PHAE3.600e-3068.00HMA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CMV3_9STRA5.780e-2339.88HMA domain-containing protein n=1 Tax=Tribonema mi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006121Heavy metal-associated domain, HMAPFAMPF00403HMAcoord: 544..606
e-value: 6.5E-7
score: 29.7
IPR006121Heavy metal-associated domain, HMAPROSITEPS50846HMA_2coord: 541..609
score: 14.371
NoneNo IPR availableGENE3D3.30.70.100coord: 541..612
e-value: 1.2E-13
score: 53.2
IPR036163Heavy metal-associated domain superfamilySUPERFAMILY55008HMA, heavy metal-associated domaincoord: 539..608

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig96contigF-serratus_M_contig96:637338..640804 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig96.20920.1mRNA_F-serratus_M_contig96.20920.1Fucus serratus malemRNAF-serratus_M_contig96 637219..641737 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig96.20920.1 ID=prot_F-serratus_M_contig96.20920.1|Name=mRNA_F-serratus_M_contig96.20920.1|organism=Fucus serratus male|type=polypeptide|length=702bp
MTSAQSGAGVLCIKHGGGKRCLVPGCQKLVRKSNRCTKHASQVSEIATPS
AVEAPIVPTAAPSSTVDHTGEERLPSPEPQPPLSPEKPAEEPVVPQSQAS
GIMSGNPVSERGALERDRAPALALPLADIGRRTGSCSPPLPSIASMNIVG
PLPAPRATEALEDFRNMEKPVVSFKAIPPLSTSLGLTSSIADRPTPLLPV
PSLHHLDHRVKGAVSGPLLQKSIRSPKGPSTIAAGVTSSPEMARGFQQPL
PRFDAIESSPNQDRVAFRLERVRSLTGSLAGAVEDPPQPPHVSTAYRFFS
PGGKALAGSLPEERASNRCDSVAALGLCRLAQSDRYRDDHQSERSYSVVV
APPPRNHSPYLLRPPPMAERMTVIAAPTRVENGGGDGGGSDVAQGWSQHY
LHEVPGAQDRNGQLENPSGACIRTGAAPGDFPPTPPPLDIAGAERRAIAP
SPDSTSCGNASPFVVKALLETSPGDDPAAIQATVEGILPPDVRSQPYCSQ
YPSSGVGGVTQEGFSSGSVTDAGSDGVRTSSPGSTSQSQTYISLSVKGMM
CMESCGQTVQQALDDVPGVRSVTVHFPTRTASVQVEPGANVTVTDLTTKL
EVIGFESKCIATSTSEEPILEEANVNAVWAIASALGLVDRGCAMAWGDAC
NCGDSCNCVNCPQHMKKVSHAVDLVLKAVDLSSSKSPLPSPKGKPCPITT
K*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006121HMA_dom
IPR036163HMA_dom_sf