prot_F-serratus_M_contig96.20914.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig96.20914.1
Unique Nameprot_F-serratus_M_contig96.20914.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length163
Homology
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BLAST of mRNA_F-serratus_M_contig96.20914.1 vs. uniprot
Match: A0A673YAH7_SALTR (Ubiquitin C n=1 Tax=Salmo trutta TaxID=8032 RepID=A0A673YAH7_SALTR)

HSP 1 Score: 302 bits (774), Expect = 2.160e-103
Identity = 155/163 (95.09%), Postives = 159/163 (97.55%), Query Frame = 0 
Query:    1 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 163
            MQIFVKTLTGKTITL+VEPSDTI+ VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VEPSDTI+ VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 163
[Close]
BLAST of mRNA_F-serratus_M_contig96.20914.1 vs. uniprot
Match: A0A4Z2DA57_SCHJA (Polyubiquitin-B isoform 2 n=1 Tax=Schistosoma japonicum TaxID=6182 RepID=A0A4Z2DA57_SCHJA)

HSP 1 Score: 302 bits (774), Expect = 2.240e-103
Identity = 155/163 (95.09%), Postives = 159/163 (97.55%), Query Frame = 0 
Query:    1 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 163
            MQIFVKTLTGKTITL+VEPSDTI+ VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VEPSDTI+ VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 163
[Close]
BLAST of mRNA_F-serratus_M_contig96.20914.1 vs. uniprot
Match: A0A2G8KC12_STIJA (Ubiquitin n=2 Tax=Eukaryota TaxID=2759 RepID=A0A2G8KC12_STIJA)

HSP 1 Score: 303 bits (776), Expect = 2.550e-103
Identity = 155/163 (95.09%), Postives = 159/163 (97.55%), Query Frame = 0 
Query:    1 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 163
            MQIFVKTLTGKTITL+VEPSDTI+ VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VEPSDTI+ VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 163
[Close]
BLAST of mRNA_F-serratus_M_contig96.20914.1 vs. uniprot
Match: A0A670KIW3_PODMU (Ubiquitin B n=1 Tax=Podarcis muralis TaxID=64176 RepID=A0A670KIW3_PODMU)

HSP 1 Score: 302 bits (774), Expect = 2.570e-103
Identity = 155/163 (95.09%), Postives = 159/163 (97.55%), Query Frame = 0 
Query:    1 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 163
            MQIFVKTLTGKTITL+VEPSDTI+ VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VEPSDTI+ VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 163
[Close]
BLAST of mRNA_F-serratus_M_contig96.20914.1 vs. uniprot
Match: A0A818TMV2_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A818TMV2_9BILA)

HSP 1 Score: 302 bits (774), Expect = 2.760e-103
Identity = 155/163 (95.09%), Postives = 159/163 (97.55%), Query Frame = 0 
Query:    1 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 163
            MQIFVKTLTGKTITL+VEPSDTI+ VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VEPSDTI+ VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 163
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig96.20914.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A673YAH7_SALTR2.160e-10395.09Ubiquitin C n=1 Tax=Salmo trutta TaxID=8032 RepID=... [more]
A0A4Z2DA57_SCHJA2.240e-10395.09Polyubiquitin-B isoform 2 n=1 Tax=Schistosoma japo... [more]
A0A2G8KC12_STIJA2.550e-10395.09Ubiquitin n=2 Tax=Eukaryota TaxID=2759 RepID=A0A2G... [more]
A0A670KIW3_PODMU2.570e-10395.09Ubiquitin B n=1 Tax=Podarcis muralis TaxID=64176 R... [more]
A0A818TMV2_9BILA2.760e-10395.09Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019956UbiquitinPRINTSPR00348UBIQUITINcoord: 11..31
score: 74.16
coord: 53..74
score: 92.03
coord: 32..52
score: 95.05
IPR000626Ubiquitin domainSMARTSM00213ubq_7coord: 1..72
e-value: 2.9E-35
score: 133.1
coord: 77..148
e-value: 2.9E-35
score: 133.1
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 3..74
e-value: 1.7E-33
score: 114.1
coord: 79..150
e-value: 1.7E-33
score: 114.1
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 77..152
score: 30.67
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 1..76
score: 30.67
NoneNo IPR availableGENE3D3.10.20.90coord: 77..154
e-value: 5.6E-46
score: 156.7
coord: 1..76
e-value: 1.5E-45
score: 155.3
NoneNo IPR availablePANTHERPTHR10666:SF336POLYUBIQUITIN 10-RELATEDcoord: 71..163
NoneNo IPR availablePANTHERPTHR10666UBIQUITINcoord: 1..103
NoneNo IPR availablePANTHERPTHR10666:SF336POLYUBIQUITIN 10-RELATEDcoord: 1..103
NoneNo IPR availablePANTHERPTHR10666UBIQUITINcoord: 71..163
IPR019954Ubiquitin conserved sitePROSITEPS00299UBIQUITIN_1coord: 27..52
IPR019954Ubiquitin conserved sitePROSITEPS00299UBIQUITIN_1coord: 103..128
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 76..152
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 1..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig96contigF-serratus_M_contig96:327724..328212 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig96.20914.1mRNA_F-serratus_M_contig96.20914.1Fucus serratus malemRNAF-serratus_M_contig96 327207..328212 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig96.20914.1 ID=prot_F-serratus_M_contig96.20914.1|Name=mRNA_F-serratus_M_contig96.20914.1|organism=Fucus serratus male|type=polypeptide|length=163bp
MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQL
EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID
GVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR
GGMQIFVKTLTGK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019956Ubiquitin
IPR000626Ubiquitin_dom
IPR019954Ubiquitin_CS
IPR029071Ubiquitin-like_domsf