mRNA_F-serratus_M_contig96.20914.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig96.20914.1
Unique NamemRNA_F-serratus_M_contig96.20914.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig96.20914.1 vs. uniprot
Match: F0YAA4_AURAN (Polyubiquitin n=9 Tax=Stramenopiles TaxID=33634 RepID=F0YAA4_AURAN)

HSP 1 Score: 456 bits (1173), Expect = 3.210e-159
Identity = 235/238 (98.74%), Postives = 235/238 (98.74%), Query Frame = 2 
Query:  293 QIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 1006
            QIFVKTLTGKTITLDVEPSDTID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct:    2 QIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 239
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BLAST of mRNA_F-serratus_M_contig96.20914.1 vs. uniprot
Match: A0A836CJQ4_9STRA (Polyubiquitin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJQ4_9STRA)

HSP 1 Score: 456 bits (1173), Expect = 9.390e-159
Identity = 235/238 (98.74%), Postives = 235/238 (98.74%), Query Frame = 2 
Query:  293 QIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 1006
            QIFVKTLTGKTITLDVEPSDTID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct:   32 QIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 269
[Close]
BLAST of mRNA_F-serratus_M_contig96.20914.1 vs. uniprot
Match: A0A835ZEZ7_9STRA (Ubiquitin-related domain-containing protein n=4 Tax=Eukaryota TaxID=2759 RepID=A0A835ZEZ7_9STRA)

HSP 1 Score: 456 bits (1173), Expect = 6.090e-158
Identity = 235/238 (98.74%), Postives = 235/238 (98.74%), Query Frame = 2 
Query:  293 QIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 1006
            QIFVKTLTGKTITLDVEPSDTID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct:    2 QIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 239
[Close]
BLAST of mRNA_F-serratus_M_contig96.20914.1 vs. uniprot
Match: D7FWC9_ECTSI (Similar to ubiquitin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWC9_ECTSI)

HSP 1 Score: 463 bits (1191), Expect = 1.800e-157
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 2 
Query:  293 QIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 1006
            QIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct:    2 QIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 239
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BLAST of mRNA_F-serratus_M_contig96.20914.1 vs. uniprot
Match: D8LC68_ECTSI (Uncharacterized protein n=3 Tax=Eukaryota TaxID=2759 RepID=D8LC68_ECTSI)

HSP 1 Score: 452 bits (1163), Expect = 1.520e-156
Identity = 237/253 (93.68%), Postives = 239/253 (94.47%), Query Frame = 2 
Query:  290 RQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK--------------ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 1006
            ++IFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK              ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct:   62 QKIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKXXXXXXXXXXXXXKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 314
[Close]
BLAST of mRNA_F-serratus_M_contig96.20914.1 vs. uniprot
Match: H3G9R0_PHYRM (Uncharacterized protein n=4 Tax=Oomycota TaxID=4762 RepID=H3G9R0_PHYRM)

HSP 1 Score: 451 bits (1161), Expect = 3.180e-156
Identity = 232/238 (97.48%), Postives = 235/238 (98.74%), Query Frame = 2 
Query:  293 QIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 1006
            QIFVKTLTGKTITLDVEPSD+ID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSD+ID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSD+ID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct:    2 QIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 239
[Close]
BLAST of mRNA_F-serratus_M_contig96.20914.1 vs. uniprot
Match: M9NZH2_PARCA (Polyubiquitin (Fragment) n=1 Tax=Paramecium caudatum TaxID=5885 RepID=M9NZH2_PARCA)

HSP 1 Score: 447 bits (1149), Expect = 3.290e-156
Identity = 231/238 (97.06%), Postives = 231/238 (97.06%), Query Frame = 2 
Query:  293 QIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 1006
            QIFVKTLTGKTITLDVEPSD ID VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct:    2 QIFVKTLTGKTITLDVEPSDIIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 239
[Close]
BLAST of mRNA_F-serratus_M_contig96.20914.1 vs. uniprot
Match: A0A286UR30_9AGAM (Polyubiquitin n=1 Tax=Pyrrhoderma noxium TaxID=2282107 RepID=A0A286UR30_9AGAM)

HSP 1 Score: 449 bits (1155), Expect = 4.140e-156
Identity = 232/238 (97.48%), Postives = 235/238 (98.74%), Query Frame = 2 
Query:  293 QIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 1006
            QIFVKTLTGKTITL+VE SDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VE SDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VE SDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct:    2 QIFVKTLTGKTITLEVESSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 239
[Close]
BLAST of mRNA_F-serratus_M_contig96.20914.1 vs. uniprot
Match: B7FZS1_PHATC (Predicted protein n=16 Tax=Eukaryota TaxID=2759 RepID=B7FZS1_PHATC)

HSP 1 Score: 449 bits (1155), Expect = 2.590e-155
Identity = 232/238 (97.48%), Postives = 232/238 (97.48%), Query Frame = 2 
Query:  293 QIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 1006
            QIFVKTLTGKTITLDVEPSDTID VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct:    2 QIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 239
[Close]
BLAST of mRNA_F-serratus_M_contig96.20914.1 vs. uniprot
Match: A0A817CFU6_9BILA (Hypothetical protein n=2 Tax=Bilateria TaxID=33213 RepID=A0A817CFU6_9BILA)

HSP 1 Score: 444 bits (1143), Expect = 9.840e-155
Identity = 229/238 (96.22%), Postives = 232/238 (97.48%), Query Frame = 2 
Query:  293 QIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 1006
            QIFVKTLTGKTITL+VEPSDTID VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VEPSDTID VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VEPSDTID VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct:    2 QIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 239
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig96.20914.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F0YAA4_AURAN3.210e-15998.74Polyubiquitin n=9 Tax=Stramenopiles TaxID=33634 Re... [more]
A0A836CJQ4_9STRA9.390e-15998.74Polyubiquitin n=1 Tax=Tribonema minus TaxID=303371... [more]
A0A835ZEZ7_9STRA6.090e-15898.74Ubiquitin-related domain-containing protein n=4 Ta... [more]
D7FWC9_ECTSI1.800e-157100.00Similar to ubiquitin n=2 Tax=Ectocarpus TaxID=2879... [more]
D8LC68_ECTSI1.520e-15693.68Uncharacterized protein n=3 Tax=Eukaryota TaxID=27... [more]
H3G9R0_PHYRM3.180e-15697.48Uncharacterized protein n=4 Tax=Oomycota TaxID=476... [more]
M9NZH2_PARCA3.290e-15697.06Polyubiquitin (Fragment) n=1 Tax=Paramecium caudat... [more]
A0A286UR30_9AGAM4.140e-15697.48Polyubiquitin n=1 Tax=Pyrrhoderma noxium TaxID=228... [more]
B7FZS1_PHATC2.590e-15597.48Predicted protein n=16 Tax=Eukaryota TaxID=2759 Re... [more]
A0A817CFU6_9BILA9.840e-15596.22Hypothetical protein n=2 Tax=Bilateria TaxID=33213... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig96contigF-serratus_M_contig96:327207..328212 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score321.2
Seed ortholog evalue2.7e-85
Seed eggNOG ortholog2880.D7FWC9
Preferred nameUBC
KEGG koko:K02927,ko:K04551,ko:K08770,ko:K12158
KEGG Pathwayko03010,ko03320,ko04137,ko04144,ko05012,ko05167,map03010,map03320,map04137,map04144,map05012,map05167
KEGG ModuleM00177,M00179
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0031386,GO:0032446,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0045116,GO:0070647,GO:0071704,GO:1901564
EggNOG free text desc.ubiquitin
EggNOG OGsCOG5272@1,KOG0001@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011,ko04121,ko04147
Exons1
Model size1006
Cds size489
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932726.379428-UTR-F-serratus_M_contig96:327206..3277231622932726.379428-UTR-F-serratus_M_contig96:327206..327723Fucus serratus maleUTRF-serratus_M_contig96 327207..327723 +
1690964442.9712603-UTR-F-serratus_M_contig96:327206..3277231690964442.9712603-UTR-F-serratus_M_contig96:327206..327723Fucus serratus maleUTRF-serratus_M_contig96 327207..327723 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932726.3969836-CDS-F-serratus_M_contig96:327723..3282121622932726.3969836-CDS-F-serratus_M_contig96:327723..328212Fucus serratus maleCDSF-serratus_M_contig96 327724..328212 +
1690964442.9846983-CDS-F-serratus_M_contig96:327723..3282121690964442.9846983-CDS-F-serratus_M_contig96:327723..328212Fucus serratus maleCDSF-serratus_M_contig96 327724..328212 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig96.20914.1prot_F-serratus_M_contig96.20914.1Fucus serratus malepolypeptideF-serratus_M_contig96 327724..328212 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig96.20914.1

>prot_F-serratus_M_contig96.20914.1 ID=prot_F-serratus_M_contig96.20914.1|Name=mRNA_F-serratus_M_contig96.20914.1|organism=Fucus serratus male|type=polypeptide|length=163bp
MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQL
EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID
GVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR
GGMQIFVKTLTGK
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mRNA from alignment at F-serratus_M_contig96:327207..328212+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig96.20914.1 ID=mRNA_F-serratus_M_contig96.20914.1|Name=mRNA_F-serratus_M_contig96.20914.1|organism=Fucus serratus male|type=mRNA|length=1006bp|location=Sequence derived from alignment at F-serratus_M_contig96:327207..328212+ (Fucus serratus male)
GTGCTGAGATTCGTAACCAAGGCCCAAACTTATTACATGCGGGGTACTAA
GGCGTCAAATACCTGGAACCAGATTCAGCCTGGTTGTAGAGAACGTGCTA
ACCCTGGACAGAGGGCCAAGCCGGTTGCCTCATGTCCCACTGGTATATGT
GATCACCACACATTCATAAATAAATGCGAGGTTCAGCATCTGAGGAAAAA
TAATTTTAAAAATCGTACACGCACATTAAATCCTAAAACCCTCTGAATGC
TCAACGCTCGGATGGAAATCCCCTTACGTCATATTCGCGCGCCAGATTTT
TGTCAAGACACTCACGGGTAAGACAATCACCCTCGACGTTGAGCCGTCCG
ACACCATCGATGGCGTGAAGCAGAAGATCCAGGACAAGGAGGGTATCCCT
CCGGACCAACAGCGCCTGATCTTCGCGGGCAAGCAACTGGAGGACGGCCG
CACCCTATCGGACTACAACATCCAGAAAGAGTCCACTCTCCACCTGGTGC
TCCGCCTCCGCGGTGGCATGCAGATCTTCGTTAAGACCCTGACGGGGAAG
ACGATCACTCTGGACGTGGAGCCGTCCGACACGATCGACGGGGTGAAGCA
GAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATCT
TCGCGGGCAAGCAGCTGGAGGACGGCCGCACCCTGTCGGACTACAACATC
CAAAAGGAGTCCACTCTTCATTTGGTGCTCCGCCTCCGCGGCGGCATGCA
GATCTTCGTGAAGACCTTGACGGGTAAGACGATCACTCTGGACGTGGAGC
CGTCCGACACGATCGATGGCGTGAAACAGAAGATTCAGGACAAGGAGGGC
ATTCCCCCGGACCAACAGCGCCTGATCTTCGCGGGCAAGCAGCTGGAGGA
CGGCCGCACCCTGTCGGACTACAACATCCAGAAGGAGTCCACTCTCCACC
TGGTGCTCCGCCTCCGCGGCGGCATGCAGATCTTCGTGAAGACCTTGACG
GGTAAG
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Coding sequence (CDS) from alignment at F-serratus_M_contig96:327207..328212+

>mRNA_F-serratus_M_contig96.20914.1 ID=mRNA_F-serratus_M_contig96.20914.1|Name=mRNA_F-serratus_M_contig96.20914.1|organism=Fucus serratus male|type=CDS|length=978bp|location=Sequence derived from alignment at F-serratus_M_contig96:327207..328212+ (Fucus serratus male)
ATGCAGATCTTCGTTAAGACCCTGACGGGGAAGACGATCACTCTGGACGT
GGAGCCGTCCGACACGATCGACGGGGTGAAGCAGAAGATCCAGGACAAGG
AGGGCATTCCCCCGGACCAGCAGCGCCTGATCTTCGCGGGCAAGCAGCTG
GAGGACGGCCGCACCCTGTCGGACTACAACATCCAAAAGGAGTCCACTCT
TCATTTGGTGCTCCGCCTCCGCGGCGGCATGCAGATCTTCGTGAAGACCT
TGACGGGTAAGACGATCACTCTGGACGTGGAGCCGTCCGACACGATCGAT
GGCGTGAAACAGAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAACA
GCGCCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCCGCACCCTGTCGG
ACTACAACATCCAGAAGGAGTCCACTCTCCACCTGGTGCTCCGCCTCCGC
GGCGGCATGCAGATCTTCGTGAAGACCTTGACGGGTAAGATGCAGATCTT
CGTTAAGACCCTGACGGGGAAGACGATCACTCTGGACGTGGAGCCGTCCG
ACACGATCGACGGGGTGAAGCAGAAGATCCAGGACAAGGAGGGCATTCCC
CCGGACCAGCAGCGCCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCCG
CACCCTGTCGGACTACAACATCCAAAAGGAGTCCACTCTTCATTTGGTGC
TCCGCCTCCGCGGCGGCATGCAGATCTTCGTGAAGACCTTGACGGGTAAG
ACGATCACTCTGGACGTGGAGCCGTCCGACACGATCGATGGCGTGAAACA
GAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAACAGCGCCTGATCT
TCGCGGGCAAGCAGCTGGAGGACGGCCGCACCCTGTCGGACTACAACATC
CAGAAGGAGTCCACTCTCCACCTGGTGCTCCGCCTCCGCGGCGGCATGCA
GATCTTCGTGAAGACCTTGACGGGTAAG
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