prot_F-serratus_M_contig96.20913.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig96.20913.1
Unique Nameprot_F-serratus_M_contig96.20913.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length179
Homology
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BLAST of mRNA_F-serratus_M_contig96.20913.1 vs. uniprot
Match: A0A1Y1XLM2_9FUNG (Ubiquitin n=2 Tax=Zoopagomycota TaxID=1913638 RepID=A0A1Y1XLM2_9FUNG)

HSP 1 Score: 270 bits (691), Expect = 8.370e-91
Identity = 146/177 (82.49%), Postives = 148/177 (83.62%), Query Frame = 0 
Query:    1 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLXXXXXXXXXXXXXXXXXXXXXXXXXSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 177
            MQIFVKTLTGKTITL+VE SDTID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTL                         SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VE SDTID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTL-------------------------SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
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BLAST of mRNA_F-serratus_M_contig96.20913.1 vs. uniprot
Match: J4C7J8_THEOR (Ubiquitin n=4 Tax=cellular organisms TaxID=131567 RepID=J4C7J8_THEOR)

HSP 1 Score: 270 bits (691), Expect = 8.960e-91
Identity = 145/178 (81.46%), Postives = 149/178 (83.71%), Query Frame = 0 
Query:    1 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLXXXXXXXXXXXXXXXXXXXXXXXXXSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 178
            MQIFVKTLTGKTITL+VEPSDTI+ VK KIQDKEGIPPDQQRLIFAGKQLEDGRTL                         SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL+VEPSDTI+ VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL-------------------------SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 153
[Close]
BLAST of mRNA_F-serratus_M_contig96.20913.1 vs. uniprot
Match: A0A078A4M5_STYLE (Ubiquitin c n=10 Tax=Alveolata TaxID=33630 RepID=A0A078A4M5_STYLE)

HSP 1 Score: 273 bits (697), Expect = 1.350e-90
Identity = 146/178 (82.02%), Postives = 149/178 (83.71%), Query Frame = 0 
Query:    1 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLXXXXXXXXXXXXXXXXXXXXXXXXXSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 178
            MQIFVKTLTGKTITLDVEPSDTI+ VK KIQDKEGIPPDQQRLIFAGKQLEDGRTL                         SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTI+ VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL-------------------------SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
[Close]
BLAST of mRNA_F-serratus_M_contig96.20913.1 vs. uniprot
Match: D7FWC9_ECTSI (Similar to ubiquitin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWC9_ECTSI)

HSP 1 Score: 285 bits (729), Expect = 1.410e-90
Identity = 152/178 (85.39%), Postives = 153/178 (85.96%), Query Frame = 0 
Query:    1 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLXXXXXXXXXXXXXXXXXXXXXXXXXSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 178
            MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTL                         SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct:  153 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTL-------------------------SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 305
[Close]
BLAST of mRNA_F-serratus_M_contig96.20913.1 vs. uniprot
Match: V5AYC1_TOXGV (Putative polyubiquitin UbC n=1 Tax=Toxoplasma gondii (strain ATCC 50861 / VEG) TaxID=432359 RepID=V5AYC1_TOXGV)

HSP 1 Score: 273 bits (697), Expect = 1.450e-90
Identity = 146/178 (82.02%), Postives = 149/178 (83.71%), Query Frame = 0 
Query:    1 MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLXXXXXXXXXXXXXXXXXXXXXXXXXSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 178
            MQIFVKTLTGKTITLDVEPSDTI+ VK KIQDKEGIPPDQQRLIFAGKQLEDGRTL                         SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTI+ VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL-------------------------SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig96.20913.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Y1XLM2_9FUNG8.370e-9182.49Ubiquitin n=2 Tax=Zoopagomycota TaxID=1913638 RepI... [more]
J4C7J8_THEOR8.960e-9181.46Ubiquitin n=4 Tax=cellular organisms TaxID=131567 ... [more]
A0A078A4M5_STYLE1.350e-9082.02Ubiquitin c n=10 Tax=Alveolata TaxID=33630 RepID=A... [more]
D7FWC9_ECTSI1.410e-9085.39Similar to ubiquitin n=2 Tax=Ectocarpus TaxID=2879... [more]
V5AYC1_TOXGV1.450e-9082.02Putative polyubiquitin UbC n=1 Tax=Toxoplasma gond... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019956UbiquitinPRINTSPR00348UBIQUITINcoord: 112..132
score: 74.16
coord: 133..153
score: 95.05
coord: 154..175
score: 92.03
IPR000626Ubiquitin domainSMARTSM00213ubq_7coord: 102..173
e-value: 2.9E-35
score: 133.1
coord: 1..97
e-value: 4.2E-25
score: 99.4
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 3..57
e-value: 1.2E-23
score: 82.6
coord: 104..175
e-value: 2.1E-33
score: 113.9
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 1..101
score: 27.382
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 102..177
score: 30.67
NoneNo IPR availableGENE3D3.10.20.90coord: 1..51
e-value: 2.8E-31
score: 109.4
NoneNo IPR availableGENE3D3.10.20.90coord: 103..178
e-value: 3.3E-45
score: 154.2
NoneNo IPR availableGENE3D3.10.20.90coord: 57..102
e-value: 2.1E-25
score: 90.5
NoneNo IPR availablePANTHERPTHR10666UBIQUITINcoord: 1..56
coord: 57..177
NoneNo IPR availablePANTHERPTHR10666:SF327coord: 1..56
coord: 57..177
IPR019954Ubiquitin conserved sitePROSITEPS00299UBIQUITIN_1coord: 128..153
IPR019954Ubiquitin conserved sitePROSITEPS00299UBIQUITIN_1coord: 27..52
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 57..101
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 101..177
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 1..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig96contigF-serratus_M_contig96:288019..288708 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig96.20913.1mRNA_F-serratus_M_contig96.20913.1Fucus serratus malemRNAF-serratus_M_contig96 287703..289325 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig96.20913.1 ID=prot_F-serratus_M_contig96.20913.1|Name=mRNA_F-serratus_M_contig96.20913.1|organism=Fucus serratus male|type=polypeptide|length=179bp
MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQL
EDGRTLDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG
GMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQ
LEDGRTLSDYNIQKESTLHLVLRLRGGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019956Ubiquitin
IPR000626Ubiquitin_dom
IPR019954Ubiquitin_CS
IPR029071Ubiquitin-like_domsf