mRNA_F-serratus_M_contig96.20913.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig96.20913.1
Unique NamemRNA_F-serratus_M_contig96.20913.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig96.20913.1 vs. uniprot
Match: A0A6H5K2A1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2A1_9PHAE)

HSP 1 Score: 364 bits (934), Expect = 1.100e-121
Identity = 193/219 (88.13%), Postives = 193/219 (88.13%), Query Frame = 2 
Query:  191 GHPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLXXXXXXXXXXXXXXXXXXXXXXXXXSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 847
            G PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTL                         SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct:   36 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTL-------------------------SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 229
[Close]
BLAST of mRNA_F-serratus_M_contig96.20913.1 vs. uniprot
Match: A0A7S1UDB6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UDB6_9STRA)

HSP 1 Score: 360 bits (924), Expect = 2.180e-120
Identity = 191/220 (86.82%), Postives = 192/220 (87.27%), Query Frame = 2 
Query:  191 GHPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLXXXXXXXXXXXXXXXXXXXXXXXXXSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 850
            G PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTL                         SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct:   19 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTL-------------------------SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 213
[Close]
BLAST of mRNA_F-serratus_M_contig96.20913.1 vs. uniprot
Match: D8LC68_ECTSI (Uncharacterized protein n=3 Tax=Eukaryota TaxID=2759 RepID=D8LC68_ECTSI)

HSP 1 Score: 364 bits (934), Expect = 1.930e-119
Identity = 193/219 (88.13%), Postives = 193/219 (88.13%), Query Frame = 2 
Query:  191 GHPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLXXXXXXXXXXXXXXXXXXXXXXXXXSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 847
            G PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTL                         SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct:  186 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTL-------------------------SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 379
[Close]
BLAST of mRNA_F-serratus_M_contig96.20913.1 vs. uniprot
Match: F0YAA4_AURAN (Polyubiquitin n=9 Tax=Stramenopiles TaxID=33634 RepID=F0YAA4_AURAN)

HSP 1 Score: 360 bits (924), Expect = 4.910e-119
Identity = 191/220 (86.82%), Postives = 192/220 (87.27%), Query Frame = 2 
Query:  191 GHPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLXXXXXXXXXXXXXXXXXXXXXXXXXSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 850
            G PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTL                         SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct:   35 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTL-------------------------SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229
[Close]
BLAST of mRNA_F-serratus_M_contig96.20913.1 vs. uniprot
Match: A0A836CJQ4_9STRA (Polyubiquitin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJQ4_9STRA)

HSP 1 Score: 361 bits (926), Expect = 6.830e-119
Identity = 192/220 (87.27%), Postives = 192/220 (87.27%), Query Frame = 2 
Query:  191 GHPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLXXXXXXXXXXXXXXXXXXXXXXXXXSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 850
            G PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTL                         SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL
Sbjct:  141 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTL-------------------------SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 335
[Close]
BLAST of mRNA_F-serratus_M_contig96.20913.1 vs. uniprot
Match: UBIQP_PHYIN (Polyubiquitin n=16 Tax=Eukaryota TaxID=2759 RepID=UBIQP_PHYIN)

HSP 1 Score: 356 bits (914), Expect = 1.130e-118
Identity = 189/219 (86.30%), Postives = 191/219 (87.21%), Query Frame = 2 
Query:  191 GHPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLXXXXXXXXXXXXXXXXXXXXXXXXXSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 847
            G PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSD+ID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTL                         SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSD+ID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct:   35 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTL-------------------------SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
[Close]
BLAST of mRNA_F-serratus_M_contig96.20913.1 vs. uniprot
Match: A0A6S8JTU4_9STRA (Hypothetical protein n=7 Tax=Sar TaxID=2698737 RepID=A0A6S8JTU4_9STRA)

HSP 1 Score: 355 bits (910), Expect = 4.530e-118
Identity = 189/219 (86.30%), Postives = 189/219 (86.30%), Query Frame = 2 
Query:  191 GHPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLXXXXXXXXXXXXXXXXXXXXXXXXXSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 847
            G PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VK KIQDKEGIPPDQQRLIFAGKQLEDGRTL                         SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct:   35 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTL-------------------------SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
[Close]
BLAST of mRNA_F-serratus_M_contig96.20913.1 vs. uniprot
Match: A0A7S1B3W7_9STRA (Hypothetical protein (Fragment) n=3 Tax=Coscinodiscophyceae TaxID=33836 RepID=A0A7S1B3W7_9STRA)

HSP 1 Score: 355 bits (912), Expect = 6.250e-118
Identity = 189/220 (85.91%), Postives = 190/220 (86.36%), Query Frame = 2 
Query:  191 GHPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLXXXXXXXXXXXXXXXXXXXXXXXXXSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 850
            G PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VK KIQDKEGIPPDQQRLIFAGKQLEDGRTL                         SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct:   62 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL-------------------------SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 256
[Close]
BLAST of mRNA_F-serratus_M_contig96.20913.1 vs. uniprot
Match: M9NZH2_PARCA (Polyubiquitin (Fragment) n=1 Tax=Paramecium caudatum TaxID=5885 RepID=M9NZH2_PARCA)

HSP 1 Score: 355 bits (912), Expect = 7.710e-118
Identity = 189/220 (85.91%), Postives = 190/220 (86.36%), Query Frame = 2 
Query:  191 GHPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLXXXXXXXXXXXXXXXXXXXXXXXXXSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 850
            G PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VK KIQDKEGIPPDQQRLIFAGKQLEDGRTL                         SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct:   35 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL-------------------------SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229
[Close]
BLAST of mRNA_F-serratus_M_contig96.20913.1 vs. uniprot
Match: A0A835ZEZ7_9STRA (Ubiquitin-related domain-containing protein n=4 Tax=Eukaryota TaxID=2759 RepID=A0A835ZEZ7_9STRA)

HSP 1 Score: 360 bits (924), Expect = 8.090e-118
Identity = 191/220 (86.82%), Postives = 192/220 (87.27%), Query Frame = 2 
Query:  191 GHPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLXXXXXXXXXXXXXXXXXXXXXXXXXSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 850
            G PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTL                         SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTID VKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct:   35 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTL-------------------------SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig96.20913.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K2A1_9PHAE1.100e-12188.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1UDB6_9STRA2.180e-12086.82Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
D8LC68_ECTSI1.930e-11988.13Uncharacterized protein n=3 Tax=Eukaryota TaxID=27... [more]
F0YAA4_AURAN4.910e-11986.82Polyubiquitin n=9 Tax=Stramenopiles TaxID=33634 Re... [more]
A0A836CJQ4_9STRA6.830e-11987.27Polyubiquitin n=1 Tax=Tribonema minus TaxID=303371... [more]
UBIQP_PHYIN1.130e-11886.30Polyubiquitin n=16 Tax=Eukaryota TaxID=2759 RepID=... [more]
A0A6S8JTU4_9STRA4.530e-11886.30Hypothetical protein n=7 Tax=Sar TaxID=2698737 Rep... [more]
A0A7S1B3W7_9STRA6.250e-11885.91Hypothetical protein (Fragment) n=3 Tax=Coscinodis... [more]
M9NZH2_PARCA7.710e-11885.91Polyubiquitin (Fragment) n=1 Tax=Paramecium caudat... [more]
A0A835ZEZ7_9STRA8.090e-11886.82Ubiquitin-related domain-containing protein n=4 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig96contigF-serratus_M_contig96:287703..289325 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score288.1
Seed ortholog evalue2.8e-75
Seed eggNOG ortholog2880.D7FWC9
Preferred nameUBC
KEGG koko:K02927,ko:K04551,ko:K08770,ko:K12158
KEGG Pathwayko03010,ko03320,ko04137,ko04144,ko05012,ko05167,map03010,map03320,map04137,map04144,map05012,map05167
KEGG ModuleM00177,M00179
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0031386,GO:0032446,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0045116,GO:0070647,GO:0071704,GO:1901564
EggNOG free text desc.ubiquitin
EggNOG OGsCOG5272@1,KOG0001@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011,ko04121,ko04147
Exons2
Model size1470
Cds size537
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig96.20913.1prot_F-serratus_M_contig96.20913.1Fucus serratus malepolypeptideF-serratus_M_contig96 288019..288708 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932726.2441187-UTR-F-serratus_M_contig96:287702..2880181622932726.2441187-UTR-F-serratus_M_contig96:287702..288018Fucus serratus maleUTRF-serratus_M_contig96 287703..288018 +
1690964442.9260557-UTR-F-serratus_M_contig96:287702..2880181690964442.9260557-UTR-F-serratus_M_contig96:287702..288018Fucus serratus maleUTRF-serratus_M_contig96 287703..288018 +
1622932726.3045785-UTR-F-serratus_M_contig96:288708..2893251622932726.3045785-UTR-F-serratus_M_contig96:288708..289325Fucus serratus maleUTRF-serratus_M_contig96 288709..289325 +
1690964442.9600213-UTR-F-serratus_M_contig96:288708..2893251690964442.9600213-UTR-F-serratus_M_contig96:288708..289325Fucus serratus maleUTRF-serratus_M_contig96 288709..289325 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932726.2725985-CDS-F-serratus_M_contig96:288018..2881861622932726.2725985-CDS-F-serratus_M_contig96:288018..288186Fucus serratus maleCDSF-serratus_M_contig96 288019..288186 +
1690964442.9395127-CDS-F-serratus_M_contig96:288018..2881861690964442.9395127-CDS-F-serratus_M_contig96:288018..288186Fucus serratus maleCDSF-serratus_M_contig96 288019..288186 +
1622932726.2870493-CDS-F-serratus_M_contig96:288339..2887081622932726.2870493-CDS-F-serratus_M_contig96:288339..288708Fucus serratus maleCDSF-serratus_M_contig96 288340..288708 +
1690964442.9497662-CDS-F-serratus_M_contig96:288339..2887081690964442.9497662-CDS-F-serratus_M_contig96:288339..288708Fucus serratus maleCDSF-serratus_M_contig96 288340..288708 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig96.20913.1

>prot_F-serratus_M_contig96.20913.1 ID=prot_F-serratus_M_contig96.20913.1|Name=mRNA_F-serratus_M_contig96.20913.1|organism=Fucus serratus male|type=polypeptide|length=179bp
MQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQL
EDGRTLDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG
GMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQ
LEDGRTLSDYNIQKESTLHLVLRLRGGL*
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mRNA from alignment at F-serratus_M_contig96:287703..289325+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig96.20913.1 ID=mRNA_F-serratus_M_contig96.20913.1|Name=mRNA_F-serratus_M_contig96.20913.1|organism=Fucus serratus male|type=mRNA|length=1623bp|location=Sequence derived from alignment at F-serratus_M_contig96:287703..289325+ (Fucus serratus male)
GCAAGCAACTGGAGGACGGCCGCACCCTGTCGGACTACAACATCCAGAAG
GAGTCCACTCTCCACCTGGTGCTCCGCCTCCGCGGCGGCATGCAGATCTT
CGTGAAGACCCTGACGGGGAAGACGATAACTCTGGACGTGGAGCCGTCCG
ACACGATCGATGGCGTGAAACAGAAGATCCAGGACAAGGAGGGCATCCCC
CGGACCAGCAGCGCCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCCGC
ACCCTGTCGGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTGCT
CCGCCTTCGCGGCGGCATGCAGATCTTCGTGAAGACCCTGACGGGGAAGA
CGATCACTCTGGACGTGGAGCCGTCCGACACGATCGATGGCGTGAAGCAG
AAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGCCTGATCTT
CGCGGGCAAGCAGCTGGAGGATGGCCGAACCCTGGCGGACTACAACATCC
AGAAGGAGTCCACTCTCCACCTGGTGCTCCGCCTCCGCGGCGGCATGCAG
ATCTTCGTGAAGACACTTACGGGGAAGACGATCACGCTAGACGTCGAACC
GTCCGACACTATCGATGGCGTGAAACAGAAGATCCAGGACAAGGAGGGCA
TCCCCCCGGACCAGCAGCGCCTTATCTTTGCGGGCAAGCAGCTGGAGGAC
GGCCGCACCCTGTCGGACTACAACATACAGAAGGAGTCCACTCTCCACCT
GGTGCTCCGTCTCCGCGGCGGCATGCAGATCTTCGTGAAGACACTGACGG
GTAAGACGATTACTCTGGACGTGGAGCCATCCGACACGATCGATGGCGTG
AAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGCCT
GATCTTCGCGGGCAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTACA
ACATCCAGAAGGAATCCACTCTCCACCTGGTGCTCCGCCTCCGCGGGGGA
CTCTAGTCGCGTGCAGTTCAAGGATGATTGATTGACGACTGGGAATGGGA
GGAAGTAGATAAGTCATGAATTGTTGTACTAAGTGTGGCACGCTGAGGAA
GAATATTGCTGAAACGATGAGGAAACTAGAAGCCATTATCCTGTAGAAAA
TGTAGAGCATGTGTCACCTGGGGCGGTTTGGTACACTCGGTTCGATGAGA
AAGCGCAATTTATTGCCGAACGAAAGTTAATCAATATCCTGTAAAAAAAT
GTAGATAAGCGTTACATGGGGCGGTATGGTACACTCGGTTTCGATGAGTA
AGCGTAATTTGTTGTCGAATGAAAGTTGAATGCCAAGGGAGAAATATCGA
CTATAATGCGTGATGTTTCGAGCGTTGTCGTGAATCGCATGTCCTGCTGC
ATAATATGCTGTACTACGGCGTTGGAAAGAAACTCATGCGAGCGATCGTT
TTGTTTCAATCATTCAGCGGCCCATCGTTCACAGCTAAATGATTGGAAGG
TGCCCCCGCACGATTCTAGCTCTCCCTACCATGTATCTCGGGAGCACGAT
TAAAAAAATAACAGACGAAAAAGCCCCCCCCCCGATCTGATCGGAGGGGA
GGGGAAAAATAAATAAGACGAGC
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Coding sequence (CDS) from alignment at F-serratus_M_contig96:287703..289325+

>mRNA_F-serratus_M_contig96.20913.1 ID=mRNA_F-serratus_M_contig96.20913.1|Name=mRNA_F-serratus_M_contig96.20913.1|organism=Fucus serratus male|type=CDS|length=1074bp|location=Sequence derived from alignment at F-serratus_M_contig96:287703..289325+ (Fucus serratus male)
ATGCAGATCTTCGTGAAGACCCTGACGGGGAAGACGATCACTCTGGACGT
GGAGCCGTCCGACACGATCGATGGCGTGAAGCAGAAGATCCAGGACAAGG
AGGGCATCCCCCCGGACCAGCAGCGCCTGATCTTCGCGGGCAAGCAGCTG
GAGGATGGCCGAACCCTGATGCAGATCTTCGTGAAGACCCTGACGGGGAA
GACGATCACTCTGGACGTGGAGCCGTCCGACACGATCGATGGCGTGAAGC
AGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGCCTGATC
TTCGCGGGCAAGCAGCTGGAGGATGGCCGAACCCTGGACAAGGAGGGCAT
CCCCCCGGACCAGCAGCGCCTTATCTTTGCGGGCAAGCAGCTGGAGGACG
GCCGCACCCTGTCGGACTACAACATACAGAAGGAGTCCACTCTCCACCTG
GTGCTCCGTCTCCGCGGCGGCATGCAGATCTTCGTGAAGACACTGACGGG
TAAGACGATTACTCTGGACGTGGAGCCATCCGACACGATCGATGGCGTGA
AGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGCCTG
ATCTTCGCGGGCAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTACAA
CATCCAGAAGGAATCCACTCTCCACCTGGTGCTCCGCCTCCGCGGGGGAC
TCTAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGCCTTATCTTTGCG
GGCAAGCAGCTGGAGGACGGCCGCACCCTGTCGGACTACAACATACAGAA
GGAGTCCACTCTCCACCTGGTGCTCCGTCTCCGCGGCGGCATGCAGATCT
TCGTGAAGACACTGACGGGTAAGACGATTACTCTGGACGTGGAGCCATCC
GACACGATCGATGGCGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCC
CCCGGACCAGCAGCGCCTGATCTTCGCGGGCAAGCAGCTGGAGGATGGCC
GCACCCTGTCGGACTACAACATCCAGAAGGAATCCACTCTCCACCTGGTG
CTCCGCCTCCGCGGGGGACTCTAG
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