prot_F-serratus_M_contig955.20897.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig955.20897.1
Unique Nameprot_F-serratus_M_contig955.20897.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length174
Homology
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BLAST of mRNA_F-serratus_M_contig955.20897.1 vs. uniprot
Match: A0A6H5L6D7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D7_9PHAE)

HSP 1 Score: 242 bits (618), Expect = 2.030e-79
Identity = 130/177 (73.45%), Postives = 145/177 (81.92%), Query Frame = 0 
Query:    1 MVRFIV-ASAVFALLLGFSTVDASKE----NIYFTVYERQSDDGPRHSPLFNLPVG-GEEGQFPSKMVLFNNDLYGSESGLINEDHDDIVGYNQGHCVETVASEGFIAECFFTYVFDDGSLTANGPFNFDASSRSVLPSVLAVTGGTGDYAATQGEAALSAGPAEDFPSLQFDFKLK 171
            MVRFIV AS  FALLLGF+TV+AS+     ++ FTV+ERQSDDGPRHSPLF LPV   E+ ++PSKMVLFNNDLYGSE  LI+E  D ++GYNQGHCVETVAS GFIAECFFTYVFDDGSLTANGPFNFDA    VLPS LAVTGGTG+Y    G   +SAGPAE+FPSLQFDFKLK
Sbjct:    1 MVRFIVNASVAFALLLGFATVEASRGKHEGSVEFTVFERQSDDGPRHSPLFTLPVPEAEDVEYPSKMVLFNNDLYGSEDDLIDEVQDALLGYNQGHCVETVASGGFIAECFFTYVFDDGSLTANGPFNFDAED-GVLPSFLAVTGGTGEYDGALGCVEVSAGPAEEFPSLQFDFKLK 176
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BLAST of mRNA_F-serratus_M_contig955.20897.1 vs. uniprot
Match: D8LRY1_ECTSI (Potential Allene oxide cyclase, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRY1_ECTSI)

HSP 1 Score: 177 bits (449), Expect = 1.390e-54
Identity = 87/111 (78.38%), Postives = 95/111 (85.59%), Query Frame = 0 
Query:   61 MVLFNNDLYGSESGLINEDHDDIVGYNQGHCVETVASEGFIAECFFTYVFDDGSLTANGPFNFDASSRSVLPSVLAVTGGTGDYAATQGEAALSAGPAEDFPSLQFDFKLK 171
            MVLFNNDLYGSE  LI+ED ++++GYNQGHCVETVAS GFIAECFFTYVFDDGSLTANGPFNFD     VLPS LAVTGGTG+Y   QG   +SAGPAE+FPSLQFDFKLK
Sbjct:    1 MVLFNNDLYGSEDHLIDEDQEELIGYNQGHCVETVASGGFIAECFFTYVFDDGSLTANGPFNFDVED-GVLPSFLAVTGGTGEYDGAQGCVEVSAGPAEEFPSLQFDFKLK 110
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BLAST of mRNA_F-serratus_M_contig955.20897.1 vs. uniprot
Match: A0A6N6VM22_9HYPH (Allene-oxide cyclase n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VM22_9HYPH)

HSP 1 Score: 52.8 bits (125), Expect = 1.560e-5
Identity = 37/117 (31.62%), Postives = 62/117 (52.99%), Query Frame = 0 
Query:   52 GEEGQFPSKMVLFNNDLYGSESGLINEDHDDIVGYNQGHCVETVASEGFIAECFFTYVFDDGSLTANGPFNFDASSRSVLPSVLAVTGGTGDYAATQGEAALSAGPAEDFPSLQFDF 168
            G +G     ++ F N+++       ++ + + VG + G+CV TVA + +  EC +T     G +T  GPF  DA       S+LA+TGG+G+YA  +G+  L A  A+     ++DF
Sbjct:   52 GAKGDSNGDVLTFANEVF-------DKSNKEKVGTDNGYCVRTVAGKAW--ECIWTLSLAKGQITVEGPF-LDAGD-----SMLAITGGSGEYAHARGDMLLHARNAQ---GSEYDF 150
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig955.20897.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L6D7_9PHAE2.030e-7973.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRY1_ECTSI1.390e-5478.38Potential Allene oxide cyclase, partial n=1 Tax=Ec... [more]
A0A6N6VM22_9HYPH1.560e-531.62Allene-oxide cyclase n=1 Tax=Parvibaculum sediment... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034871Allene oxide cyclase superfamilyGENE3D2.40.480.10coord: 16..173
e-value: 6.5E-11
score: 43.8
IPR034871Allene oxide cyclase superfamilySUPERFAMILY141493Allene oxide cyclase-likecoord: 41..154
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..173
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.855

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig955contigF-serratus_M_contig955:117722..119685 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig955.20897.1mRNA_F-serratus_M_contig955.20897.1Fucus serratus malemRNAF-serratus_M_contig955 117667..119685 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig955.20897.1 ID=prot_F-serratus_M_contig955.20897.1|Name=mRNA_F-serratus_M_contig955.20897.1|organism=Fucus serratus male|type=polypeptide|length=174bp
MVRFIVASAVFALLLGFSTVDASKENIYFTVYERQSDDGPRHSPLFNLPV
GGEEGQFPSKMVLFNNDLYGSESGLINEDHDDIVGYNQGHCVETVASEGF
IAECFFTYVFDDGSLTANGPFNFDASSRSVLPSVLAVTGGTGDYAATQGE
AALSAGPAEDFPSLQFDFKLKGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034871Allene_oxi_cyc_sf