prot_F-serratus_M_contig953.20894.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig953.20894.1
Unique Nameprot_F-serratus_M_contig953.20894.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length164
Homology
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BLAST of mRNA_F-serratus_M_contig953.20894.1 vs. uniprot
Match: A0A6H5K8T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T1_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 4.710e-25
Identity = 55/116 (47.41%), Postives = 72/116 (62.07%), Query Frame = 0 
Query:   18 ERMLSLRMIGLLSNGRVLAALRYVASAMVILSMEWPGVQWEGWLHCPNHPGTRMYLTKPREARIGGPLVHEQIQDEDSMNCDCQLQPNGVLQLVYQRLGTVVDTRKGHPIEGFEEE 133
            ER+ + ++ G L + RV  A+RYVASAM+ LS EWPGV W GWL C  HP   +Y+    EAR+G PL+     D  +  CDC L+P GVL+L  + LG V+DT K  P EG  +E
Sbjct:  583 ERVFTAKVFGPLDSERVWVAIRYVASAMINLSKEWPGVLWTGWLDCEKHPSQHLYMASSVEARVGDPLLPAAAPD--ARRCDCLLEPGGVLRLAVEELGPVIDTGKD-PFEGLSDE 695
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BLAST of mRNA_F-serratus_M_contig953.20894.1 vs. uniprot
Match: A0A6H5JW02_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW02_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 2.110e-19
Identity = 52/124 (41.94%), Postives = 70/124 (56.45%), Query Frame = 0 
Query:    5 GKEIPFTFLIRY------HERMLSLRMIGLLSNGRVLAALRYVASAMVILSMEWPGVQWEGWLHCPNHPGTRMYLTKPREARIGGPLVHEQIQDEDSMNCDCQLQPNGVLQLVYQRLGTVVDTR 122
            G +  +TF++RY        R+LS+RM G L + RV AALR+VAS++V +S +WPGV WEGW  C      R Y     +A IG  L+ +         CDC      VL+LV +RLG VVDT+
Sbjct:  714 GSDRLYTFVVRYDSAVGNERRILSMRMFGPLQDNRVWAALRWVASSVVNISKDWPGVLWEGWPQCARRHRNRTYFATSDKASIGDFLLADAATGATRRGCDCLAVEGTVLRLVLERLGKVVDTQ 837
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig953.20894.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K8T1_9PHAE4.710e-2547.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JW02_9PHAE2.110e-1941.94Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 43..163
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig953contigF-serratus_M_contig953:23137..24143 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig953.20894.1mRNA_F-serratus_M_contig953.20894.1Fucus serratus malemRNAF-serratus_M_contig953 22961..25076 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig953.20894.1 ID=prot_F-serratus_M_contig953.20894.1|Name=mRNA_F-serratus_M_contig953.20894.1|organism=Fucus serratus male|type=polypeptide|length=164bp
MRRHGKEIPFTFLIRYHERMLSLRMIGLLSNGRVLAALRYVASAMVILSM
EWPGVQWEGWLHCPNHPGTRMYLTKPREARIGGPLVHEQIQDEDSMNCDC
QLQPNGVLQLVYQRLGTVVDTRKGHPIEGFEEETILQRIQRSLNAVAGFS
MFGGRGPSKRREH*
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