prot_F-serratus_M_contig943.20796.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig943.20796.1
Unique Nameprot_F-serratus_M_contig943.20796.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length176
Homology
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BLAST of mRNA_F-serratus_M_contig943.20796.1 vs. uniprot
Match: D8LFQ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFQ8_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 9.260e-15
Identity = 44/109 (40.37%), Postives = 68/109 (62.39%), Query Frame = 0 
Query:   11 SLLAHIMSSFFVRGNAEPWSTEIPSS---ASSPFLYYVDVFLGESPEPRTLGIRNGQTVIQAAKRFCLENGFDNNLQAAIIPQLAKVLQDGIAASIEGNVSTIYDAALP 116
            SL++ +  ++ + GN++ W ++  ++   ASS FL+ VDV L ES     LGIR+GQTV +AA  FC E G D  +Q+A++PQL KVL+DGI   +        +A++P
Sbjct:   10 SLVSCLTITYIIGGNSQTWPSDAAAATAIASSDFLFSVDVVLDESAVAVPLGIRDGQTVAEAALGFCHEQGLDGAMQSALMPQLMKVLEDGITEVVGPPFPVGDEASIP 118
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig943.20796.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LFQ8_ECTSI9.260e-1540.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..176
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.648

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig943contigF-serratus_M_contig943:168900..171652 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig943.20796.1mRNA_F-serratus_M_contig943.20796.1Fucus serratus malemRNAF-serratus_M_contig943 168515..171652 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig943.20796.1 ID=prot_F-serratus_M_contig943.20796.1|Name=mRNA_F-serratus_M_contig943.20796.1|organism=Fucus serratus male|type=polypeptide|length=176bp
MVLIRTLVMTSLLAHIMSSFFVRGNAEPWSTEIPSSASSPFLYYVDVFLG
ESPEPRTLGIRNGQTVIQAAKRFCLENGFDNNLQAAIIPQLAKVLQDGIA
ASIEGNVSTIYDAALPPRYPDQSSMVSEDVDTSMDQSSMASEDMHTSMDQ
SSMVSEDVETSMDQSSMASEDMHTSM
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