prot_F-serratus_M_contig94.20762.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig94.20762.1
Unique Nameprot_F-serratus_M_contig94.20762.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length179
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig94.20762.1 vs. uniprot
Match: D7G8Z3_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Z3_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 6.050e-13
Identity = 32/46 (69.57%), Postives = 38/46 (82.61%), Query Frame = 0 
Query:   22 KLRKSCDPCSLAKRRCDGQPQCSLCVKKGIHCIYGERQKSGPKGRK 67
            K+R+SCD C+LAKRRCDG+ +CSLC KK I C+Y  RQKSGPKG K
Sbjct:   23 KMRRSCDACALAKRRCDGELRCSLCCKKSIRCVYSTRQKSGPKGHK 68
[Close]
BLAST of mRNA_F-serratus_M_contig94.20762.1 vs. uniprot
Match: A0A6H5JWH9_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWH9_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 2.860e-12
Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 0 
Query:   22 KLRKSCDPCSLAKRRCDGQPQCSLCVKKGIHCIYGERQKSGPKGRKGLA 70
            K+R+SCD C+LAKRRCDG+ +C LC KK I C+Y  RQKSGPKG K  A
Sbjct:   23 KMRRSCDACALAKRRCDGELRCLLCCKKSIRCVYSTRQKSGPKGHKAPA 71
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig94.20762.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8Z3_ECTSI6.050e-1369.57Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5JWH9_9PHAE2.860e-1265.31Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 69..89
NoneNo IPR availablePANTHERPTHR47663FAMILY NOT NAMEDcoord: 16..156
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 21..64
e-value: 6.0E-7
score: 39.1
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 25..60
e-value: 1.4E-7
score: 31.5
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS00463ZN2_CY6_FUNGAL_1coord: 26..53
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 26..55
score: 8.665
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 24..103
e-value: 2.5E-9
score: 39.4
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 20..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig94contigF-serratus_M_contig94:93048..97332 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig94.20762.1mRNA_F-serratus_M_contig94.20762.1Fucus serratus malemRNAF-serratus_M_contig94 93048..97334 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig94.20762.1 ID=prot_F-serratus_M_contig94.20762.1|Name=mRNA_F-serratus_M_contig94.20762.1|organism=Fucus serratus male|type=polypeptide|length=179bp
MECAQPSHGAGERKPSGSGIPKLRKSCDPCSLAKRRCDGQPQCSLCVKKG
IHCIYGERQKSGPKGRKGLAAASTQRQQLLLQQQQHQQQQQLNQGQRHGS
VQPPGRRRGPFVPAQPTRTGDITGDAPPPPSQTRPHPHPATDERSPLDAT
TSSARHILDSSSDGSIDGKDRDVRTMVIR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf