prot_F-serratus_M_contig929.20677.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig929.20677.1
Unique Nameprot_F-serratus_M_contig929.20677.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length500
Homology
BLAST of mRNA_F-serratus_M_contig929.20677.1 vs. uniprot
Match: A0A6H5KE00_9PHAE (YTH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE00_9PHAE)

HSP 1 Score: 205 bits (521), Expect = 1.660e-53
Identity = 102/160 (63.75%), Postives = 124/160 (77.50%), Query Frame = 0
Query:  146 GGSGAGKAGRKKAPVLLFFSVHQSGQFCGAAQLTGPLEHRLKKIRAYAPERWRTHFPVKWIFAKDLPNHQLRHITLPNNNNKPVAAAKDAQELLRDQGLQLLKAFHRHKHTTSIVDDFAFYENRAIIYQ-RSRQQQQ------PSGAFGNPYAMQMNAQQ 298
            GG GAG++ +K  PV LFFSV+QS QFCGAAQL GPL+H+ KK++  A +RWR+HFPVKW+FAKDLPN QL+HITLPNN  KPVAAAKD+QE+  +QGLQ+LKAFH HKH TSIVDD+AFYENRA+ +Q R + Q Q      P+  +GNPYA     QQ
Sbjct:  967 GGKGAGRSNKKAPPVFLFFSVYQSAQFCGAAQLCGPLDHQGKKVKGRAHDRWRSHFPVKWVFAKDLPNQQLKHITLPNN--KPVAAAKDSQEVPFEQGLQMLKAFHEHKHVTSIVDDYAFYENRAMQHQHRPKHQHQQHGNNHPANQYGNPYATHFTPQQ 1124          
BLAST of mRNA_F-serratus_M_contig929.20677.1 vs. uniprot
Match: D7G0F3_ECTSI (Putative RNA-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0F3_ECTSI)

HSP 1 Score: 193 bits (491), Expect = 1.050e-51
Identity = 94/145 (64.83%), Postives = 115/145 (79.31%), Query Frame = 0
Query:  146 GGSGAGKAGRKKAPVLLFFSVHQSGQFCGAAQLTGPLEHRLKKIRAYAPERWRTHFPVKWIFAKDLPNHQLRHITLPNNNNKPVAAAKDAQELLRDQGLQLLKAFHRHKHTTSIVDDFAFYENRAIIYQ-RSRQQQQPSGAFGNP 289
            GG GAG+  +K  PV LFFSV+QS QFCGAAQL GPL+H+ KK++  A +RWR+ FPVKW+FAKDLPN QL+HITLPNN  KPVAAAKD+QE+  +QGLQ+LKAFH H H TSIVDD+AFYENRA+ +Q R + Q Q  G+  +P
Sbjct:  392 GGKGAGRGNKKAPPVFLFFSVYQSAQFCGAAQLCGPLDHQGKKVKGRAHDRWRSRFPVKWVFAKDLPNQQLKHITLPNN--KPVAAAKDSQEVPFEQGLQMLKAFHEHTHVTSIVDDYAFYENRALQHQHRPKHQHQQHGSSNHP 534          
BLAST of mRNA_F-serratus_M_contig929.20677.1 vs. uniprot
Match: UPI00187CEE7C (YTH domain-containing protein ECT3-like n=1 Tax=Artibeus jamaicensis TaxID=9417 RepID=UPI00187CEE7C)

HSP 1 Score: 135 bits (341), Expect = 2.850e-34
Identity = 65/130 (50.00%), Postives = 87/130 (66.92%), Query Frame = 0
Query:  159 PVLLFFSVHQSGQFCGAAQLTGPLEHRLKKIRAYAPERWRTHFPVKWIFAKDLPNHQLRHITLPNNNNKPVAAAKDAQELLRDQGLQLLKAFHRHKHTTSIVDDFAFYENRAIIYQRSRQQQQPSGAFGN 288
            PV LFFSV+ SGQF G A++ GP++   K +  +  ++W   F +KW   KD+PN+ L+HITL NN+NKPV  ++D QE+  +QGLQ+LK F  H   TSI+DDFAFYENR  + Q  R +QQP    GN
Sbjct:   23 PVFLFFSVNTSGQFVGVAEMVGPVDFD-KTVDYWQQDKWNGCFSIKWHIVKDIPNNILKHITLDNNDNKPVTNSRDTQEVKLEQGLQMLKIFKEHVSKTSILDDFAFYENRQKLMQEKRAKQQPLQGQGN 151          
BLAST of mRNA_F-serratus_M_contig929.20677.1 vs. uniprot
Match: Q84LJ8_AVESA (Putative RNA-binding protein (Fragment) n=1 Tax=Avena sativa TaxID=4498 RepID=Q84LJ8_AVESA)

HSP 1 Score: 132 bits (332), Expect = 1.760e-32
Identity = 69/147 (46.94%), Postives = 92/147 (62.59%), Query Frame = 0
Query:  159 PVLLFFSVHQSGQFCGAAQLTGPLEHRLKKIRAYAPERWRTHFPVKWIFAKDLPNHQLRHITLPNNNNKPVAAAKDAQELLRDQGLQLLKAFHRHKHTTSIVDDFAFYENRAIIYQRSRQQQQPSGAFGNPYAMQMNAQQNLMAQQQ 305
            PV LFFSV+ SGQF G A++ GP++   K +  +  ++W   F +KW   KD+PN+ L+HITL NN+NKPV  ++D QE+  +QGLQ+LK F  H   TSI+DDFAFYENR  + Q  R +QQ     G     +  A  N  AQQQ
Sbjct:   27 PVFLFFSVNTSGQFVGIAEMIGPVDFD-KTVDYWQQDKWNGCFSIKWHIVKDIPNNILKHITLENNDNKPVTNSRDTQEVKLEQGLQMLKIFKEHVSKTSILDDFAFYENRQKLMQEKRAKQQVLQGQGGDEKEKNAANGNSAAQQQ 172          
BLAST of mRNA_F-serratus_M_contig929.20677.1 vs. uniprot
Match: A0A5J9W7H6_9POAL (YTH domain-containing protein n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9W7H6_9POAL)

HSP 1 Score: 139 bits (351), Expect = 5.570e-32
Identity = 66/127 (51.97%), Postives = 88/127 (69.29%), Query Frame = 0
Query:  159 PVLLFFSVHQSGQFCGAAQLTGPLEHRLKKIRAYAPERWRTHFPVKWIFAKDLPNHQLRHITLPNNNNKPVAAAKDAQELLRDQGLQLLKAFHRHKHTTSIVDDFAFYENRAIIYQRSRQQQQPSGA 285
            PV LFFSV+ SGQFCG A++TGP++   K +  +  ++W   FPVKW   KD+PN+ LRHITL NN NKPV  ++D QE+  +QGLQ+L  F  H+  T+I++DF FYE R    Q +R+QQQP GA
Sbjct:  400 PVFLFFSVNGSGQFCGVAEMTGPVDFD-KSVDYWQQDKWSGQFPVKWHIIKDVPNNLLRHITLENNENKPVTNSRDTQEVKLEQGLQMLTIFKSHEAETTILEDFDFYEQREKALQENRRQQQPVGA 525          
BLAST of mRNA_F-serratus_M_contig929.20677.1 vs. uniprot
Match: UPI001584927D (YTH domain-containing protein n=1 Tax=Klebsiella pneumoniae TaxID=573 RepID=UPI001584927D)

HSP 1 Score: 132 bits (332), Expect = 6.280e-32
Identity = 62/123 (50.41%), Postives = 83/123 (67.48%), Query Frame = 0
Query:  159 PVLLFFSVHQSGQFCGAAQLTGPLEHRLKKIRAYAPERWRTHFPVKWIFAKDLPNHQLRHITLPNNNNKPVAAAKDAQELLRDQGLQLLKAFHRHKHTTSIVDDFAFYENRAIIYQRSRQQQQ 281
            PV LFFSV+ SGQF G A++ GP++   K +  +  ++W   FPVKW   KD+PN  L+HITL NN+NKPV  ++D QE+  +QGLQ+LK F  H   TSI+DDF FYENR  + Q  + +QQ
Sbjct:  115 PVFLFFSVNTSGQFVGVAEMVGPVDFN-KTVEYWQQDKWNGCFPVKWHIVKDVPNSVLKHITLENNDNKPVTNSRDTQEVKLEQGLQMLKIFKEHVSKTSILDDFMFYENRQKLMQEKKAKQQ 236          
BLAST of mRNA_F-serratus_M_contig929.20677.1 vs. uniprot
Match: D8QT35_SELML (YTH domain-containing protein (Fragment) n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QT35_SELML)

HSP 1 Score: 129 bits (325), Expect = 8.280e-32
Identity = 57/119 (47.90%), Postives = 82/119 (68.91%), Query Frame = 0
Query:  159 PVLLFFSVHQSGQFCGAAQLTGPLEHRLKKIRAYAPERWRTHFPVKWIFAKDLPNHQLRHITLPNNNNKPVAAAKDAQELLRDQGLQLLKAFHRHKHTTSIVDDFAFYENRAIIYQRSR 277
            P+ LFFSV+ SGQFCG A+++GP++  L+ +  +  ++W   F VKW F KD+ N   RHI L NN+NKPV  ++D QE+  DQGL++L+ F  +  +TSI+DDF +YENR I+ Q  R
Sbjct:   46 PIFLFFSVNGSGQFCGVAEMSGPMDF-LRSVDFWQQDKWTGRFSVKWHFIKDITNGHFRHIILENNDNKPVTNSRDTQEVQLDQGLEMLRIFKNYNSSTSILDDFQYYENRQILMQEKR 163          
BLAST of mRNA_F-serratus_M_contig929.20677.1 vs. uniprot
Match: A0A3B6LT69_WHEAT (YTH domain-containing protein n=34 Tax=Triticeae TaxID=147389 RepID=A0A3B6LT69_WHEAT)

HSP 1 Score: 135 bits (341), Expect = 1.790e-30
Identity = 69/147 (46.94%), Postives = 93/147 (63.27%), Query Frame = 0
Query:  159 PVLLFFSVHQSGQFCGAAQLTGPLEHRLKKIRAYAPERWRTHFPVKWIFAKDLPNHQLRHITLPNNNNKPVAAAKDAQELLRDQGLQLLKAFHRHKHTTSIVDDFAFYENRAIIYQRSRQQQQPSGAFGNPYAMQMNAQQNLMAQQQ 305
            PV LFFSV+ SGQF G A++ GP++   K +  +  ++W   F +KW   KD+PN+ L+HITL NN+NKPV  ++D QE+  +QGLQ+LK F  H   TSI+DDFAFYENR  + Q  R +QQP    G     +  A  N  AQ+Q
Sbjct:  486 PVFLFFSVNTSGQFVGVAEMVGPVDFD-KTVDYWQQDKWNGCFSIKWHIVKDIPNNILKHITLDNNDNKPVTNSRDTQEVKLEQGLQMLKIFKEHVSKTSILDDFAFYENRQKLMQEKRAKQQPLQGQGGDEKEKNTANGNSTAQKQ 631          
BLAST of mRNA_F-serratus_M_contig929.20677.1 vs. uniprot
Match: A0A8J5VBG8_ZIZPA (YTH domain-containing protein n=2 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5VBG8_ZIZPA)

HSP 1 Score: 135 bits (339), Expect = 2.110e-30
Identity = 62/127 (48.82%), Postives = 87/127 (68.50%), Query Frame = 0
Query:  159 PVLLFFSVHQSGQFCGAAQLTGPLEHRLKKIRAYAPERWRTHFPVKWIFAKDLPNHQLRHITLPNNNNKPVAAAKDAQELLRDQGLQLLKAFHRHKHTTSIVDDFAFYENRAIIYQRSRQQQQPSGA 285
            P+ LFFSV+ SGQFCG A++TGP++   K +  +  ++W   FPVKW   KD+PN+ LRHI L NN+NKPV  ++D QE+  + GLQ+L  F  H+  T+I+ DF FYE R    Q +R+Q+QP+GA
Sbjct:  396 PIFLFFSVNGSGQFCGVAEMTGPVDFD-KSVDYWQQDKWSGQFPVKWHIIKDVPNNLLRHIILENNDNKPVTNSRDTQEVKLEHGLQMLTIFKNHESETTIIADFNFYEQREKALQENRRQKQPAGA 521          
BLAST of mRNA_F-serratus_M_contig929.20677.1 vs. uniprot
Match: A0A0A9NUR2_ARUDO (YTH domain-containing protein n=2 Tax=Arundo donax TaxID=35708 RepID=A0A0A9NUR2_ARUDO)

HSP 1 Score: 131 bits (329), Expect = 2.110e-30
Identity = 60/125 (48.00%), Postives = 86/125 (68.80%), Query Frame = 0
Query:  159 PVLLFFSVHQSGQFCGAAQLTGPLEHRLKKIRAYAPERWRTHFPVKWIFAKDLPNHQLRHITLPNNNNKPVAAAKDAQELLRDQGLQLLKAFHRHKHTTSIVDDFAFYENRAIIYQRSRQQQQPS 283
            P+ LFFSV+ SGQFCG A++ GP++   + +  +  ++W   FPVKW   KD+PN+ LRHI L NN+NKPV  ++D QE+  +QGLQ+L  F  H+  T+I++DF FYE R    Q +R+QQQP+
Sbjct:  158 PIFLFFSVNGSGQFCGVAEMIGPVDFD-RSVDYWQQDKWSGQFPVKWHIIKDVPNNLLRHIILANNDNKPVTNSRDTQEVKLEQGLQMLTIFTNHEAETTILEDFDFYEQREKALQENRRQQQPA 281          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig929.20677.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KE00_9PHAE1.660e-5363.75YTH domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G0F3_ECTSI1.050e-5164.83Putative RNA-binding protein n=1 Tax=Ectocarpus si... [more]
UPI00187CEE7C2.850e-3450.00YTH domain-containing protein ECT3-like n=1 Tax=Ar... [more]
Q84LJ8_AVESA1.760e-3246.94Putative RNA-binding protein (Fragment) n=1 Tax=Av... [more]
A0A5J9W7H6_9POAL5.570e-3251.97YTH domain-containing protein n=1 Tax=Eragrostis c... [more]
UPI001584927D6.280e-3250.41YTH domain-containing protein n=1 Tax=Klebsiella p... [more]
D8QT35_SELML8.280e-3247.90YTH domain-containing protein (Fragment) n=4 Tax=S... [more]
A0A3B6LT69_WHEAT1.790e-3046.94YTH domain-containing protein n=34 Tax=Triticeae T... [more]
A0A8J5VBG8_ZIZPA2.110e-3048.82YTH domain-containing protein n=2 Tax=Zizania palu... [more]
A0A0A9NUR2_ARUDO2.110e-3048.00YTH domain-containing protein n=2 Tax=Arundo donax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007275YTH domainPFAMPF04146YTHcoord: 154..251
e-value: 2.8E-19
score: 69.7
IPR007275YTH domainPROSITEPS50882YTHcoord: 115..250
score: 26.625
NoneNo IPR availableGENE3D3.10.590.10coord: 150..264
e-value: 7.8E-33
score: 115.0
NoneNo IPR availablePANTHERPTHR12357:SF15METHYLATED RNA-BINDING PROTEIN 1coord: 154..355
NoneNo IPR availablePANTHERPTHR12357YTH YT521-B HOMOLOGY DOMAIN-CONTAININGcoord: 154..355

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig929contigF-serratus_M_contig929:331348..338371 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig929.20677.1mRNA_F-serratus_M_contig929.20677.1Fucus serratus malemRNAF-serratus_M_contig929 331238..338414 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig929.20677.1 ID=prot_F-serratus_M_contig929.20677.1|Name=mRNA_F-serratus_M_contig929.20677.1|organism=Fucus serratus male|type=polypeptide|length=500bp
MSGKTDGDGATDGDNVEEGVETRVATPDGTPTSADRDCKKGEHGAAEGAA
AGAGAGAETGGPGARCAKQKQQDESGEKGAKKAAAEAPDGGAELSEKAAP
AAAATGSSKAASAKAKDKAGKNHSKNTEPRAGGVGVNSASGSATVGGSGA
GKAGRKKAPVLLFFSVHQSGQFCGAAQLTGPLEHRLKKIRAYAPERWRTH
FPVKWIFAKDLPNHQLRHITLPNNNNKPVAAAKDAQELLRDQGLQLLKAF
HRHKHTTSIVDDFAFYENRAIIYQRSRQQQQPSGAFGNPYAMQMNAQQNL
MAQQQFQQQQLHLQQQQQQQQQQQHQGTGYGGGRSSGVGGTGSKKPGKKN
KKTMGNKSKRGGRTSSASGAAKAPNKSGDAEPAAPSQAADDGSSGTGKGN
KQNSQSAPGADQAAGAAVPPVDVTKTPANGNGNVNVGGDEQEGRRAEAKE
GTSAASARVGDAPDVSKGDAVKESEGFAVSAAVAGGGSASPEAASVATA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007275YTH_domain