prot_F-serratus_M_contig927.20657.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig927.20657.1
Unique Nameprot_F-serratus_M_contig927.20657.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length264
Homology
BLAST of mRNA_F-serratus_M_contig927.20657.1 vs. uniprot
Match: D8LB47_ECTSI (SNF2-rel_dom domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB47_ECTSI)

HSP 1 Score: 197 bits (502), Expect = 5.800e-54
Identity = 130/283 (45.94%), Postives = 166/283 (58.66%), Query Frame = 0
Query:   14 DASLVEGTPRRCGRGSKT-DLAGFYAPLMVSNIGGTPKYRS-LSIVQRSTLDWMVWREVVEDMSKTRKMHSGQLGFEKT-----IRGGILGHLAAEEALSCVTTLIRNAPR-----------ASAEENVVVKTSLPHGATLVIAPTKDAAEEWSKEL-GASTRLSVLSYVMPLKERRRLRAEQAAVFDVVVTTYDILRAKEVARAVKD----------VANVGRWHTRRPQEG-RKRVS---KTETMASLLHKVWWHRVVASGAQVLANQRSARANAVAGLEG 263
            D+SL EGTPRR G G++   L GFY PL V+N+    +  S LS +Q+STL WM+WRE  E   ++       +  +       I+GG+LGHL ++EA +CV  ++R                S    +   T LP G TL++APTK+AA  WS  L   S  LSVL+YVMPL+ERRRL A+Q A FDVVVTTYD+L+AKEV R V+           +    +W TR  +EG +KR S   KT+ M SLLH VWW RVVA GAQ+LA QRSARA A   L G
Sbjct: 1029 DSSLAEGTPRRRGAGARDRSLGGFYPPLQVANLANKAREGSTLSTLQKSTLQWMLWRERGEKGGRSAXXXXXXVSDDDDDGAIDIKGGLLGHLPSDEASTCVHAVVRAGVTFNDGDGSGRKVGSRARRIHTGTGLPCGPTLILAPTKEAAWRWSDRLESGSGGLSVLNYVMPLRERRRLSAKQVAAFDVVVTTYDVLKAKEVPRGVEAKEATSPRSWALPGSTQWRTRNAKEGGQKRTSASSKTDHMVSLLHGVWWDRVVADGAQILATQRSARAVAALALMG 1311          
BLAST of mRNA_F-serratus_M_contig927.20657.1 vs. uniprot
Match: A0A6H5KIY1_9PHAE (SNF2-rel_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY1_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 3.770e-51
Identity = 131/287 (45.64%), Postives = 165/287 (57.49%), Query Frame = 0
Query:   15 ASLVEGTPRRCGRGSKTD-LAGFYAPLMVSNIGGTPKYR-SLSIVQRSTLDWMVWREVVEDMSKTRKMHSGQLGFEKT-------IRGGILGHLAAEEALSCVTTLIRNAP-------------RASAEENVVVKTSLPHGATLVIAPTKDAAEEWSKEL-GASTRLSVLSYVMPLKERRRLRAEQAAVFDVVVTTYDILRAKEVARAVKD----------VANVGRWHTRRPQE-GRKR----VSKTETMASLLHKVWWHRVVASGAQVLANQRSARANAVAGLEG 263
            +SL EGTPRR G G++   L GFY PL V+N+    +   +LS +Q STL WM+WRE  E   ++       +            I+GG+LGHL++EEA +C+  L+R                RA    N    T LP G+TL++APTK+AA  WS  L   S  LSVLSYVMPL+ERRRL A+Q A FDVVVTTYD+L+AKEV R V+           +    +W TR  +E G+KR     S T+ M SLLH VWW RVVA GAQ+LA QRSARA A   L G
Sbjct: 1027 SSLAEGTPRRRGAGARDCYLGGFYPPLQVANLASKAREGLTLSTLQESTLQWMLWRERGEKGGRSAVAAGASVXXXXXXXXXAIDIKGGLLGHLSSEEASACLHALVRAGVTFNDGDGSRGMVGRARRTHN---GTGLPCGSTLILAPTKEAAWRWSDRLESGSGGLSVLSYVMPLRERRRLSAKQVAAFDVVVTTYDVLKAKEVPRGVEAKEATSPRSWALPGSTQWRTRNGKEAGQKRSSSSASMTDHMVSLLHGVWWDRVVADGAQILATQRSARAVAALTLAG 1310          
BLAST of mRNA_F-serratus_M_contig927.20657.1 vs. uniprot
Match: A0A1V9ZDT9_9STRA (SNF2 family DNA/RNA helicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZDT9_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 9.180e-8
Identity = 59/167 (35.33%), Postives = 83/167 (49.70%), Query Frame = 0
Query:   92 RGGILG-HLAAEEALSCVTTLIRNAPRASAEENVVVKTSLPHGATLVIAPTKDAAEEWSKELGASTRLSVLSYVMPLKERRRLRAEQAAVFDVVVTTYDILRAKEVARAVKDVANVGRWHTRRPQEGRKRVSKTETMASLLHKVWWHRVVASGAQVLANQRSARANA 257
            RGGIL   +   + +SC+  LI  +PR                 TL+IAP    A+ W  E+ A T LSV  Y    ++R R + +  A FDV+++TYD+LR KE A     VA+ GR          KR  + + + S LHK+ W RV+   A ++AN  SAR  A
Sbjct:  405 RGGILADEMGLGKTISCLA-LIEQSPRGRP--------------TLIIAPLSVLAQ-WEFEVKAKTSLSVGVYHGTGRKRFRHQPDFCA-FDVILSTYDVLRMKETA---VPVASAGRSRDT-SWIAAKRQREEKQLLSRLHKIHWERVILDEAHLIANMASARTQA 550          
BLAST of mRNA_F-serratus_M_contig927.20657.1 vs. uniprot
Match: A0A067CBP1_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CBP1_SAPPC)

HSP 1 Score: 62.0 bits (149), Expect = 2.980e-7
Identity = 65/203 (32.02%), Postives = 95/203 (46.80%), Query Frame = 0
Query:   58 QRSTLDWMVWREVVEDMSKTRKMHSGQLGFEKTIRGGILG-HLAAEEALSCVTTLIRNAPRASAEENVVVKTSLPHGATLVIAPTKDAAEEWSKELGASTRLSVLSYVMPLKERRRLRAEQAAVFDVVVTTYDILRAKEVARAVKDVANVGRWHTRRPQE--GRKRVSKTETMASLLHKVWWHRVVASGAQVLANQRSARANA 257
            Q   +DWM  RE              + G    I+GGIL   +   + +SC+  + R     S + N   K S P   TL+IAP      +W +E+   T LSV  Y    ++R R R      FD+V++TYD+LR  EVA  V   + V R   R+       KR+ + + + S LH+V W RV+   A ++AN  +AR  A
Sbjct:  361 QERAVDWMWQRE--------------RPGVLDEIKGGILADEMGLGKTVSCLALIER-----SRDANATEK-SRP---TLIIAPLS-LLHQWEREIKHKTSLSVGVYHGTDRKRFR-RDPDFHAFDIVLSTYDVLRLPEVAIPV---SMVYRTAPRKDTSWIATKRLREEKVLLSKLHRVHWDRVILDEAHLIANMTAARTQA 535          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig927.20657.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LB47_ECTSI5.800e-5445.94SNF2-rel_dom domain-containing protein n=1 Tax=Ect... [more]
A0A6H5KIY1_9PHAE3.770e-5145.64SNF2-rel_dom domain-containing protein n=1 Tax=Ect... [more]
A0A1V9ZDT9_9STRA9.180e-835.33SNF2 family DNA/RNA helicase n=1 Tax=Achlya hypogy... [more]
A0A067CBP1_SAPPC2.980e-732.02Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 58..261
e-value: 4.9E-13
score: 48.5
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 58..263
e-value: 2.4E-5
score: 25.6
NoneNo IPR availablePANTHERPTHR45626FAMILY NOT NAMEDcoord: 58..262
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 132..254

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig927contigF-serratus_M_contig927:120262..122435 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig927.20657.1mRNA_F-serratus_M_contig927.20657.1Fucus serratus malemRNAF-serratus_M_contig927 120262..122435 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig927.20657.1 ID=prot_F-serratus_M_contig927.20657.1|Name=mRNA_F-serratus_M_contig927.20657.1|organism=Fucus serratus male|type=polypeptide|length=264bp
DFGRGHQAQGKKADASLVEGTPRRCGRGSKTDLAGFYAPLMVSNIGGTPK
YRSLSIVQRSTLDWMVWREVVEDMSKTRKMHSGQLGFEKTIRGGILGHLA
AEEALSCVTTLIRNAPRASAEENVVVKTSLPHGATLVIAPTKDAAEEWSK
ELGASTRLSVLSYVMPLKERRRLRAEQAAVFDVVVTTYDILRAKEVARAV
KDVANVGRWHTRRPQEGRKRVSKTETMASLLHKVWWHRVVASGAQVLANQ
RSARANAVAGLEGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000330SNF2_N
IPR038718SNF2-like_sf
IPR027417P-loop_NTPase