prot_F-serratus_M_contig923.20635.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig923.20635.1
Unique Nameprot_F-serratus_M_contig923.20635.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length103
Homology
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BLAST of mRNA_F-serratus_M_contig923.20635.1 vs. uniprot
Match: D7G1W1_ECTSI (Carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1W1_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 2.430e-8
Identity = 39/104 (37.50%), Postives = 50/104 (48.08%), Query Frame = 0 
Query:    1 EKKLESLIDLGNDRFRVLKYETAAAIPFPMTKSIYAWLDLGNLPEEVSKALMNVSTEAAVPPRSGHA-AEKERRATSARFDWVTRWAVEMPDFRRHQIQRACKP 103
            E KL+ L  LG  RFRVLK+E                         V++A+ + S  ++     G A A    ++T   FDW TRWAVEMP FRR Q+Q AC P
Sbjct:  382 ENKLKFLTLLGKQRFRVLKHEM------------------------VTEAIRSTSMRSSAENSPGTAVAGNGSKSTMGGFDWATRWAVEMPTFRRQQVQLACHP 461
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig923.20635.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1W1_ECTSI2.430e-837.50Carbohydrate (N-acetylglucosamine 6-O) sulfotransf... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig923contigF-serratus_M_contig923:141835..143351 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig923.20635.1mRNA_F-serratus_M_contig923.20635.1Fucus serratus malemRNAF-serratus_M_contig923 141835..143353 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig923.20635.1 ID=prot_F-serratus_M_contig923.20635.1|Name=mRNA_F-serratus_M_contig923.20635.1|organism=Fucus serratus male|type=polypeptide|length=103bp
EKKLESLIDLGNDRFRVLKYETAAAIPFPMTKSIYAWLDLGNLPEEVSKA
LMNVSTEAAVPPRSGHAAEKERRATSARFDWVTRWAVEMPDFRRHQIQRA
CKP
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