prot_F-serratus_M_contig920.20610.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig920.20610.1
Unique Nameprot_F-serratus_M_contig920.20610.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length140
Homology
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BLAST of mRNA_F-serratus_M_contig920.20610.1 vs. uniprot
Match: A0A6H5KP28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP28_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 2.320e-35
Identity = 77/151 (50.99%), Postives = 95/151 (62.91%), Query Frame = 0 
Query:    1 WYAGSLVAVLSSLRGKETYVECARNRWIASIYALVFNVHLHSGLVFLPVLLAKGIFRIARHID---RSDPD----------SSTAFGVGDAA-FEWRVFAMVWAFLVVNVALYVNMSHKQLWMWINVSSVLWMLLCLAVLVGSAFAVTPLI 137
            WYAGSLVAV S L GKE+Y +   +RWI S YA V N+ LHSGL  +PVLLAKG+ ++  + +    SD D           S   G+      +W VFA+VW F ++NV  Y+  S  QLWMWINV+SVLWMLLC   LVGS FAV+PLI
Sbjct:  344 WYAGSLVAVSSHLTGKESYFQAEWHRWIISSYAFVANLFLHSGLALMPVLLAKGLHQLVLYDESRGESDDDWNDEWSEWQEESADDGIDQHTNLDWIVFALVWGFFLLNVGFYLTRSQDQLWMWINVTSVLWMLLCGGTLVGSGFAVSPLI 494
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig920.20610.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KP28_9PHAE2.320e-3550.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 116..139
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..52
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 140..140
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 84..104
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 105..115
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 53..83
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availableTMHMMTMhelixcoord: 117..139
NoneNo IPR availableTMHMMTMhelixcoord: 28..50
NoneNo IPR availableTMHMMTMhelixcoord: 80..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig920contigF-serratus_M_contig920:59086..61458 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig920.20610.1mRNA_F-serratus_M_contig920.20610.1Fucus serratus malemRNAF-serratus_M_contig920 59086..61458 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig920.20610.1 ID=prot_F-serratus_M_contig920.20610.1|Name=mRNA_F-serratus_M_contig920.20610.1|organism=Fucus serratus male|type=polypeptide|length=140bp
WYAGSLVAVLSSLRGKETYVECARNRWIASIYALVFNVHLHSGLVFLPVL
LAKGIFRIARHIDRSDPDSSTAFGVGDAAFEWRVFAMVWAFLVVNVALYV
NMSHKQLWMWINVSSVLWMLLCLAVLVGSAFAVTPLIILA
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