prot_F-serratus_M_contig92.20600.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig92.20600.1
Unique Nameprot_F-serratus_M_contig92.20600.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length335
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig92.20600.1 vs. uniprot
Match: D8LTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTK8_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 1.930e-41
Identity = 82/134 (61.19%), Postives = 94/134 (70.15%), Query Frame = 0 
Query:   74 GPRSLQTQY-PECTMPLEDPCTINTTAIGMVEAGYATYYDDTCAAQGYNGCFTQDIPECRTCYLSVEVYMEVTNATEANLPGWGDCPCCVPTTLASDHYDYEVQNFNYSIFGI-AETCTDSPTQAP-AGTPAPS 204
            G RSLQ    P C++P EDPCT+NTTAIGMVE G +TYYD TC A G  GC+T  I ECRTCYLS E+YM+ TNATEA+ P W  CPCCVP TL S H D EV+ FNYS+F I A  CT +PT  P   T AP+
Sbjct:   98 GVRSLQEATDPLCSLPEEDPCTLNTTAIGMVEWGTSTYYDGTCEA-GTQGCYTDGIRECRTCYLSTEIYMDETNATEASRPPWAMCPCCVPATLESGHDDVEVRAFNYSVFTISASDCTITPTFTPLVSTEAPA 230
[Close]
BLAST of mRNA_F-serratus_M_contig92.20600.1 vs. uniprot
Match: A0A6H5KCT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT7_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 2.620e-33
Identity = 61/94 (64.89%), Postives = 71/94 (75.53%), Query Frame = 0 
Query:  102 MVEAGYATYYDDTCAAQGYNGCFTQDIPECRTCYLSVEVYMEVTNATEANLPGWGDCPCCVPTTLASDHYDYEVQNFNYSIFGI-AETCTDSPT 194
            MVE+G +TYYDDTC A G  GC+T  + ECRTCYLS E+YM+ TNATEA+ P W  CPCCVP TL SDH D EV+ FNYS+FGI A  CT +PT
Sbjct:    1 MVESGTSTYYDDTCEA-GIQGCYTDGVRECRTCYLSTEIYMDATNATEASRPPWAMCPCCVPATLQSDHDDIEVKAFNYSVFGISASDCTITPT 93
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig92.20600.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTK8_ECTSI1.930e-4161.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KCT7_9PHAE2.620e-3364.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..23
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 307..328
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 329..334
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..306
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..28
score: 0.652
NoneNo IPR availableTMHMMTMhelixcoord: 309..328
NoneNo IPR availableTMHMMTMhelixcoord: 7..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig92contigF-serratus_M_contig92:691057..726856 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig92.20600.1mRNA_F-serratus_M_contig92.20600.1Fucus serratus malemRNAF-serratus_M_contig92 690022..727357 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig92.20600.1 ID=prot_F-serratus_M_contig92.20600.1|Name=mRNA_F-serratus_M_contig92.20600.1|organism=Fucus serratus male|type=polypeptide|length=335bp
MMPSTASSIWTMTITATVAMLALGGALGKASGSLRAGHFHSPSDWQGWQG
IERVAAESLRSGSEESLGRRYEQGPRSLQTQYPECTMPLEDPCTINTTAI
GMVEAGYATYYDDTCAAQGYNGCFTQDIPECRTCYLSVEVYMEVTNATEA
NLPGWGDCPCCVPTTLASDHYDYEVQNFNYSIFGIAETCTDSPTQAPAGT
PAPSNLLTPEPTMLSETPAPSEALSETPAPSIETPSPQLMSPTPTPSMTS
TATSGRGDVETPTPSSTSTASGTPESTASSSSQGVGTENIEESAGGGDDG
LDTGAKIGIGVGVAVGVVVIGLASFGVLKASGRI*
back to top